RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 Q6ZVH6 145 aa9.7□□□□□ -0.86
CIRBP-243ENST00000593128 IGLV5-48A0A075B6I7 105 aa9.69□□□□□ -0.86
CIRBP-243ENST00000593128 C1orf195Q5TG92 126 aa9.69□□□□□ -0.86
CIRBP-243ENST00000593128 SMIM11BQ8TCY0 68 aa9.69□□□□□ -0.86
CIRBP-243ENST00000593128 HIGD1BQ9P298 99 aa9.69□□□□□ -0.86
CIRBP-243ENST00000593128 TRAV13-2A0A0B4J235 113 aa9.68□□□□□ -0.86
CIRBP-243ENST00000593128 A4D1N5 150 aa9.68□□□□□ -0.86
CIRBP-243ENST00000593128 TSTD3H0UI37 97 aa9.68□□□□□ -0.86
CIRBP-243ENST00000593128 NHP2Q9NX24 153 aaKnown RBP9.68□□□□□ -0.86
CIRBP-243ENST00000593128 LCE2DQ5TA82 110 aaPredicted RBP9.67□□□□□ -0.86
CIRBP-243ENST00000593128 FSIP2Q5CZC0 6907 aa9.67□□□□□ -0.86
CIRBP-243ENST00000593128 F8WEM9 126 aa9.65□□□□□ -0.86
CIRBP-243ENST00000593128 MT1HP80294 61 aa9.64□□□□□ -0.87
CIRBP-243ENST00000593128 KRTAP19-2Q3LHN2 52 aa9.64□□□□□ -0.87
CIRBP-243ENST00000593128 Q5XG85 94 aa9.64□□□□□ -0.87
CIRBP-243ENST00000593128 TCL1BO95988 128 aa9.63□□□□□ -0.87
CIRBP-243ENST00000593128 VAMP3Q15836 100 aa9.63□□□□□ -0.87
CIRBP-243ENST00000593128 HIST1H4GQ99525 98 aa9.62□□□□□ -0.87
CIRBP-243ENST00000593128 RPL37P61927 97 aaKnown RBP9.6□□□□□ -0.87
CIRBP-243ENST00000593128 HSD52Q0P140 79 aa9.59□□□□□ -0.87
CIRBP-243ENST00000593128 CFC1BP0CG36 223 aa9.58□□□□□ -0.88
CIRBP-243ENST00000593128 COX6B2Q6YFQ2 88 aa9.58□□□□□ -0.88
CIRBP-243ENST00000593128 hADV29S1A0JD25 119 aa9.57□□□□□ -0.88
CIRBP-243ENST00000593128 M0R2T5 61 aa9.57□□□□□ -0.88
CIRBP-243ENST00000593128 LINC00575Q6W349 94 aa9.57□□□□□ -0.88
CIRBP-243ENST00000593128 Q6ZQY7 126 aa9.57□□□□□ -0.88
CIRBP-243ENST00000593128 CEND1Q8N111 149 aa9.57□□□□□ -0.88
CIRBP-243ENST00000593128 CRCT1Q9UGL9 99 aa9.55□□□□□ -0.88
CIRBP-243ENST00000593128 PCP4L1A6NKN8 68 aa9.53□□□□□ -0.88
CIRBP-243ENST00000593128 FXYD2P54710 66 aa9.53□□□□□ -0.88
CIRBP-243ENST00000593128 IGFL1Q6UW32 110 aa9.52□□□□□ -0.89
CIRBP-243ENST00000593128 CLEC2BQ92478 149 aa9.52□□□□□ -0.89
CIRBP-243ENST00000593128 BVES-AS1Q5T3Y7 98 aa9.51□□□□□ -0.89
CIRBP-243ENST00000593128 Q6JHZ5 121 aa9.51□□□□□ -0.89
CIRBP-243ENST00000593128 TRBV7-7A0A0K0K1E9 115 aa9.5□□□□□ -0.89
CIRBP-243ENST00000593128 M0R143 59 aa9.5□□□□□ -0.89
CIRBP-243ENST00000593128 TMEM238LA0A1B0GVL6 79 aa9.49□□□□□ -0.89
CIRBP-243ENST00000593128 A6NJY4 79 aa9.49□□□□□ -0.89
CIRBP-243ENST00000593128 KRTAP10-6P60371 365 aaPredicted RBP9.49□□□□□ -0.89
CIRBP-243ENST00000593128 OCIAD2Q56VL3 154 aa9.49□□□□□ -0.89
CIRBP-243ENST00000593128 OBSCN-AS1Q96MR7 158 aa9.48□□□□□ -0.89
CIRBP-243ENST00000593128 CFC1P0CG37 223 aa9.47□□□□□ -0.89
CIRBP-243ENST00000593128 SNHG12Q9BXW3 62 aa9.47□□□□□ -0.89
CIRBP-243ENST00000593128 LORP23490 312 aaPredicted RBP9.46□□□□□ -0.9
CIRBP-243ENST00000593128 Q6Q795 121 aa9.46□□□□□ -0.9
CIRBP-243ENST00000593128 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.46□□□□□ -0.9
CIRBP-243ENST00000593128 A0A0B4J2C4 111 aa9.45□□□□□ -0.9
CIRBP-243ENST00000593128 H3BUT2 72 aa9.45□□□□□ -0.9
CIRBP-243ENST00000593128 BATFQ16520 125 aa9.44□□□□□ -0.9
CIRBP-243ENST00000593128 RAB37Q96AX2 223 aa9.44□□□□□ -0.9
CIRBP-243ENST00000593128 ATP11AUNQ6ZP68 121 aa9.43□□□□□ -0.9
CIRBP-243ENST00000593128 K7ERJ3 54 aa9.42□□□□□ -0.9
CIRBP-243ENST00000593128 LST1O00453 97 aa9.42□□□□□ -0.9
CIRBP-243ENST00000593128 FLGP20930 4061 aaPredicted RBP9.41□□□□□ -0.9
CIRBP-243ENST00000593128 PRO1854Q9UHT4 67 aa9.4□□□□□ -0.9
CIRBP-243ENST00000593128 PPDPFLQ8WWR9 84 aa9.39□□□□□ -0.91
CIRBP-243ENST00000593128 Q96NJ1 140 aa9.38□□□□□ -0.91
CIRBP-243ENST00000593128 Q75L30 129 aa9.37□□□□□ -0.91
CIRBP-243ENST00000593128 SNCGO76070 127 aa9.35□□□□□ -0.91
CIRBP-243ENST00000593128 SS18L2Q9UHA2 77 aa9.34□□□□□ -0.91
CIRBP-243ENST00000593128 COL5A1-AS1Q5SY13 56 aa9.31□□□□□ -0.92
CIRBP-243ENST00000593128 TAX1BP3O14907 124 aa9.3□□□□□ -0.92
CIRBP-243ENST00000593128 NDUFV3P56181 108 aaKnown RBP9.3□□□□□ -0.92
CIRBP-243ENST00000593128 FAM218AQ96MZ4 157 aa9.3□□□□□ -0.92
CIRBP-243ENST00000593128 A0A087WSZ3 146 aa9.29□□□□□ -0.92
CIRBP-243ENST00000593128 H0YGX0 51 aa9.29□□□□□ -0.92
CIRBP-243ENST00000593128 TEN1Q86WV5 123 aa9.29□□□□□ -0.92
CIRBP-243ENST00000593128 FABP2P12104 132 aa9.28□□□□□ -0.92
CIRBP-243ENST00000593128 NAA38Q9BRA0 125 aaKnown RBP9.28□□□□□ -0.92
CIRBP-243ENST00000593128 TRIAP1O43715 76 aa9.27□□□□□ -0.93
CIRBP-243ENST00000593128 PSMB2P49721 201 aa9.27□□□□□ -0.93
CIRBP-243ENST00000593128 C9orf118A6NHY6 69 aa9.26□□□□□ -0.93
CIRBP-243ENST00000593128 H3BMG7 143 aa9.26□□□□□ -0.93
CIRBP-243ENST00000593128 DSCR10P59022 87 aa9.25□□□□□ -0.93
CIRBP-243ENST00000593128 A0A1B0GV72 72 aa9.23□□□□□ -0.93
CIRBP-243ENST00000593128 COX6CP09669 75 aa9.23□□□□□ -0.93
CIRBP-243ENST00000593128 C20orf166-AS1Q96NR2 134 aa9.23□□□□□ -0.93
CIRBP-243ENST00000593128 SIGMAR1Q99720 223 aa9.23□□□□□ -0.93
CIRBP-243ENST00000593128 TRBV20-1A0A075B6N2 111 aa9.22□□□□□ -0.93
CIRBP-243ENST00000593128 SCGB1C2P0DMR2 95 aa9.22□□□□□ -0.93
CIRBP-243ENST00000593128 A8MUU9 505 aa9.21□□□□□ -0.94
CIRBP-243ENST00000593128 GHRHP01286 108 aa9.2□□□□□ -0.94
CIRBP-243ENST00000593128 A0A1W2PPM0 123 aa9.19□□□□□ -0.94
CIRBP-243ENST00000593128 LYRM7Q5U5X0 104 aa9.18□□□□□ -0.94
CIRBP-243ENST00000593128 A0A1B0GX51 115 aa9.16□□□□□ -0.94
CIRBP-243ENST00000593128 A0A1W2PNM2 257 aa9.16□□□□□ -0.94
CIRBP-243ENST00000593128 DNAL4O96015 105 aa9.15□□□□□ -0.94
CIRBP-243ENST00000593128 IGKV4-1P06312 121 aa9.15□□□□□ -0.94
CIRBP-243ENST00000593128 LINC00313P59037 77 aa9.14□□□□□ -0.95
CIRBP-243ENST00000593128 ANKRD29Q8N6D5 301 aa9.14□□□□□ -0.95
CIRBP-243ENST00000593128 FAM236DA0A1B0GTK5 79 aa9.13□□□□□ -0.95
CIRBP-243ENST00000593128 FAM236CP0DP71 79 aa9.13□□□□□ -0.95
CIRBP-243ENST00000593128 DEFB116Q30KQ4 102 aa9.12□□□□□ -0.95
CIRBP-243ENST00000593128 TRACP01848 142 aa9.11□□□□□ -0.95
CIRBP-243ENST00000593128 ATXN8Q156A1 80 aa9.11□□□□□ -0.95
CIRBP-243ENST00000593128 ORMDL1Q9P0S3 153 aa9.11□□□□□ -0.95
CIRBP-243ENST00000593128 SPCS1Q9Y6A9 102 aa9.11□□□□□ -0.95
CIRBP-243ENST00000593128 TRBV7-4A0A0J9YYF1 115 aa9.07□□□□□ -0.96
CIRBP-243ENST00000593128 K7EP34 96 aa9.07□□□□□ -0.96
CIRBP-243ENST00000593128 CCKP06307 115 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms