RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 BAHCC1Q9P281 2608 aa9.39□□□□□ -0.91
SMARCA4-219ENST00000592604 IGLV8-61A0A075B6I0 122 aa9.38□□□□□ -0.91
SMARCA4-219ENST00000592604 DNAH3Q8TD57 4116 aa9.38□□□□□ -0.91
SMARCA4-219ENST00000592604 SPTSSBQ8NFR3 76 aa9.38□□□□□ -0.91
SMARCA4-219ENST00000592604 C1orf64Q8NEQ6 169 aa9.36□□□□□ -0.91
SMARCA4-219ENST00000592604 TRAV22A0A0B4J277 110 aa9.35□□□□□ -0.91
SMARCA4-219ENST00000592604 A0A0G2JQZ4 141 aa9.35□□□□□ -0.91
SMARCA4-219ENST00000592604 A0A1W2PNN7 141 aa9.35□□□□□ -0.91
SMARCA4-219ENST00000592604 NDUFS5O43920 106 aa9.35□□□□□ -0.91
SMARCA4-219ENST00000592604 CYP4F30PQ9H0H9 118 aa9.35□□□□□ -0.91
SMARCA4-219ENST00000592604 C16orf90A8MZG2 172 aa9.32□□□□□ -0.92
SMARCA4-219ENST00000592604 A8MUN3 132 aa9.32□□□□□ -0.92
SMARCA4-219ENST00000592604 PRLHP81277 87 aa9.32□□□□□ -0.92
SMARCA4-219ENST00000592604 A0A087WSZ3 146 aa9.32□□□□□ -0.92
SMARCA4-219ENST00000592604 A0A096LNI7 61 aa9.32□□□□□ -0.92
SMARCA4-219ENST00000592604 F8P00451 2351 aa9.31□□□□□ -0.92
SMARCA4-219ENST00000592604 NDUFB1O75438 58 aa9.31□□□□□ -0.92
SMARCA4-219ENST00000592604 DEFB116Q30KQ4 102 aa9.31□□□□□ -0.92
SMARCA4-219ENST00000592604 KRTAP24-1Q3LI83 254 aa9.3□□□□□ -0.92
SMARCA4-219ENST00000592604 KRTAP29-1A8MX34 341 aaPredicted RBP9.29□□□□□ -0.92
SMARCA4-219ENST00000592604 CNBPP62633 177 aaKnown RBP9.29□□□□□ -0.92
SMARCA4-219ENST00000592604 WFDC13Q8IUB5 93 aa9.29□□□□□ -0.92
SMARCA4-219ENST00000592604 MDFIQ99750 246 aa9.29□□□□□ -0.92
SMARCA4-219ENST00000592604 MP68P56378 58 aa9.28□□□□□ -0.92
SMARCA4-219ENST00000592604 IGKV2-24A0A0C4DH68 120 aa9.27□□□□□ -0.93
SMARCA4-219ENST00000592604 PHF5AQ7RTV0 110 aaKnown RBP9.27□□□□□ -0.93
SMARCA4-219ENST00000592604 SPRR1BP22528 89 aa9.26□□□□□ -0.93
SMARCA4-219ENST00000592604 UBE2AP49459 152 aa9.26□□□□□ -0.93
SMARCA4-219ENST00000592604 RPL37AP61513 92 aaKnown RBP9.25□□□□□ -0.93
SMARCA4-219ENST00000592604 MAST4O15021 2626 aa9.24□□□□□ -0.93
SMARCA4-219ENST00000592604 H0Y9J4 135 aa9.24□□□□□ -0.93
SMARCA4-219ENST00000592604 LCA10Q71F78 164 aa9.24□□□□□ -0.93
SMARCA4-219ENST00000592604 STAB1Q9NY15 2570 aa9.24□□□□□ -0.93
SMARCA4-219ENST00000592604 HUWE1Q7Z6Z7 4374 aaKnown RBP9.23□□□□□ -0.93
SMARCA4-219ENST00000592604 KRTAP1-5Q9BYS1 174 aa9.23□□□□□ -0.93
SMARCA4-219ENST00000592604 A6NN06 94 aa9.23□□□□□ -0.93
SMARCA4-219ENST00000592604 H3BPC8 53 aa9.23□□□□□ -0.93
SMARCA4-219ENST00000592604 PRR4Q16378 134 aa9.23□□□□□ -0.93
SMARCA4-219ENST00000592604 CHKB-CPT1BH3BT56 60 aa9.22□□□□□ -0.93
SMARCA4-219ENST00000592604 C7orf65Q6ZTY9 151 aa9.22□□□□□ -0.93
SMARCA4-219ENST00000592604 LINC00208Q96KT6 92 aa9.22□□□□□ -0.93
SMARCA4-219ENST00000592604 LINC00472Q9H8W2 130 aa9.22□□□□□ -0.93
SMARCA4-219ENST00000592604 Q5VV11 94 aa9.21□□□□□ -0.93
SMARCA4-219ENST00000592604 CASC2Q6XLA1 102 aa9.21□□□□□ -0.93
SMARCA4-219ENST00000592604 KRTAP11-1Q8IUC1 163 aa9.21□□□□□ -0.93
SMARCA4-219ENST00000592604 PRB2P02812 416 aaPredicted RBP9.21□□□□□ -0.94
SMARCA4-219ENST00000592604 A8MWP4 228 aa9.2□□□□□ -0.94
SMARCA4-219ENST00000592604 SPANXA2-OT1Q8N9U9 137 aa9.2□□□□□ -0.94
SMARCA4-219ENST00000592604 NOTCH1P46531 2555 aa9.2□□□□□ -0.94
SMARCA4-219ENST00000592604 DNAH10Q8IVF4 4471 aa9.2□□□□□ -0.94
SMARCA4-219ENST00000592604 ATP11AUNQ6ZP68 121 aa9.19□□□□□ -0.94
SMARCA4-219ENST00000592604 B9D2Q9BPU9 175 aa9.19□□□□□ -0.94
SMARCA4-219ENST00000592604 FBN1P35555 2871 aaKnown RBP9.19□□□□□ -0.94
SMARCA4-219ENST00000592604 H0Y9P7 68 aa9.18□□□□□ -0.94
SMARCA4-219ENST00000592604 K7EIL1 84 aa9.17□□□□□ -0.94
SMARCA4-219ENST00000592604 C14orf177Q52M58 125 aa9.17□□□□□ -0.94
SMARCA4-219ENST00000592604 CHTF8P0CG12 524 aa9.16□□□□□ -0.94
SMARCA4-219ENST00000592604 DNAH9Q9NYC9 4486 aa9.13□□□□□ -0.95
SMARCA4-219ENST00000592604 C9orf163Q8N9P6 203 aa9.12□□□□□ -0.95
SMARCA4-219ENST00000592604 SRRM2Q9UQ35 2752 aaKnown RBP9.11□□□□□ -0.95
SMARCA4-219ENST00000592604 MMP24-AS1A0A0U1RRL7 71 aa9.11□□□□□ -0.95
SMARCA4-219ENST00000592604 NBEAL1Q6ZS30 2694 aa9.1□□□□□ -0.95
SMARCA4-219ENST00000592604 KRTAP13-1Q8IUC0 172 aa9.1□□□□□ -0.95
SMARCA4-219ENST00000592604 APLNQ9ULZ1 77 aa9.08□□□□□ -0.96
SMARCA4-219ENST00000592604 UBE2DNLQ8IWF7 75 aa9.08□□□□□ -0.96
SMARCA4-219ENST00000592604 LYSTQ99698 3801 aa9.08□□□□□ -0.96
SMARCA4-219ENST00000592604 A6NED7 52 aa9.08□□□□□ -0.96
SMARCA4-219ENST00000592604 PRR15LQ9BU68 103 aa9.07□□□□□ -0.96
SMARCA4-219ENST00000592604 Q8N9P0 234 aaPredicted RBP9.07□□□□□ -0.96
SMARCA4-219ENST00000592604 COL6A5A8TX70 2615 aa9.06□□□□□ -0.96
SMARCA4-219ENST00000592604 LINC00313P59037 77 aa9.06□□□□□ -0.96
SMARCA4-219ENST00000592604 ASB16-AS1Q495Z4 193 aa9.06□□□□□ -0.96
SMARCA4-219ENST00000592604 LINC01554Q52M75 96 aa9.05□□□□□ -0.96
SMARCA4-219ENST00000592604 PRAC1Q96KF2 57 aa9.04□□□□□ -0.96
SMARCA4-219ENST00000592604 Q96NJ1 140 aa9.04□□□□□ -0.96
SMARCA4-219ENST00000592604 LIMD2Q9BT23 127 aa9.04□□□□□ -0.96
SMARCA4-219ENST00000592604 IGLV7-46A0A075B6I9 117 aa9.04□□□□□ -0.96
SMARCA4-219ENST00000592604 PANO1I0J062 215 aa9.02□□□□□ -0.97
SMARCA4-219ENST00000592604 TP53AIP1Q9HCN2 124 aa9.02□□□□□ -0.97
SMARCA4-219ENST00000592604 DYNC2H1Q8NCM8 4307 aaKnown RBP9.02□□□□□ -0.97
SMARCA4-219ENST00000592604 MOBPQ13875 183 aa9.01□□□□□ -0.97
SMARCA4-219ENST00000592604 STAB2Q8WWQ8 2551 aa8.99□□□□□ -0.97
SMARCA4-219ENST00000592604 TENM2Q9NT68 2774 aa8.98□□□□□ -0.97
SMARCA4-219ENST00000592604 LINC00483Q53H64 154 aa8.98□□□□□ -0.97
SMARCA4-219ENST00000592604 COA5Q86WW8 74 aa8.98□□□□□ -0.97
SMARCA4-219ENST00000592604 Q6ZR54 194 aa8.98□□□□□ -0.97
SMARCA4-219ENST00000592604 Q6ZRN7 208 aaPredicted RBP8.98□□□□□ -0.97
SMARCA4-219ENST00000592604 C8orf17Q9NRJ1 99 aa8.98□□□□□ -0.97
SMARCA4-219ENST00000592604 IGLV9-49A0A0B4J1Y8 123 aa8.97□□□□□ -0.97
SMARCA4-219ENST00000592604 NBDYA0A0U1RRE5 68 aa8.97□□□□□ -0.97
SMARCA4-219ENST00000592604 CDC42SE1Q9NRR8 79 aa8.96□□□□□ -0.97
SMARCA4-219ENST00000592604 SPACA4Q8TDM5 124 aa8.95□□□□□ -0.98
SMARCA4-219ENST00000592604 COL7A1Q02388 2944 aa8.95□□□□□ -0.98
SMARCA4-219ENST00000592604 LOC101927531A0A1B0GV80 90 aa8.94□□□□□ -0.98
SMARCA4-219ENST00000592604 DNAH7Q8WXX0 4024 aa8.94□□□□□ -0.98
SMARCA4-219ENST00000592604 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.94□□□□□ -0.98
SMARCA4-219ENST00000592604 PCOTHQ58A44 107 aa8.93□□□□□ -0.98
SMARCA4-219ENST00000592604 Q75L30 129 aa8.93□□□□□ -0.98
SMARCA4-219ENST00000592604 A0A1B0GVX0 72 aa8.93□□□□□ -0.98
SMARCA4-219ENST00000592604 CSMD3Q7Z407 3707 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms