RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 KRTAP1-5Q9BYS1 174 aa7.73□□□□□ -1.17
PDE4A-207ENST00000590407 H3BPC8 53 aa7.72□□□□□ -1.17
PDE4A-207ENST00000590407 UBE2AP49459 152 aa7.72□□□□□ -1.17
PDE4A-207ENST00000590407 HUWE1Q7Z6Z7 4374 aaKnown RBP7.72□□□□□ -1.17
PDE4A-207ENST00000590407 F8P00451 2351 aa7.71□□□□□ -1.18
PDE4A-207ENST00000590407 IGKV2-24A0A0C4DH68 120 aa7.71□□□□□ -1.18
PDE4A-207ENST00000590407 C1orf64Q8NEQ6 169 aa7.71□□□□□ -1.18
PDE4A-207ENST00000590407 MP68P56378 58 aa7.7□□□□□ -1.18
PDE4A-207ENST00000590407 Q1T7F1 81 aa7.7□□□□□ -1.18
PDE4A-207ENST00000590407 PRR15Q8IV56 129 aa7.69□□□□□ -1.18
PDE4A-207ENST00000590407 A0A0G2JQZ4 141 aa7.69□□□□□ -1.18
PDE4A-207ENST00000590407 TRAV22A0A0B4J277 110 aa7.68□□□□□ -1.18
PDE4A-207ENST00000590407 A8MWP4 228 aa7.68□□□□□ -1.18
PDE4A-207ENST00000590407 MPLKIPQ8TAP9 179 aa7.68□□□□□ -1.18
PDE4A-207ENST00000590407 LINC00472Q9H8W2 130 aa7.68□□□□□ -1.18
PDE4A-207ENST00000590407 C9orf163Q8N9P6 203 aa7.67□□□□□ -1.18
PDE4A-207ENST00000590407 SPANXA2-OT1Q8N9U9 137 aa7.67□□□□□ -1.18
PDE4A-207ENST00000590407 PHF5AQ7RTV0 110 aaKnown RBP7.66□□□□□ -1.18
PDE4A-207ENST00000590407 WFDC13Q8IUB5 93 aa7.66□□□□□ -1.18
PDE4A-207ENST00000590407 APLNQ9ULZ1 77 aa7.66□□□□□ -1.18
PDE4A-207ENST00000590407 PRB2P02812 416 aaPredicted RBP7.66□□□□□ -1.18
PDE4A-207ENST00000590407 KRTAP11-1Q8IUC1 163 aa7.66□□□□□ -1.18
PDE4A-207ENST00000590407 STAB1Q9NY15 2570 aa7.65□□□□□ -1.18
PDE4A-207ENST00000590407 DEFB116Q30KQ4 102 aa7.65□□□□□ -1.18
PDE4A-207ENST00000590407 CASC2Q6XLA1 102 aa7.65□□□□□ -1.18
PDE4A-207ENST00000590407 B9D2Q9BPU9 175 aa7.65□□□□□ -1.18
PDE4A-207ENST00000590407 KRTAP13-1Q8IUC0 172 aa7.64□□□□□ -1.19
PDE4A-207ENST00000590407 UBE2DNLQ8IWF7 75 aa7.64□□□□□ -1.19
PDE4A-207ENST00000590407 FBN1P35555 2871 aaKnown RBP7.63□□□□□ -1.19
PDE4A-207ENST00000590407 LRCOL1A6NCL2 159 aa7.62□□□□□ -1.19
PDE4A-207ENST00000590407 CHTF8P0CG12 524 aa7.62□□□□□ -1.19
PDE4A-207ENST00000590407 RPL37AP61513 92 aaKnown RBP7.62□□□□□ -1.19
PDE4A-207ENST00000590407 BRK1Q8WUW1 75 aa7.62□□□□□ -1.19
PDE4A-207ENST00000590407 H0Y9P7 68 aa7.61□□□□□ -1.19
PDE4A-207ENST00000590407 DYNC2H1Q8NCM8 4307 aaKnown RBP7.61□□□□□ -1.19
PDE4A-207ENST00000590407 LINC00208Q96KT6 92 aa7.61□□□□□ -1.19
PDE4A-207ENST00000590407 V9GYY9 64 aa7.61□□□□□ -1.19
PDE4A-207ENST00000590407 NOTCH1P46531 2555 aa7.6□□□□□ -1.19
PDE4A-207ENST00000590407 MMP24-AS1A0A0U1RRL7 71 aa7.58□□□□□ -1.2
PDE4A-207ENST00000590407 ASB16-AS1Q495Z4 193 aa7.58□□□□□ -1.2
PDE4A-207ENST00000590407 DNAH10Q8IVF4 4471 aa7.56□□□□□ -1.2
PDE4A-207ENST00000590407 LINC00483Q53H64 154 aa7.56□□□□□ -1.2
PDE4A-207ENST00000590407 Q6ZRN7 208 aaPredicted RBP7.56□□□□□ -1.2
PDE4A-207ENST00000590407 NBDYA0A0U1RRE5 68 aa7.56□□□□□ -1.2
PDE4A-207ENST00000590407 MOBPQ13875 183 aa7.54□□□□□ -1.2
PDE4A-207ENST00000590407 TP53AIP1Q9HCN2 124 aa7.54□□□□□ -1.2
PDE4A-207ENST00000590407 PRR4Q16378 134 aa7.54□□□□□ -1.2
PDE4A-207ENST00000590407 SPACA4Q8TDM5 124 aa7.54□□□□□ -1.2
PDE4A-207ENST00000590407 Q96NJ1 140 aa7.54□□□□□ -1.2
PDE4A-207ENST00000590407 DNAH9Q9NYC9 4486 aa7.53□□□□□ -1.2
PDE4A-207ENST00000590407 NBEAL1Q6ZS30 2694 aa7.53□□□□□ -1.2
PDE4A-207ENST00000590407 C1orf195Q5TG92 126 aa7.53□□□□□ -1.2
PDE4A-207ENST00000590407 PANO1I0J062 215 aa7.51□□□□□ -1.21
PDE4A-207ENST00000590407 ZNF706Q9Y5V0 76 aaPredicted RBP7.51□□□□□ -1.21
PDE4A-207ENST00000590407 IGLV7-46A0A075B6I9 117 aa7.51□□□□□ -1.21
PDE4A-207ENST00000590407 NUPR2A6NF83 97 aa7.51□□□□□ -1.21
PDE4A-207ENST00000590407 Q6ZR54 194 aa7.49□□□□□ -1.21
PDE4A-207ENST00000590407 LIMD2Q9BT23 127 aa7.49□□□□□ -1.21
PDE4A-207ENST00000590407 C8orf17Q9NRJ1 99 aa7.48□□□□□ -1.21
PDE4A-207ENST00000590407 Q8N9P0 234 aaPredicted RBP7.47□□□□□ -1.21
PDE4A-207ENST00000590407 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.47□□□□□ -1.21
PDE4A-207ENST00000590407 STAB2Q8WWQ8 2551 aa7.47□□□□□ -1.21
PDE4A-207ENST00000590407 PSPHP1O15172 72 aa7.46□□□□□ -1.21
PDE4A-207ENST00000590407 WWC2-AS2Q96NR7 200 aa7.46□□□□□ -1.21
PDE4A-207ENST00000590407 MDFIQ99750 246 aa7.46□□□□□ -1.21
PDE4A-207ENST00000590407 A0A1B0GVX0 72 aa7.46□□□□□ -1.22
PDE4A-207ENST00000590407 COL6A5A8TX70 2615 aa7.45□□□□□ -1.22
PDE4A-207ENST00000590407 Q5VV11 94 aa7.45□□□□□ -1.22
PDE4A-207ENST00000590407 IGLV9-49A0A0B4J1Y8 123 aa7.44□□□□□ -1.22
PDE4A-207ENST00000590407 A8MUN3 132 aa7.44□□□□□ -1.22
PDE4A-207ENST00000590407 LYSTQ99698 3801 aa7.43□□□□□ -1.22
PDE4A-207ENST00000590407 A0A087WTM6 91 aa7.43□□□□□ -1.22
PDE4A-207ENST00000590407 IGLV5-52A0A0A0MRZ9 124 aa7.43□□□□□ -1.22
PDE4A-207ENST00000590407 COA5Q86WW8 74 aa7.43□□□□□ -1.22
PDE4A-207ENST00000590407 PLAC8Q9NZF1 115 aa7.43□□□□□ -1.22
PDE4A-207ENST00000590407 LOC101927531A0A1B0GV80 90 aa7.41□□□□□ -1.22
PDE4A-207ENST00000590407 ZNF861PO60384 105 aa7.41□□□□□ -1.22
PDE4A-207ENST00000590407 MGAM2Q2M2H8 2515 aa7.4□□□□□ -1.22
PDE4A-207ENST00000590407 CDK2AP2O75956 126 aa7.4□□□□□ -1.23
PDE4A-207ENST00000590407 MRPL34Q9BQ48 92 aaKnown RBP7.4□□□□□ -1.23
PDE4A-207ENST00000590407 PSORS1C2Q9UIG4 136 aa7.4□□□□□ -1.23
PDE4A-207ENST00000590407 VPS13DQ5THJ4 4388 aa7.4□□□□□ -1.23
PDE4A-207ENST00000590407 SRRM2Q9UQ35 2752 aaKnown RBP7.4□□□□□ -1.23
PDE4A-207ENST00000590407 DNHD1Q96M86 4753 aa7.4□□□□□ -1.23
PDE4A-207ENST00000590407 CD164Q04900 197 aa7.39□□□□□ -1.23
PDE4A-207ENST00000590407 Q75L30 129 aa7.38□□□□□ -1.23
PDE4A-207ENST00000590407 PLECQ15149 4684 aaKnown RBP7.38□□□□□ -1.23
PDE4A-207ENST00000590407 COL7A1Q02388 2944 aa7.38□□□□□ -1.23
PDE4A-207ENST00000590407 IGHV6-1A0A0B4J1U7 121 aa7.37□□□□□ -1.23
PDE4A-207ENST00000590407 RTL8CO15255 209 aa7.37□□□□□ -1.23
PDE4A-207ENST00000590407 PCOTHQ58A44 107 aa7.35□□□□□ -1.23
PDE4A-207ENST00000590407 PRR15LQ9BU68 103 aa7.35□□□□□ -1.23
PDE4A-207ENST00000590407 CHKB-CPT1BH3BT56 60 aa7.34□□□□□ -1.23
PDE4A-207ENST00000590407 LINC01558Q9Y6Z2 57 aa7.34□□□□□ -1.23
PDE4A-207ENST00000590407 DNAH7Q8WXX0 4024 aa7.33□□□□□ -1.24
PDE4A-207ENST00000590407 DNAH17Q9UFH2 4485 aa7.33□□□□□ -1.24
PDE4A-207ENST00000590407 TENM2Q9NT68 2774 aa7.33□□□□□ -1.24
PDE4A-207ENST00000590407 NDUFS5O43920 106 aa7.32□□□□□ -1.24
PDE4A-207ENST00000590407 PMAIP1Q13794 54 aa7.31□□□□□ -1.24
PDE4A-207ENST00000590407 KRTAP13-3Q3SY46 172 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms