RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 ATP11AUNQ6ZP68 121 aa9.72□□□□□ -0.85
CIRBP-228ENST00000590347 NDUFB1O75438 58 aa9.72□□□□□ -0.85
CIRBP-228ENST00000590347 OXLD1Q5BKU9 147 aa9.72□□□□□ -0.85
CIRBP-228ENST00000590347 COA5Q86WW8 74 aa9.72□□□□□ -0.85
CIRBP-228ENST00000590347 MOBPQ13875 183 aa9.71□□□□□ -0.85
CIRBP-228ENST00000590347 LYRM9A8MSI8 78 aa9.71□□□□□ -0.86
CIRBP-228ENST00000590347 ADM2Q7Z4H4 148 aa9.71□□□□□ -0.86
CIRBP-228ENST00000590347 C15orf56Q8N910 161 aa9.71□□□□□ -0.86
CIRBP-228ENST00000590347 PRR34Q9NV39 138 aa9.71□□□□□ -0.86
CIRBP-228ENST00000590347 CMC4P56277 68 aaPredicted RBP9.7□□□□□ -0.86
CIRBP-228ENST00000590347 SPINK7P58062 85 aa9.7□□□□□ -0.86
CIRBP-228ENST00000590347 EGFEM1PQ0D2K5 195 aa9.7□□□□□ -0.86
CIRBP-228ENST00000590347 IGKV2D-24A0A075B6R9 120 aa9.7□□□□□ -0.86
CIRBP-228ENST00000590347 LELP1Q5T871 98 aa9.7□□□□□ -0.86
CIRBP-228ENST00000590347 NBEAL1Q6ZS30 2694 aa9.69□□□□□ -0.86
CIRBP-228ENST00000590347 A0A096LNI7 61 aa9.69□□□□□ -0.86
CIRBP-228ENST00000590347 LINC00476Q8WZB0 136 aa9.69□□□□□ -0.86
CIRBP-228ENST00000590347 TENM3Q9P273 2699 aa9.68□□□□□ -0.86
CIRBP-228ENST00000590347 C8orf87E5RJ46 101 aa9.67□□□□□ -0.86
CIRBP-228ENST00000590347 Q6ZRX8 168 aa9.67□□□□□ -0.86
CIRBP-228ENST00000590347 TNP2Q05952 138 aa9.66□□□□□ -0.86
CIRBP-228ENST00000590347 C7orf65Q6ZTY9 151 aa9.66□□□□□ -0.86
CIRBP-228ENST00000590347 KCNQ1DNQ9H478 68 aa9.66□□□□□ -0.86
CIRBP-228ENST00000590347 NDUFS5O43920 106 aa9.65□□□□□ -0.86
CIRBP-228ENST00000590347 MGAM2Q2M2H8 2515 aa9.65□□□□□ -0.86
CIRBP-228ENST00000590347 CASC2Q6XLA1 102 aa9.65□□□□□ -0.86
CIRBP-228ENST00000590347 Q75L30 129 aa9.65□□□□□ -0.87
CIRBP-228ENST00000590347 SPRR4Q96PI1 79 aa9.64□□□□□ -0.87
CIRBP-228ENST00000590347 IGFL1Q6UW32 110 aa9.63□□□□□ -0.87
CIRBP-228ENST00000590347 LOC101927531A0A1B0GV80 90 aa9.63□□□□□ -0.87
CIRBP-228ENST00000590347 H3BS24 57 aa9.62□□□□□ -0.87
CIRBP-228ENST00000590347 CDC42SE1Q9NRR8 79 aa9.62□□□□□ -0.87
CIRBP-228ENST00000590347 PHF5AQ7RTV0 110 aaKnown RBP9.62□□□□□ -0.87
CIRBP-228ENST00000590347 PRLHP81277 87 aa9.61□□□□□ -0.87
CIRBP-228ENST00000590347 DHRS4-AS1Q9P1J3 65 aa9.6□□□□□ -0.87
CIRBP-228ENST00000590347 LINC00313P59037 77 aa9.59□□□□□ -0.87
CIRBP-228ENST00000590347 KRTAP24-1Q3LI83 254 aa9.59□□□□□ -0.87
CIRBP-228ENST00000590347 MDFIQ99750 246 aa9.59□□□□□ -0.87
CIRBP-228ENST00000590347 H0Y9J4 135 aa9.58□□□□□ -0.88
CIRBP-228ENST00000590347 KRTAP26-1Q6PEX3 210 aa9.58□□□□□ -0.88
CIRBP-228ENST00000590347 CNBPP62633 177 aaKnown RBP9.57□□□□□ -0.88
CIRBP-228ENST00000590347 ANK2Q01484 3957 aa9.57□□□□□ -0.88
CIRBP-228ENST00000590347 CASC10Q5T4H9 136 aa9.56□□□□□ -0.88
CIRBP-228ENST00000590347 KRTAP10-11P60412 298 aa9.55□□□□□ -0.88
CIRBP-228ENST00000590347 KRTAP7-1Q8IUC3 87 aa9.55□□□□□ -0.88
CIRBP-228ENST00000590347 KRTAP29-1A8MX34 341 aaPredicted RBP9.55□□□□□ -0.88
CIRBP-228ENST00000590347 C9orf163Q8N9P6 203 aa9.54□□□□□ -0.88
CIRBP-228ENST00000590347 IGLV1-50A0A075B6I6 118 aa9.54□□□□□ -0.88
CIRBP-228ENST00000590347 KRTAP4-16G5E9R7 235 aaPredicted RBP9.54□□□□□ -0.88
CIRBP-228ENST00000590347 SPART-AS1P0CW21 52 aa9.53□□□□□ -0.88
CIRBP-228ENST00000590347 SPANXA2-OT1Q8N9U9 137 aa9.53□□□□□ -0.88
CIRBP-228ENST00000590347 Q8NAQ8 132 aa9.53□□□□□ -0.88
CIRBP-228ENST00000590347 PRR26Q8N8Z3 221 aa9.51□□□□□ -0.89
CIRBP-228ENST00000590347 TENM2Q9NT68 2774 aa9.51□□□□□ -0.89
CIRBP-228ENST00000590347 IGKV2-24A0A0C4DH68 120 aa9.49□□□□□ -0.89
CIRBP-228ENST00000590347 A0A1B0GW54 56 aa9.46□□□□□ -0.9
CIRBP-228ENST00000590347 IGLV7-46A0A075B6I9 117 aa9.45□□□□□ -0.9
CIRBP-228ENST00000590347 HRES1P13985 223 aa9.44□□□□□ -0.9
CIRBP-228ENST00000590347 LINC01558Q9Y6Z2 57 aa9.44□□□□□ -0.9
CIRBP-228ENST00000590347 REG3GQ6UW15 175 aa9.43□□□□□ -0.9
CIRBP-228ENST00000590347 SPRR1AP35321 89 aa9.42□□□□□ -0.9
CIRBP-228ENST00000590347 IGLV5-37A0A075B6J1 123 aa9.4□□□□□ -0.9
CIRBP-228ENST00000590347 STAB2Q8WWQ8 2551 aa9.4□□□□□ -0.9
CIRBP-228ENST00000590347 K7EIL1 84 aa9.4□□□□□ -0.9
CIRBP-228ENST00000590347 A8MWP4 228 aa9.4□□□□□ -0.91
CIRBP-228ENST00000590347 MMP24-AS1A0A0U1RRL7 71 aa9.38□□□□□ -0.91
CIRBP-228ENST00000590347 LINC01554Q52M75 96 aa9.37□□□□□ -0.91
CIRBP-228ENST00000590347 H3BPC8 53 aa9.36□□□□□ -0.91
CIRBP-228ENST00000590347 PLAC8Q9NZF1 115 aa9.34□□□□□ -0.91
CIRBP-228ENST00000590347 LINC00472Q9H8W2 130 aa9.34□□□□□ -0.91
CIRBP-228ENST00000590347 IGHV6-1A0A0B4J1U7 121 aa9.33□□□□□ -0.92
CIRBP-228ENST00000590347 KRTAP11-1Q8IUC1 163 aa9.32□□□□□ -0.92
CIRBP-228ENST00000590347 DNAH10Q8IVF4 4471 aa9.32□□□□□ -0.92
CIRBP-228ENST00000590347 DEFB131BA0A096LNP1 70 aa9.32□□□□□ -0.92
CIRBP-228ENST00000590347 LYSTQ99698 3801 aa9.3□□□□□ -0.92
CIRBP-228ENST00000590347 CHTF8P0CG12 524 aa9.29□□□□□ -0.92
CIRBP-228ENST00000590347 IGLV9-49A0A0B4J1Y8 123 aa9.29□□□□□ -0.92
CIRBP-228ENST00000590347 CMYA5Q8N3K9 4069 aa9.28□□□□□ -0.92
CIRBP-228ENST00000590347 A0A087X002 238 aa9.28□□□□□ -0.92
CIRBP-228ENST00000590347 NOTCH2NLQ7Z3S9 236 aa9.28□□□□□ -0.92
CIRBP-228ENST00000590347 CSAG1Q6PB30 78 aa9.27□□□□□ -0.93
CIRBP-228ENST00000590347 FLG2Q5D862 2391 aaPredicted RBP9.26□□□□□ -0.93
CIRBP-228ENST00000590347 LINC01556Q5JQF7 62 aa9.25□□□□□ -0.93
CIRBP-228ENST00000590347 RETNLBQ9BQ08 111 aa9.25□□□□□ -0.93
CIRBP-228ENST00000590347 IGLV8-61A0A075B6I0 122 aa9.25□□□□□ -0.93
CIRBP-228ENST00000590347 PLA2G2DQ9UNK4 145 aa9.23□□□□□ -0.93
CIRBP-228ENST00000590347 TLX1NBP0CAT3 122 aa9.23□□□□□ -0.93
CIRBP-228ENST00000590347 C8orf17Q9NRJ1 99 aa9.2□□□□□ -0.94
CIRBP-228ENST00000590347 SPINK6Q6UWN8 80 aa9.19□□□□□ -0.94
CIRBP-228ENST00000590347 Q6ZR54 194 aa9.18□□□□□ -0.94
CIRBP-228ENST00000590347 PLA2G1BP04054 148 aaKnown RBP9.17□□□□□ -0.94
CIRBP-228ENST00000590347 ANAPC11Q9NYG5 84 aa9.17□□□□□ -0.94
CIRBP-228ENST00000590347 Q5W150 140 aa9.17□□□□□ -0.94
CIRBP-228ENST00000590347 A0A1B0GU69 56 aa9.14□□□□□ -0.95
CIRBP-228ENST00000590347 Q96NJ1 140 aa9.13□□□□□ -0.95
CIRBP-228ENST00000590347 RTL8CO15255 209 aa9.11□□□□□ -0.95
CIRBP-228ENST00000590347 TP53AIP1Q9HCN2 124 aa9.11□□□□□ -0.95
CIRBP-228ENST00000590347 HUWE1Q7Z6Z7 4374 aaKnown RBP9.1□□□□□ -0.95
CIRBP-228ENST00000590347 H3BNG1 76 aa9.1□□□□□ -0.95
CIRBP-228ENST00000590347 CDK2AP2O75956 126 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms