RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 VAMP8Q9BV40 100 aa11.73□□□□□ -0.53
LRP3-202ENST00000590275 PYY3Q5JQD4 70 aa11.69□□□□□ -0.54
LRP3-202ENST00000590275 C1orf195Q5TG92 126 aa11.69□□□□□ -0.54
LRP3-202ENST00000590275 Q5XG85 94 aa11.69□□□□□ -0.54
LRP3-202ENST00000590275 C9orf92A6NGG3 77 aa11.66□□□□□ -0.54
LRP3-202ENST00000590275 FAM218AQ96MZ4 157 aa11.66□□□□□ -0.54
LRP3-202ENST00000590275 IGLV8-61A0A075B6I0 122 aa11.65□□□□□ -0.54
LRP3-202ENST00000590275 A0A0B4J2C4 111 aa11.65□□□□□ -0.54
LRP3-202ENST00000590275 A0A0U1RQV1 116 aa11.65□□□□□ -0.54
LRP3-202ENST00000590275 FXYD2P54710 66 aa11.64□□□□□ -0.55
LRP3-202ENST00000590275 BVES-AS1Q5T3Y7 98 aa11.64□□□□□ -0.55
LRP3-202ENST00000590275 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.64□□□□□ -0.55
LRP3-202ENST00000590275 CEND1Q8N111 149 aa11.64□□□□□ -0.55
LRP3-202ENST00000590275 IGFL1Q6UW32 110 aa11.63□□□□□ -0.55
LRP3-202ENST00000590275 SEC61BP60468 96 aaKnown RBP11.62□□□□□ -0.55
LRP3-202ENST00000590275 RAB37Q96AX2 223 aa11.62□□□□□ -0.55
LRP3-202ENST00000590275 OCIAD2Q56VL3 154 aa11.6□□□□□ -0.55
LRP3-202ENST00000590275 TMA7Q9Y2S6 64 aaKnown RBP11.6□□□□□ -0.55
LRP3-202ENST00000590275 F8WEM9 126 aa11.59□□□□□ -0.55
LRP3-202ENST00000590275 H3BUT2 72 aa11.57□□□□□ -0.56
LRP3-202ENST00000590275 CLEC2BQ92478 149 aa11.56□□□□□ -0.56
LRP3-202ENST00000590275 TRBV7-7A0A0K0K1E9 115 aa11.54□□□□□ -0.56
LRP3-202ENST00000590275 Q6JHZ5 121 aa11.54□□□□□ -0.56
LRP3-202ENST00000590275 PRO1854Q9UHT4 67 aa11.54□□□□□ -0.56
LRP3-202ENST00000590275 PCOTHQ58A44 107 aa11.53□□□□□ -0.56
LRP3-202ENST00000590275 PPDPFLQ8WWR9 84 aa11.53□□□□□ -0.56
LRP3-202ENST00000590275 H0YGX0 51 aa11.52□□□□□ -0.57
LRP3-202ENST00000590275 K7ERJ3 54 aa11.51□□□□□ -0.57
LRP3-202ENST00000590275 TRIAP1O43715 76 aa11.51□□□□□ -0.57
LRP3-202ENST00000590275 SNHG12Q9BXW3 62 aa11.51□□□□□ -0.57
LRP3-202ENST00000590275 TCL1BO95988 128 aa11.5□□□□□ -0.57
LRP3-202ENST00000590275 TMEM238LA0A1B0GVL6 79 aa11.48□□□□□ -0.57
LRP3-202ENST00000590275 A6NJY4 79 aa11.48□□□□□ -0.57
LRP3-202ENST00000590275 HSD52Q0P140 79 aa11.48□□□□□ -0.57
LRP3-202ENST00000590275 KRTAP19-2Q3LHN2 52 aa11.48□□□□□ -0.57
LRP3-202ENST00000590275 LCE2CQ5TA81 110 aa11.47□□□□□ -0.57
LRP3-202ENST00000590275 NDUFV3P56181 108 aaKnown RBP11.45□□□□□ -0.58
LRP3-202ENST00000590275 A0A1B0GX51 115 aa11.41□□□□□ -0.58
LRP3-202ENST00000590275 RPL37P61927 97 aaKnown RBP11.41□□□□□ -0.58
LRP3-202ENST00000590275 UQCR10Q9UDW1 63 aa11.4□□□□□ -0.58
LRP3-202ENST00000590275 Q6Q795 121 aa11.39□□□□□ -0.59
LRP3-202ENST00000590275 H3BMG7 143 aa11.37□□□□□ -0.59
LRP3-202ENST00000590275 FABP2P12104 132 aa11.37□□□□□ -0.59
LRP3-202ENST00000590275 SNCGO76070 127 aa11.36□□□□□ -0.59
LRP3-202ENST00000590275 A0A1W2PNM2 257 aa11.35□□□□□ -0.59
LRP3-202ENST00000590275 TEN1Q86WV5 123 aa11.34□□□□□ -0.59
LRP3-202ENST00000590275 KRTAP9-2Q9BYQ4 174 aa11.34□□□□□ -0.59
LRP3-202ENST00000590275 LST1O00453 97 aa11.33□□□□□ -0.6
LRP3-202ENST00000590275 PSMB2P49721 201 aa11.33□□□□□ -0.6
LRP3-202ENST00000590275 Q96NJ1 140 aa11.33□□□□□ -0.6
LRP3-202ENST00000590275 A0A087WSZ3 146 aa11.32□□□□□ -0.6
LRP3-202ENST00000590275 OBSCN-AS1Q96MR7 158 aa11.31□□□□□ -0.6
LRP3-202ENST00000590275 A0A1B0GV72 72 aa11.3□□□□□ -0.6
LRP3-202ENST00000590275 ORMDL1Q9P0S3 153 aa11.27□□□□□ -0.61
LRP3-202ENST00000590275 MT1HP80294 61 aa11.26□□□□□ -0.61
LRP3-202ENST00000590275 DNAL4O96015 105 aa11.24□□□□□ -0.61
LRP3-202ENST00000590275 SS18L2Q9UHA2 77 aa11.24□□□□□ -0.61
LRP3-202ENST00000590275 GHRHP01286 108 aa11.22□□□□□ -0.61
LRP3-202ENST00000590275 COX6CP09669 75 aa11.22□□□□□ -0.61
LRP3-202ENST00000590275 Q75L30 129 aa11.21□□□□□ -0.61
LRP3-202ENST00000590275 ANKRD29Q8N6D5 301 aa11.2□□□□□ -0.62
LRP3-202ENST00000590275 TMEM256-PLSCR3K7ERE1 68 aa11.19□□□□□ -0.62
LRP3-202ENST00000590275 TRACP01848 142 aa11.19□□□□□ -0.62
LRP3-202ENST00000590275 FLGP20930 4061 aaPredicted RBP11.18□□□□□ -0.62
LRP3-202ENST00000590275 TRBV7-4A0A0J9YYF1 115 aa11.17□□□□□ -0.62
LRP3-202ENST00000590275 SCGB1C2P0DMR2 95 aa11.16□□□□□ -0.62
LRP3-202ENST00000590275 UBE2V1Q13404 147 aa11.16□□□□□ -0.62
LRP3-202ENST00000590275 NAA38Q9BRA0 125 aaKnown RBP11.16□□□□□ -0.62
LRP3-202ENST00000590275 H3BQ85 93 aa11.15□□□□□ -0.62
LRP3-202ENST00000590275 DSCR10P59022 87 aa11.15□□□□□ -0.62
LRP3-202ENST00000590275 C20orf166-AS1Q96NR2 134 aa11.15□□□□□ -0.62
LRP3-202ENST00000590275 A8MUU9 505 aa11.12□□□□□ -0.63
LRP3-202ENST00000590275 CCKP06307 115 aa11.12□□□□□ -0.63
LRP3-202ENST00000590275 DEFB116Q30KQ4 102 aa11.12□□□□□ -0.63
LRP3-202ENST00000590275 SMIM6P0DI80 62 aa11.11□□□□□ -0.63
LRP3-202ENST00000590275 NOTCH2NLQ7Z3S9 236 aa11.11□□□□□ -0.63
LRP3-202ENST00000590275 LINC00472Q9H8W2 130 aa11.11□□□□□ -0.63
LRP3-202ENST00000590275 ATP11AUNQ6ZP68 121 aa11.09□□□□□ -0.63
LRP3-202ENST00000590275 SIGMAR1Q99720 223 aa11.09□□□□□ -0.63
LRP3-202ENST00000590275 KRTAP16-1A8MUX0 517 aa11.08□□□□□ -0.64
LRP3-202ENST00000590275 IGKV4-1P06312 121 aa11.08□□□□□ -0.64
LRP3-202ENST00000590275 BAALC-AS2P0C853 105 aa11.08□□□□□ -0.64
LRP3-202ENST00000590275 M0R143 59 aa11.05□□□□□ -0.64
LRP3-202ENST00000590275 RBM3P98179 157 aaKnown RBP11.04□□□□□ -0.64
LRP3-202ENST00000590275 LOC105371267A0A1B0GV96 52 aa11.03□□□□□ -0.64
LRP3-202ENST00000590275 LORP23490 312 aaPredicted RBP11.02□□□□□ -0.65
LRP3-202ENST00000590275 LCE2DQ5TA82 110 aaPredicted RBP11.02□□□□□ -0.65
LRP3-202ENST00000590275 VPS25Q9BRG1 176 aa11.02□□□□□ -0.65
LRP3-202ENST00000590275 KRTAP10-6P60371 365 aaPredicted RBP11.01□□□□□ -0.65
LRP3-202ENST00000590275 LINC00313P59037 77 aa11□□□□□ -0.65
LRP3-202ENST00000590275 COX6B2Q6YFQ2 88 aa10.99□□□□□ -0.65
LRP3-202ENST00000590275 ATXN8Q156A1 80 aa10.98□□□□□ -0.65
LRP3-202ENST00000590275 DSCR8Q96T75 97 aa10.98□□□□□ -0.65
LRP3-202ENST00000590275 IGHV6-1A0A0B4J1U7 121 aa10.94□□□□□ -0.66
LRP3-202ENST00000590275 C9JAW5 83 aa10.93□□□□□ -0.66
LRP3-202ENST00000590275 BATFQ16520 125 aa10.93□□□□□ -0.66
LRP3-202ENST00000590275 Q6ZQT0 140 aa10.93□□□□□ -0.66
LRP3-202ENST00000590275 KRTAP9-6A0A140TA67 174 aa10.91□□□□□ -0.66
LRP3-202ENST00000590275 TSTD3H0UI37 97 aa10.91□□□□□ -0.66
LRP3-202ENST00000590275 A0A1B0GVX0 72 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms