RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 ZNF73O43830 326 aaPredicted RBP10.01□□□□□ -0.81
H3F3B-209ENST00000589949 H3BUT2 72 aa9.98□□□□□ -0.81
H3F3B-209ENST00000589949 SLC25A20O43772 301 aa9.98□□□□□ -0.81
H3F3B-209ENST00000589949 H7C2G1 150 aa9.97□□□□□ -0.81
H3F3B-209ENST00000589949 Q1RN00 199 aa9.97□□□□□ -0.81
H3F3B-209ENST00000589949 C9orf153Q5TBE3 101 aa9.97□□□□□ -0.81
H3F3B-209ENST00000589949 OR13C6PQ8NH95 151 aa9.97□□□□□ -0.81
H3F3B-209ENST00000589949 NAA38Q9BRA0 125 aaKnown RBP9.95□□□□□ -0.82
H3F3B-209ENST00000589949 A0A1B0GV90 55 aa9.94□□□□□ -0.82
H3F3B-209ENST00000589949 A0A1W2PPM0 123 aa9.94□□□□□ -0.82
H3F3B-209ENST00000589949 SEC61BP60468 96 aaKnown RBP9.94□□□□□ -0.82
H3F3B-209ENST00000589949 XP32Q5T750 250 aa9.94□□□□□ -0.82
H3F3B-209ENST00000589949 FABP2P12104 132 aa9.92□□□□□ -0.82
H3F3B-209ENST00000589949 PSMB2P49721 201 aa9.92□□□□□ -0.82
H3F3B-209ENST00000589949 SPRR1BP22528 89 aa9.91□□□□□ -0.82
H3F3B-209ENST00000589949 LYRM7Q5U5X0 104 aa9.91□□□□□ -0.82
H3F3B-209ENST00000589949 SMIM11BQ8TCY0 68 aa9.91□□□□□ -0.82
H3F3B-209ENST00000589949 KRTAP9-6A0A140TA67 174 aa9.9□□□□□ -0.82
H3F3B-209ENST00000589949 TRIAP1O43715 76 aa9.9□□□□□ -0.82
H3F3B-209ENST00000589949 COX6CP09669 75 aa9.9□□□□□ -0.82
H3F3B-209ENST00000589949 SCGB1C2P0DMR2 95 aa9.9□□□□□ -0.82
H3F3B-209ENST00000589949 VAMP3Q15836 100 aa9.9□□□□□ -0.82
H3F3B-209ENST00000589949 CBY1Q9Y3M2 126 aa9.9□□□□□ -0.82
H3F3B-209ENST00000589949 LCE2CQ5TA81 110 aa9.88□□□□□ -0.83
H3F3B-209ENST00000589949 HRCT1Q6UXD1 115 aa9.88□□□□□ -0.83
H3F3B-209ENST00000589949 LINC01547P58512 204 aaPredicted RBP9.87□□□□□ -0.83
H3F3B-209ENST00000589949 SPCS1Q9Y6A9 102 aa9.86□□□□□ -0.83
H3F3B-209ENST00000589949 ELOF1P60002 83 aaKnown RBP9.85□□□□□ -0.83
H3F3B-209ENST00000589949 C6orf99Q4VX62 202 aa9.85□□□□□ -0.83
H3F3B-209ENST00000589949 DHRS4-AS1Q9P1J3 65 aa9.85□□□□□ -0.83
H3F3B-209ENST00000589949 TRBV20-1A0A075B6N2 111 aa9.84□□□□□ -0.83
H3F3B-209ENST00000589949 H0YGX0 51 aa9.84□□□□□ -0.83
H3F3B-209ENST00000589949 KRTAP19-2Q3LHN2 52 aa9.84□□□□□ -0.83
H3F3B-209ENST00000589949 GTF2H5Q6ZYL4 71 aa9.84□□□□□ -0.83
H3F3B-209ENST00000589949 K7EP34 96 aa9.83□□□□□ -0.84
H3F3B-209ENST00000589949 COX7BP24311 80 aa9.83□□□□□ -0.84
H3F3B-209ENST00000589949 TCL1BO95988 128 aa9.82□□□□□ -0.84
H3F3B-209ENST00000589949 TRBV7-6A0A0J9YX20 115 aa9.8□□□□□ -0.84
H3F3B-209ENST00000589949 C9orf92A6NGG3 77 aa9.8□□□□□ -0.84
H3F3B-209ENST00000589949 UBE2V1Q13404 147 aa9.8□□□□□ -0.84
H3F3B-209ENST00000589949 ATXN8Q156A1 80 aa9.8□□□□□ -0.84
H3F3B-209ENST00000589949 DEFB105AQ8NG35 78 aa9.8□□□□□ -0.84
H3F3B-209ENST00000589949 LAMTOR3Q9UHA4 124 aa9.8□□□□□ -0.84
H3F3B-209ENST00000589949 SMIM29Q86T20 159 aa9.79□□□□□ -0.84
H3F3B-209ENST00000589949 CLEC2BQ92478 149 aa9.79□□□□□ -0.84
H3F3B-209ENST00000589949 LIMD2Q9BT23 127 aa9.79□□□□□ -0.84
H3F3B-209ENST00000589949 A0A0G2JQZ4 141 aa9.78□□□□□ -0.84
H3F3B-209ENST00000589949 PCOTHQ58A44 107 aa9.78□□□□□ -0.84
H3F3B-209ENST00000589949 LST1O00453 97 aa9.77□□□□□ -0.85
H3F3B-209ENST00000589949 H3BMG7 143 aa9.76□□□□□ -0.85
H3F3B-209ENST00000589949 FAM218AQ96MZ4 157 aa9.76□□□□□ -0.85
H3F3B-209ENST00000589949 A0A1B0GX51 115 aa9.75□□□□□ -0.85
H3F3B-209ENST00000589949 TEX49A0A1B0GTD5 131 aa9.74□□□□□ -0.85
H3F3B-209ENST00000589949 TRACP01848 142 aa9.74□□□□□ -0.85
H3F3B-209ENST00000589949 CD164Q04900 197 aa9.74□□□□□ -0.85
H3F3B-209ENST00000589949 LINC00575Q6W349 94 aa9.74□□□□□ -0.85
H3F3B-209ENST00000589949 SNCGO76070 127 aa9.73□□□□□ -0.85
H3F3B-209ENST00000589949 IGLV8-61A0A075B6I0 122 aa9.72□□□□□ -0.85
H3F3B-209ENST00000589949 IGLV5-48A0A075B6I7 105 aa9.72□□□□□ -0.85
H3F3B-209ENST00000589949 MT1HP80294 61 aa9.71□□□□□ -0.86
H3F3B-209ENST00000589949 C1orf195Q5TG92 126 aa9.7□□□□□ -0.86
H3F3B-209ENST00000589949 hADV29S1A0JD25 119 aa9.69□□□□□ -0.86
H3F3B-209ENST00000589949 F8W1H4 67 aa9.69□□□□□ -0.86
H3F3B-209ENST00000589949 Q5XG85 94 aa9.69□□□□□ -0.86
H3F3B-209ENST00000589949 C9JAW5 83 aa9.68□□□□□ -0.86
H3F3B-209ENST00000589949 DNAL4O96015 105 aa9.68□□□□□ -0.86
H3F3B-209ENST00000589949 PRO0461Q9UI25 63 aa9.68□□□□□ -0.86
H3F3B-209ENST00000589949 H3BT86 120 aa9.64□□□□□ -0.87
H3F3B-209ENST00000589949 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.64□□□□□ -0.87
H3F3B-209ENST00000589949 MTURNQ8N3F0 131 aa9.64□□□□□ -0.87
H3F3B-209ENST00000589949 BAALC-AS2P0C853 105 aa9.63□□□□□ -0.87
H3F3B-209ENST00000589949 SMCPP49901 116 aaPredicted RBP9.63□□□□□ -0.87
H3F3B-209ENST00000589949 ORMDL1Q9P0S3 153 aa9.63□□□□□ -0.87
H3F3B-209ENST00000589949 ANKRD29Q8N6D5 301 aa9.62□□□□□ -0.87
H3F3B-209ENST00000589949 H3BQ85 93 aa9.61□□□□□ -0.87
H3F3B-209ENST00000589949 GHRHP01286 108 aa9.61□□□□□ -0.87
H3F3B-209ENST00000589949 OCIAD2Q56VL3 154 aa9.61□□□□□ -0.87
H3F3B-209ENST00000589949 Q6ZQY7 126 aa9.6□□□□□ -0.87
H3F3B-209ENST00000589949 FSIP2Q5CZC0 6907 aa9.59□□□□□ -0.87
H3F3B-209ENST00000589949 RPL37P61927 97 aaKnown RBP9.59□□□□□ -0.87
H3F3B-209ENST00000589949 CRCT1Q9UGL9 99 aa9.59□□□□□ -0.87
H3F3B-209ENST00000589949 TMEM256-PLSCR3K7ERE1 68 aa9.58□□□□□ -0.88
H3F3B-209ENST00000589949 LORP23490 312 aaPredicted RBP9.56□□□□□ -0.88
H3F3B-209ENST00000589949 KRTAP10-6P60371 365 aaPredicted RBP9.54□□□□□ -0.88
H3F3B-209ENST00000589949 PPDPFLQ8WWR9 84 aa9.54□□□□□ -0.88
H3F3B-209ENST00000589949 ETDBQ3ZM63 59 aa9.53□□□□□ -0.88
H3F3B-209ENST00000589949 TEN1Q86WV5 123 aa9.53□□□□□ -0.88
H3F3B-209ENST00000589949 IGFL1Q6UW32 110 aa9.5□□□□□ -0.89
H3F3B-209ENST00000589949 F8WEM9 126 aa9.48□□□□□ -0.89
H3F3B-209ENST00000589949 FLGP20930 4061 aaPredicted RBP9.47□□□□□ -0.89
H3F3B-209ENST00000589949 TRBV7-7A0A0K0K1E9 115 aa9.47□□□□□ -0.89
H3F3B-209ENST00000589949 JMJD7-PLA2G4BH0Y9G9 81 aa9.47□□□□□ -0.89
H3F3B-209ENST00000589949 OBSCN-AS1Q96MR7 158 aa9.47□□□□□ -0.89
H3F3B-209ENST00000589949 NDUFV3P56181 108 aaKnown RBP9.46□□□□□ -0.9
H3F3B-209ENST00000589949 Q6JHZ5 121 aa9.45□□□□□ -0.9
H3F3B-209ENST00000589949 RBM3P98179 157 aaKnown RBP9.42□□□□□ -0.9
H3F3B-209ENST00000589949 COX6B2Q6YFQ2 88 aa9.42□□□□□ -0.9
H3F3B-209ENST00000589949 M0R2T5 61 aa9.41□□□□□ -0.9
H3F3B-209ENST00000589949 A0A1B0GV72 72 aa9.38□□□□□ -0.91
H3F3B-209ENST00000589949 J3QR89 54 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms