RNA–Protein interactions for RNA: ENST00000589054.5

NEDD4L-225, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3 BASIC

Gene NEDD4L, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-225ENST00000589054 SCGB1D1O95968 90 aa11.26□□□□□ -0.61
NEDD4L-225ENST00000589054 COPS9Q8WXC6 57 aa11.25□□□□□ -0.61
NEDD4L-225ENST00000589054 TRAV13-2A0A0B4J235 113 aa11.24□□□□□ -0.61
NEDD4L-225ENST00000589054 LINC00575Q6W349 94 aa11.22□□□□□ -0.61
NEDD4L-225ENST00000589054 NHP2Q9NX24 153 aaKnown RBP11.2□□□□□ -0.62
NEDD4L-225ENST00000589054 TCL1BO95988 128 aa11.19□□□□□ -0.62
NEDD4L-225ENST00000589054 M0R2T5 61 aa11.18□□□□□ -0.62
NEDD4L-225ENST00000589054 Q6ZQY7 126 aa11.18□□□□□ -0.62
NEDD4L-225ENST00000589054 IGFL1Q6UW32 110 aa11.17□□□□□ -0.62
NEDD4L-225ENST00000589054 COX6B2Q6YFQ2 88 aa11.16□□□□□ -0.62
NEDD4L-225ENST00000589054 TRBV7-7A0A0K0K1E9 115 aa11.14□□□□□ -0.63
NEDD4L-225ENST00000589054 hADV29S1A0JD25 119 aa11.13□□□□□ -0.63
NEDD4L-225ENST00000589054 F8WEM9 126 aa11.13□□□□□ -0.63
NEDD4L-225ENST00000589054 VAMP3Q15836 100 aa11.11□□□□□ -0.63
NEDD4L-225ENST00000589054 OCIAD2Q56VL3 154 aa11.11□□□□□ -0.63
NEDD4L-225ENST00000589054 CLEC2BQ92478 149 aa11.11□□□□□ -0.63
NEDD4L-225ENST00000589054 OBSCN-AS1Q96MR7 158 aa11.1□□□□□ -0.63
NEDD4L-225ENST00000589054 TMA7Q9Y2S6 64 aaKnown RBP11.1□□□□□ -0.63
NEDD4L-225ENST00000589054 Q6JHZ5 121 aa11.09□□□□□ -0.63
NEDD4L-225ENST00000589054 C12orf57Q99622 126 aa11.07□□□□□ -0.64
NEDD4L-225ENST00000589054 COX8AP10176 69 aa11.06□□□□□ -0.64
NEDD4L-225ENST00000589054 VAMP8Q9BV40 100 aa11.06□□□□□ -0.64
NEDD4L-225ENST00000589054 H3BUT2 72 aa11.05□□□□□ -0.64
NEDD4L-225ENST00000589054 Q75L30 129 aa11.05□□□□□ -0.64
NEDD4L-225ENST00000589054 PAM16Q9Y3D7 125 aa11.05□□□□□ -0.64
NEDD4L-225ENST00000589054 SPATA45Q537H7 98 aa11.04□□□□□ -0.64
NEDD4L-225ENST00000589054 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.03□□□□□ -0.64
NEDD4L-225ENST00000589054 DLEU1O43261 78 aa11.02□□□□□ -0.65
NEDD4L-225ENST00000589054 C14orf144Q96I85 54 aa11.02□□□□□ -0.65
NEDD4L-225ENST00000589054 Q6Q795 121 aa11.01□□□□□ -0.65
NEDD4L-225ENST00000589054 HIST1H4GQ99525 98 aa11.01□□□□□ -0.65
NEDD4L-225ENST00000589054 ATP11AUNQ6ZP68 121 aa11□□□□□ -0.65
NEDD4L-225ENST00000589054 SNHG12Q9BXW3 62 aa10.97□□□□□ -0.65
NEDD4L-225ENST00000589054 LST1O00453 97 aa10.96□□□□□ -0.65
NEDD4L-225ENST00000589054 Q96NJ1 140 aa10.96□□□□□ -0.65
NEDD4L-225ENST00000589054 PYY3Q5JQD4 70 aa10.95□□□□□ -0.66
NEDD4L-225ENST00000589054 PPDPFLQ8WWR9 84 aa10.95□□□□□ -0.66
NEDD4L-225ENST00000589054 BVES-AS1Q5T3Y7 98 aa10.94□□□□□ -0.66
NEDD4L-225ENST00000589054 USH2AO75445 5202 aa10.94□□□□□ -0.66
NEDD4L-225ENST00000589054 FAM218AQ96MZ4 157 aa10.93□□□□□ -0.66
NEDD4L-225ENST00000589054 KRTAP9-8Q9BYQ0 159 aa10.93□□□□□ -0.66
NEDD4L-225ENST00000589054 HIGD1BQ9P298 99 aa10.93□□□□□ -0.66
NEDD4L-225ENST00000589054 SSPOA2VEC9 5147 aa10.92□□□□□ -0.66
NEDD4L-225ENST00000589054 C20orf166-AS1Q96NR2 134 aa10.92□□□□□ -0.66
NEDD4L-225ENST00000589054 CFC1P0CG37 223 aa10.91□□□□□ -0.66
NEDD4L-225ENST00000589054 A8MUU9 505 aa10.9□□□□□ -0.66
NEDD4L-225ENST00000589054 C2orf91Q6ZV80 131 aa10.87□□□□□ -0.67
NEDD4L-225ENST00000589054 KRTAP16-1A8MUX0 517 aa10.85□□□□□ -0.67
NEDD4L-225ENST00000589054 NDUFV3P56181 108 aaKnown RBP10.85□□□□□ -0.67
NEDD4L-225ENST00000589054 RAB37Q96AX2 223 aa10.85□□□□□ -0.67
NEDD4L-225ENST00000589054 A0A087WSZ3 146 aa10.84□□□□□ -0.67
NEDD4L-225ENST00000589054 TEN1Q86WV5 123 aa10.84□□□□□ -0.67
NEDD4L-225ENST00000589054 CEND1Q8N111 149 aa10.83□□□□□ -0.68
NEDD4L-225ENST00000589054 DSCR10P59022 87 aa10.82□□□□□ -0.68
NEDD4L-225ENST00000589054 TMEM238LA0A1B0GVL6 79 aa10.81□□□□□ -0.68
NEDD4L-225ENST00000589054 A6NJY4 79 aa10.81□□□□□ -0.68
NEDD4L-225ENST00000589054 SS18L2Q9UHA2 77 aa10.81□□□□□ -0.68
NEDD4L-225ENST00000589054 A0A1W2PNM2 257 aa10.79□□□□□ -0.68
NEDD4L-225ENST00000589054 A0A0B4J2C4 111 aa10.78□□□□□ -0.68
NEDD4L-225ENST00000589054 H0YGX0 51 aa10.78□□□□□ -0.68
NEDD4L-225ENST00000589054 UQCR10Q9UDW1 63 aa10.78□□□□□ -0.68
NEDD4L-225ENST00000589054 H3BMG7 143 aa10.77□□□□□ -0.69
NEDD4L-225ENST00000589054 HSD52Q0P140 79 aa10.75□□□□□ -0.69
NEDD4L-225ENST00000589054 NOTCH2NLQ7Z3S9 236 aa10.74□□□□□ -0.69
NEDD4L-225ENST00000589054 PRO1854Q9UHT4 67 aa10.74□□□□□ -0.69
NEDD4L-225ENST00000589054 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.73□□□□□ -0.69
NEDD4L-225ENST00000589054 FXYD2P54710 66 aa10.73□□□□□ -0.69
NEDD4L-225ENST00000589054 MT2AP02795 61 aa10.72□□□□□ -0.69
NEDD4L-225ENST00000589054 FABP2P12104 132 aa10.72□□□□□ -0.69
NEDD4L-225ENST00000589054 SNCGO76070 127 aa10.71□□□□□ -0.69
NEDD4L-225ENST00000589054 TRBV20-1A0A075B6N2 111 aa10.7□□□□□ -0.7
NEDD4L-225ENST00000589054 SIGMAR1Q99720 223 aa10.69□□□□□ -0.7
NEDD4L-225ENST00000589054 A0A1B0GX51 115 aa10.67□□□□□ -0.7
NEDD4L-225ENST00000589054 KRTAP9-7A8MTY7 169 aa10.67□□□□□ -0.7
NEDD4L-225ENST00000589054 TRIAP1O43715 76 aa10.67□□□□□ -0.7
NEDD4L-225ENST00000589054 MPLKIPQ8TAP9 179 aa10.67□□□□□ -0.7
NEDD4L-225ENST00000589054 SMIM6P0DI80 62 aa10.66□□□□□ -0.7
NEDD4L-225ENST00000589054 HRES1P13985 223 aa10.66□□□□□ -0.7
NEDD4L-225ENST00000589054 LINC00313P59037 77 aa10.66□□□□□ -0.7
NEDD4L-225ENST00000589054 A0A1B0GV72 72 aa10.65□□□□□ -0.7
NEDD4L-225ENST00000589054 MT1FP04733 61 aa10.65□□□□□ -0.7
NEDD4L-225ENST00000589054 DEFB116Q30KQ4 102 aa10.65□□□□□ -0.7
NEDD4L-225ENST00000589054 FCGBPQ9Y6R7 5405 aaPredicted RBP10.65□□□□□ -0.71
NEDD4L-225ENST00000589054 LCE2BO14633 110 aa10.64□□□□□ -0.71
NEDD4L-225ENST00000589054 IGKV4-1P06312 121 aa10.64□□□□□ -0.71
NEDD4L-225ENST00000589054 K7ERJ3 54 aa10.61□□□□□ -0.71
NEDD4L-225ENST00000589054 PSMB2P49721 201 aa10.61□□□□□ -0.71
NEDD4L-225ENST00000589054 LINC00472Q9H8W2 130 aa10.61□□□□□ -0.71
NEDD4L-225ENST00000589054 TRBV7-4A0A0J9YYF1 115 aa10.6□□□□□ -0.71
NEDD4L-225ENST00000589054 ANKRD29Q8N6D5 301 aa10.6□□□□□ -0.71
NEDD4L-225ENST00000589054 KRTAP9-3Q9BYQ3 159 aa10.59□□□□□ -0.71
NEDD4L-225ENST00000589054 COX6CP09669 75 aa10.58□□□□□ -0.72
NEDD4L-225ENST00000589054 FAM236DA0A1B0GTK5 79 aa10.57□□□□□ -0.72
NEDD4L-225ENST00000589054 FAM236CP0DP71 79 aa10.57□□□□□ -0.72
NEDD4L-225ENST00000589054 KRTAP3-3Q9BYR6 98 aa10.57□□□□□ -0.72
NEDD4L-225ENST00000589054 KRTAP3-2Q9BYR7 98 aa10.57□□□□□ -0.72
NEDD4L-225ENST00000589054 GHRHP01286 108 aa10.56□□□□□ -0.72
NEDD4L-225ENST00000589054 LOC105371267A0A1B0GV96 52 aa10.55□□□□□ -0.72
NEDD4L-225ENST00000589054 ORMDL1Q9P0S3 153 aa10.54□□□□□ -0.72
NEDD4L-225ENST00000589054 IGHV6-1A0A0B4J1U7 121 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms