RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 KIAA1109Q2LD37 5005 aa8.74□□□□□ -1.01
NPC1-207ENST00000588867 RYR1P21817 5038 aa8.73□□□□□ -1.01
NPC1-207ENST00000588867 H3BT86 120 aa8.73□□□□□ -1.01
NPC1-207ENST00000588867 SMCPP49901 116 aaPredicted RBP8.73□□□□□ -1.01
NPC1-207ENST00000588867 Q8N1X5 172 aa8.73□□□□□ -1.01
NPC1-207ENST00000588867 H3BQ85 93 aa8.73□□□□□ -1.01
NPC1-207ENST00000588867 C3orf22Q8N5N4 141 aa8.73□□□□□ -1.01
NPC1-207ENST00000588867 ANAPC11Q9NYG5 84 aa8.73□□□□□ -1.01
NPC1-207ENST00000588867 HSPG2P98160 4391 aa8.72□□□□□ -1.01
NPC1-207ENST00000588867 FAT1Q14517 4588 aa8.72□□□□□ -1.01
NPC1-207ENST00000588867 LAMTOR3Q9UHA4 124 aa8.71□□□□□ -1.01
NPC1-207ENST00000588867 PPDPFLQ8WWR9 84 aa8.71□□□□□ -1.02
NPC1-207ENST00000588867 SPRR1BP22528 89 aa8.7□□□□□ -1.02
NPC1-207ENST00000588867 NDUFV3P56181 108 aaKnown RBP8.7□□□□□ -1.02
NPC1-207ENST00000588867 LINC00483Q53H64 154 aa8.68□□□□□ -1.02
NPC1-207ENST00000588867 SMIM29Q86T20 159 aa8.68□□□□□ -1.02
NPC1-207ENST00000588867 IGLV9-49A0A0B4J1Y8 123 aa8.66□□□□□ -1.02
NPC1-207ENST00000588867 F8WEM9 126 aa8.66□□□□□ -1.02
NPC1-207ENST00000588867 ETDBQ3ZM63 59 aa8.66□□□□□ -1.02
NPC1-207ENST00000588867 LINC01600Q96MT4 127 aa8.66□□□□□ -1.02
NPC1-207ENST00000588867 KRTAP1-4P0C5Y4 121 aa8.64□□□□□ -1.03
NPC1-207ENST00000588867 BIRC6Q9NR09 4857 aa8.63□□□□□ -1.03
NPC1-207ENST00000588867 JMJD7-PLA2G4BH0Y9G9 81 aa8.63□□□□□ -1.03
NPC1-207ENST00000588867 RBM3P98179 157 aaKnown RBP8.63□□□□□ -1.03
NPC1-207ENST00000588867 C9orf153Q5TBE3 101 aa8.63□□□□□ -1.03
NPC1-207ENST00000588867 TEN1Q86WV5 123 aa8.63□□□□□ -1.03
NPC1-207ENST00000588867 A0A087X002 238 aa8.61□□□□□ -1.03
NPC1-207ENST00000588867 FAM229BQ4G0N7 80 aa8.61□□□□□ -1.03
NPC1-207ENST00000588867 CRYGAP11844 174 aa8.61□□□□□ -1.03
NPC1-207ENST00000588867 MOBPQ13875 183 aa8.6□□□□□ -1.03
NPC1-207ENST00000588867 C14orf132Q9NPU4 83 aa8.6□□□□□ -1.03
NPC1-207ENST00000588867 OBSCN-AS1Q96MR7 158 aa8.59□□□□□ -1.03
NPC1-207ENST00000588867 DSCR8Q96T75 97 aa8.59□□□□□ -1.03
NPC1-207ENST00000588867 KRTAP4-5Q9BYR2 181 aa8.59□□□□□ -1.03
NPC1-207ENST00000588867 A0A0G2JQZ4 141 aa8.58□□□□□ -1.04
NPC1-207ENST00000588867 PRR26Q8N8Z3 221 aa8.58□□□□□ -1.04
NPC1-207ENST00000588867 KRTAP13-2Q52LG2 175 aa8.57□□□□□ -1.04
NPC1-207ENST00000588867 IGLV8-61A0A075B6I0 122 aa8.56□□□□□ -1.04
NPC1-207ENST00000588867 Q8NBF4 154 aa8.56□□□□□ -1.04
NPC1-207ENST00000588867 IGFL1Q6UW32 110 aa8.55□□□□□ -1.04
NPC1-207ENST00000588867 Q6JHZ5 121 aa8.54□□□□□ -1.04
NPC1-207ENST00000588867 TRBV7-4A0A0J9YYF1 115 aa8.54□□□□□ -1.04
NPC1-207ENST00000588867 TYMSOSQ8TAI1 123 aa8.54□□□□□ -1.04
NPC1-207ENST00000588867 SSBP3-AS1Q7Z2R9 100 aa8.53□□□□□ -1.04
NPC1-207ENST00000588867 LOC110117498A0A087WWA1 95 aa8.52□□□□□ -1.05
NPC1-207ENST00000588867 CCKP06307 115 aa8.52□□□□□ -1.05
NPC1-207ENST00000588867 Q6ZQT0 140 aa8.52□□□□□ -1.05
NPC1-207ENST00000588867 CDIP1Q9H305 208 aa8.51□□□□□ -1.05
NPC1-207ENST00000588867 FLG2Q5D862 2391 aaPredicted RBP8.51□□□□□ -1.05
NPC1-207ENST00000588867 PDE6GP18545 87 aa8.51□□□□□ -1.05
NPC1-207ENST00000588867 HRCT1Q6UXD1 115 aa8.51□□□□□ -1.05
NPC1-207ENST00000588867 PKHD1L1Q86WI1 4243 aa8.5□□□□□ -1.05
NPC1-207ENST00000588867 A0A1W2PNM2 257 aa8.49□□□□□ -1.05
NPC1-207ENST00000588867 MT-ATP8P03928 68 aa8.46□□□□□ -1.05
NPC1-207ENST00000588867 HERC2O95714 4834 aa8.46□□□□□ -1.06
NPC1-207ENST00000588867 C4orf48Q5BLP8 95 aa8.45□□□□□ -1.06
NPC1-207ENST00000588867 KRTAP10-8P60410 259 aa8.43□□□□□ -1.06
NPC1-207ENST00000588867 LINC00304Q8N9R0 145 aa8.43□□□□□ -1.06
NPC1-207ENST00000588867 ANAPC13Q9BS18 74 aa8.43□□□□□ -1.06
NPC1-207ENST00000588867 Q6Q795 121 aa8.42□□□□□ -1.06
NPC1-207ENST00000588867 A0A087WSZ3 146 aa8.41□□□□□ -1.06
NPC1-207ENST00000588867 TRBV7-7A0A0K0K1E9 115 aa8.41□□□□□ -1.06
NPC1-207ENST00000588867 OXTP01178 125 aa8.41□□□□□ -1.06
NPC1-207ENST00000588867 CD164Q04900 197 aa8.41□□□□□ -1.06
NPC1-207ENST00000588867 LRP1Q07954 4544 aaKnown RBP8.41□□□□□ -1.06
NPC1-207ENST00000588867 SPAG11AQ6PDA7 123 aa8.38□□□□□ -1.07
NPC1-207ENST00000588867 SPINK1P00995 79 aa8.37□□□□□ -1.07
NPC1-207ENST00000588867 MT1HL1P0DM35 61 aa8.37□□□□□ -1.07
NPC1-207ENST00000588867 SS18L2Q9UHA2 77 aa8.37□□□□□ -1.07
NPC1-207ENST00000588867 A0A1B0GW54 56 aa8.37□□□□□ -1.07
NPC1-207ENST00000588867 LINC00846Q9NV44 126 aa8.37□□□□□ -1.07
NPC1-207ENST00000588867 KRTAP29-1A8MX34 341 aaPredicted RBP8.36□□□□□ -1.07
NPC1-207ENST00000588867 ACYP1P07311 99 aa8.36□□□□□ -1.07
NPC1-207ENST00000588867 ABCA13Q86UQ4 5058 aa8.36□□□□□ -1.07
NPC1-207ENST00000588867 MYCBP2O75592 4640 aa8.35□□□□□ -1.07
NPC1-207ENST00000588867 FAM240AA0A1B0GVK7 77 aa8.35□□□□□ -1.07
NPC1-207ENST00000588867 FAT3Q8TDW7 4589 aa8.34□□□□□ -1.07
NPC1-207ENST00000588867 NREPQ16612 68 aa8.33□□□□□ -1.08
NPC1-207ENST00000588867 LIMD2Q9BT23 127 aa8.32□□□□□ -1.08
NPC1-207ENST00000588867 UBL5Q9BZL1 73 aa8.32□□□□□ -1.08
NPC1-207ENST00000588867 J3QL48 77 aa8.31□□□□□ -1.08
NPC1-207ENST00000588867 Q6ZVQ6 151 aa8.3□□□□□ -1.08
NPC1-207ENST00000588867 RPS29P62273 56 aaKnown RBP8.29□□□□□ -1.08
NPC1-207ENST00000588867 DEFB116Q30KQ4 102 aa8.29□□□□□ -1.08
NPC1-207ENST00000588867 DMBT1Q9UGM3 2413 aaPredicted RBP8.29□□□□□ -1.08
NPC1-207ENST00000588867 TNXBP22105 4242 aa8.28□□□□□ -1.08
NPC1-207ENST00000588867 Q5XG85 94 aa8.28□□□□□ -1.08
NPC1-207ENST00000588867 CCDC179H3BU77 68 aa8.25□□□□□ -1.09
NPC1-207ENST00000588867 LINC00472Q9H8W2 130 aa8.25□□□□□ -1.09
NPC1-207ENST00000588867 ASB16-AS1Q495Z4 193 aa8.25□□□□□ -1.09
NPC1-207ENST00000588867 C1orf195Q5TG92 126 aa8.24□□□□□ -1.09
NPC1-207ENST00000588867 Q96NJ1 140 aa8.24□□□□□ -1.09
NPC1-207ENST00000588867 RETNLBQ9BQ08 111 aa8.24□□□□□ -1.09
NPC1-207ENST00000588867 BPY2O14599 106 aa8.23□□□□□ -1.09
NPC1-207ENST00000588867 IGKV4-1P06312 121 aa8.23□□□□□ -1.09
NPC1-207ENST00000588867 SMIM20Q8N5G0 67 aa8.22□□□□□ -1.09
NPC1-207ENST00000588867 LINC00643Q86TS7 51 aa8.21□□□□□ -1.1
NPC1-207ENST00000588867 IGKV3D-7A0A0C4DH55 119 aa8.2□□□□□ -1.1
NPC1-207ENST00000588867 J3KT08 172 aa8.19□□□□□ -1.1
NPC1-207ENST00000588867 PCLOQ9Y6V0 5065 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms