RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 C9orf92A6NGG3 77 aa10.75□□□□□ -0.69
TPM4-208ENST00000588410 RAB37Q96AX2 223 aa10.75□□□□□ -0.69
TPM4-208ENST00000588410 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.74□□□□□ -0.69
TPM4-208ENST00000588410 TCL1BO95988 128 aa10.73□□□□□ -0.69
TPM4-208ENST00000588410 HIGD1BQ9P298 99 aa10.73□□□□□ -0.69
TPM4-208ENST00000588410 C1orf195Q5TG92 126 aa10.72□□□□□ -0.69
TPM4-208ENST00000588410 Q6JHZ5 121 aa10.72□□□□□ -0.69
TPM4-208ENST00000588410 KRTAP9-2Q9BYQ4 174 aa10.72□□□□□ -0.69
TPM4-208ENST00000588410 CFC1BP0CG36 223 aa10.71□□□□□ -0.69
TPM4-208ENST00000588410 CFC1P0CG37 223 aa10.71□□□□□ -0.69
TPM4-208ENST00000588410 LCE2AQ5TA79 106 aaPredicted RBP10.71□□□□□ -0.69
TPM4-208ENST00000588410 SNCGO76070 127 aa10.7□□□□□ -0.7
TPM4-208ENST00000588410 SNHG12Q9BXW3 62 aa10.7□□□□□ -0.7
TPM4-208ENST00000588410 OCIAD2Q56VL3 154 aa10.69□□□□□ -0.7
TPM4-208ENST00000588410 PPDPFLQ8WWR9 84 aa10.69□□□□□ -0.7
TPM4-208ENST00000588410 KRTAP4-1Q9BYQ7 146 aa10.69□□□□□ -0.7
TPM4-208ENST00000588410 A0A0B4J2C4 111 aa10.68□□□□□ -0.7
TPM4-208ENST00000588410 IGLV8-61A0A075B6I0 122 aa10.67□□□□□ -0.7
TPM4-208ENST00000588410 CLEC2BQ92478 149 aa10.67□□□□□ -0.7
TPM4-208ENST00000588410 C2orf91Q6ZV80 131 aa10.66□□□□□ -0.7
TPM4-208ENST00000588410 H0YGX0 51 aa10.65□□□□□ -0.7
TPM4-208ENST00000588410 IGFL1Q6UW32 110 aa10.65□□□□□ -0.7
TPM4-208ENST00000588410 TMEM238LA0A1B0GVL6 79 aa10.64□□□□□ -0.71
TPM4-208ENST00000588410 A6NJY4 79 aa10.64□□□□□ -0.71
TPM4-208ENST00000588410 CEND1Q8N111 149 aa10.64□□□□□ -0.71
TPM4-208ENST00000588410 PCOTHQ58A44 107 aa10.63□□□□□ -0.71
TPM4-208ENST00000588410 TRBV7-7A0A0K0K1E9 115 aa10.62□□□□□ -0.71
TPM4-208ENST00000588410 PRO1854Q9UHT4 67 aa10.6□□□□□ -0.71
TPM4-208ENST00000588410 H3BUT2 72 aa10.59□□□□□ -0.71
TPM4-208ENST00000588410 FAM218AQ96MZ4 157 aa10.57□□□□□ -0.72
TPM4-208ENST00000588410 GHRHP01286 108 aa10.56□□□□□ -0.72
TPM4-208ENST00000588410 FXYD2P54710 66 aa10.55□□□□□ -0.72
TPM4-208ENST00000588410 KRTAP9-6A0A140TA67 174 aa10.54□□□□□ -0.72
TPM4-208ENST00000588410 A0A1B0GX51 115 aa10.54□□□□□ -0.72
TPM4-208ENST00000588410 PYY3Q5JQD4 70 aa10.54□□□□□ -0.72
TPM4-208ENST00000588410 NDUFV3P56181 108 aaKnown RBP10.53□□□□□ -0.72
TPM4-208ENST00000588410 RPL37P61927 97 aaKnown RBP10.52□□□□□ -0.73
TPM4-208ENST00000588410 LST1O00453 97 aa10.51□□□□□ -0.73
TPM4-208ENST00000588410 FABP2P12104 132 aa10.51□□□□□ -0.73
TPM4-208ENST00000588410 HSD52Q0P140 79 aa10.51□□□□□ -0.73
TPM4-208ENST00000588410 TMA7Q9Y2S6 64 aaKnown RBP10.5□□□□□ -0.73
TPM4-208ENST00000588410 TRIAP1O43715 76 aa10.49□□□□□ -0.73
TPM4-208ENST00000588410 SS18L2Q9UHA2 77 aa10.49□□□□□ -0.73
TPM4-208ENST00000588410 PSMB2P49721 201 aa10.48□□□□□ -0.73
TPM4-208ENST00000588410 H3BMG7 143 aa10.47□□□□□ -0.73
TPM4-208ENST00000588410 Q6Q795 121 aa10.47□□□□□ -0.73
TPM4-208ENST00000588410 TEN1Q86WV5 123 aa10.47□□□□□ -0.73
TPM4-208ENST00000588410 DNAL4O96015 105 aa10.45□□□□□ -0.74
TPM4-208ENST00000588410 K7ERJ3 54 aa10.44□□□□□ -0.74
TPM4-208ENST00000588410 COX6CP09669 75 aa10.44□□□□□ -0.74
TPM4-208ENST00000588410 UQCR10Q9UDW1 63 aa10.44□□□□□ -0.74
TPM4-208ENST00000588410 OBSCN-AS1Q96MR7 158 aa10.43□□□□□ -0.74
TPM4-208ENST00000588410 A0A087WSZ3 146 aa10.41□□□□□ -0.74
TPM4-208ENST00000588410 H3BQ85 93 aa10.41□□□□□ -0.74
TPM4-208ENST00000588410 ORMDL1Q9P0S3 153 aa10.41□□□□□ -0.74
TPM4-208ENST00000588410 LCE2CQ5TA81 110 aa10.4□□□□□ -0.74
TPM4-208ENST00000588410 KRTAP19-2Q3LHN2 52 aa10.37□□□□□ -0.75
TPM4-208ENST00000588410 ATP11AUNQ6ZP68 121 aa10.37□□□□□ -0.75
TPM4-208ENST00000588410 ANKRD29Q8N6D5 301 aa10.36□□□□□ -0.75
TPM4-208ENST00000588410 Q96NJ1 140 aa10.36□□□□□ -0.75
TPM4-208ENST00000588410 A0A1B0GV72 72 aa10.35□□□□□ -0.75
TPM4-208ENST00000588410 TMEM256-PLSCR3K7ERE1 68 aa10.35□□□□□ -0.75
TPM4-208ENST00000588410 Q75L30 129 aa10.35□□□□□ -0.75
TPM4-208ENST00000588410 A0A1W2PNM2 257 aa10.34□□□□□ -0.75
TPM4-208ENST00000588410 SCGB1C2P0DMR2 95 aa10.32□□□□□ -0.76
TPM4-208ENST00000588410 MT1HP80294 61 aa10.31□□□□□ -0.76
TPM4-208ENST00000588410 COX6B2Q6YFQ2 88 aa10.31□□□□□ -0.76
TPM4-208ENST00000588410 TRBV7-4A0A0J9YYF1 115 aa10.29□□□□□ -0.76
TPM4-208ENST00000588410 SIGMAR1Q99720 223 aa10.29□□□□□ -0.76
TPM4-208ENST00000588410 TRACP01848 142 aa10.28□□□□□ -0.76
TPM4-208ENST00000588410 UBE2V1Q13404 147 aa10.27□□□□□ -0.77
TPM4-208ENST00000588410 CCKP06307 115 aa10.25□□□□□ -0.77
TPM4-208ENST00000588410 C20orf166-AS1Q96NR2 134 aa10.24□□□□□ -0.77
TPM4-208ENST00000588410 IGKV4-1P06312 121 aa10.23□□□□□ -0.77
TPM4-208ENST00000588410 DSCR10P59022 87 aa10.23□□□□□ -0.77
TPM4-208ENST00000588410 A8MUU9 505 aa10.21□□□□□ -0.77
TPM4-208ENST00000588410 M0R2T5 61 aa10.21□□□□□ -0.77
TPM4-208ENST00000588410 VPS25Q9BRG1 176 aa10.2□□□□□ -0.78
TPM4-208ENST00000588410 M0R143 59 aa10.19□□□□□ -0.78
TPM4-208ENST00000588410 LINC00313P59037 77 aa10.19□□□□□ -0.78
TPM4-208ENST00000588410 RBM3P98179 157 aaKnown RBP10.19□□□□□ -0.78
TPM4-208ENST00000588410 DSCR8Q96T75 97 aa10.19□□□□□ -0.78
TPM4-208ENST00000588410 BAALC-AS2P0C853 105 aa10.17□□□□□ -0.78
TPM4-208ENST00000588410 DEFB116Q30KQ4 102 aa10.17□□□□□ -0.78
TPM4-208ENST00000588410 LCE2DQ5TA82 110 aaPredicted RBP10.17□□□□□ -0.78
TPM4-208ENST00000588410 LINC00472Q9H8W2 130 aa10.15□□□□□ -0.78
TPM4-208ENST00000588410 ATXN8Q156A1 80 aa10.12□□□□□ -0.79
TPM4-208ENST00000588410 IGHV6-1A0A0B4J1U7 121 aa10.11□□□□□ -0.79
TPM4-208ENST00000588410 C9JAW5 83 aa10.11□□□□□ -0.79
TPM4-208ENST00000588410 SMIM6P0DI80 62 aa10.11□□□□□ -0.79
TPM4-208ENST00000588410 KRTAP10-6P60371 365 aaPredicted RBP10.11□□□□□ -0.79
TPM4-208ENST00000588410 TRBV20-1A0A075B6N2 111 aa10.1□□□□□ -0.79
TPM4-208ENST00000588410 C21orf62-AS1Q17RA5 79 aa10.1□□□□□ -0.79
TPM4-208ENST00000588410 NAA38Q9BRA0 125 aaKnown RBP10.1□□□□□ -0.79
TPM4-208ENST00000588410 LORP23490 312 aaPredicted RBP10.08□□□□□ -0.8
TPM4-208ENST00000588410 KRTAP16-1A8MUX0 517 aa10.07□□□□□ -0.8
TPM4-208ENST00000588410 NOTCH2NLQ7Z3S9 236 aa10.07□□□□□ -0.8
TPM4-208ENST00000588410 JMJD7-PLA2G4BH0Y9G9 81 aa10.04□□□□□ -0.8
TPM4-208ENST00000588410 CRCT1Q9UGL9 99 aa10.04□□□□□ -0.8
TPM4-208ENST00000588410 A0A1B0GVX0 72 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms