RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 A0A1B0GWB2 263 aa7.09□□□□□ -1.27
CLPTM1-208ENST00000588274 CFC1P0CG37 223 aa7.08□□□□□ -1.28
CLPTM1-208ENST00000588274 COA6Q5JTJ3 125 aaKnown RBP7.08□□□□□ -1.28
CLPTM1-208ENST00000588274 Q75L30 129 aa7.08□□□□□ -1.28
CLPTM1-208ENST00000588274 ZNF815PA8K554 130 aa7.07□□□□□ -1.28
CLPTM1-208ENST00000588274 SYS1-DBNDD2H3BUS1 97 aa7.07□□□□□ -1.28
CLPTM1-208ENST00000588274 HIST3H2BBQ8N257 126 aa7.07□□□□□ -1.28
CLPTM1-208ENST00000588274 A0A1B0GV90 55 aa7.06□□□□□ -1.28
CLPTM1-208ENST00000588274 TSTD3H0UI37 97 aa7.06□□□□□ -1.28
CLPTM1-208ENST00000588274 LINC01545Q5VT33 79 aa7.06□□□□□ -1.28
CLPTM1-208ENST00000588274 Q6Q795 121 aa7.06□□□□□ -1.28
CLPTM1-208ENST00000588274 TCL1BO95988 128 aa7.05□□□□□ -1.28
CLPTM1-208ENST00000588274 S100A2P29034 98 aa7.05□□□□□ -1.28
CLPTM1-208ENST00000588274 LCE2BO14633 110 aa7.04□□□□□ -1.28
CLPTM1-208ENST00000588274 MT2AP02795 61 aa7.04□□□□□ -1.28
CLPTM1-208ENST00000588274 OBSCN-AS1Q96MR7 158 aa7.04□□□□□ -1.28
CLPTM1-208ENST00000588274 KRTAP19-1Q8IUB9 90 aa7.02□□□□□ -1.29
CLPTM1-208ENST00000588274 HIST1H2BLQ99880 126 aa7.02□□□□□ -1.29
CLPTM1-208ENST00000588274 TRBV7-7A0A0K0K1E9 115 aa7.01□□□□□ -1.29
CLPTM1-208ENST00000588274 ATP11AUNQ6ZP68 121 aa7.01□□□□□ -1.29
CLPTM1-208ENST00000588274 C14orf144Q96I85 54 aa7.01□□□□□ -1.29
CLPTM1-208ENST00000588274 A4D1N5 150 aa7□□□□□ -1.29
CLPTM1-208ENST00000588274 MT1FP04733 61 aa7□□□□□ -1.29
CLPTM1-208ENST00000588274 IGFL1Q6UW32 110 aa7□□□□□ -1.29
CLPTM1-208ENST00000588274 PCP2Q8IVA1 136 aa6.99□□□□□ -1.29
CLPTM1-208ENST00000588274 SMIM11BQ8TCY0 68 aa6.99□□□□□ -1.29
CLPTM1-208ENST00000588274 CLEC2BQ92478 149 aa6.99□□□□□ -1.29
CLPTM1-208ENST00000588274 A6NDN8 102 aa6.98□□□□□ -1.29
CLPTM1-208ENST00000588274 PET117Q6UWS5 81 aa6.98□□□□□ -1.29
CLPTM1-208ENST00000588274 IFITM1P13164 125 aa6.97□□□□□ -1.29
CLPTM1-208ENST00000588274 C20orf166-AS1Q96NR2 134 aa6.97□□□□□ -1.29
CLPTM1-208ENST00000588274 KRTAP9-3Q9BYQ3 159 aa6.97□□□□□ -1.29
CLPTM1-208ENST00000588274 NHP2Q9NX24 153 aaKnown RBP6.97□□□□□ -1.29
CLPTM1-208ENST00000588274 C20orf202A1L168 122 aa6.96□□□□□ -1.3
CLPTM1-208ENST00000588274 MUSTN1Q8IVN3 82 aa6.96□□□□□ -1.3
CLPTM1-208ENST00000588274 C3orf79P0CE67 100 aa6.95□□□□□ -1.3
CLPTM1-208ENST00000588274 KRTDAPP60985 99 aa6.95□□□□□ -1.3
CLPTM1-208ENST00000588274 Q6JHZ5 121 aa6.95□□□□□ -1.3
CLPTM1-208ENST00000588274 A8MUU9 505 aa6.94□□□□□ -1.3
CLPTM1-208ENST00000588274 F8WEM9 126 aa6.94□□□□□ -1.3
CLPTM1-208ENST00000588274 LINC00575Q6W349 94 aa6.94□□□□□ -1.3
CLPTM1-208ENST00000588274 SCGB1D4Q6XE38 83 aa6.94□□□□□ -1.3
CLPTM1-208ENST00000588274 Q6ZQY7 126 aa6.94□□□□□ -1.3
CLPTM1-208ENST00000588274 DLEU1O43261 78 aa6.93□□□□□ -1.3
CLPTM1-208ENST00000588274 Q6ZVH6 145 aa6.93□□□□□ -1.3
CLPTM1-208ENST00000588274 M0R143 59 aa6.92□□□□□ -1.3
CLPTM1-208ENST00000588274 PYY3Q5JQD4 70 aa6.92□□□□□ -1.3
CLPTM1-208ENST00000588274 Q96NJ1 140 aa6.92□□□□□ -1.3
CLPTM1-208ENST00000588274 TRAV13-2A0A0B4J235 113 aa6.91□□□□□ -1.3
CLPTM1-208ENST00000588274 KRTAP16-1A8MUX0 517 aa6.91□□□□□ -1.3
CLPTM1-208ENST00000588274 OCIAD2Q56VL3 154 aa6.91□□□□□ -1.3
CLPTM1-208ENST00000588274 COPS9Q8WXC6 57 aa6.91□□□□□ -1.3
CLPTM1-208ENST00000588274 SCGB1D1O95968 90 aa6.9□□□□□ -1.3
CLPTM1-208ENST00000588274 MPLKIPQ8TAP9 179 aa6.89□□□□□ -1.31
CLPTM1-208ENST00000588274 hADV29S1A0JD25 119 aa6.88□□□□□ -1.31
CLPTM1-208ENST00000588274 H3BUT2 72 aa6.86□□□□□ -1.31
CLPTM1-208ENST00000588274 LST1O00453 97 aa6.86□□□□□ -1.31
CLPTM1-208ENST00000588274 ATOH7Q8N100 152 aa6.86□□□□□ -1.31
CLPTM1-208ENST00000588274 TRBV20-1A0A075B6N2 111 aa6.84□□□□□ -1.31
CLPTM1-208ENST00000588274 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.84□□□□□ -1.31
CLPTM1-208ENST00000588274 HRES1P13985 223 aa6.83□□□□□ -1.32
CLPTM1-208ENST00000588274 PPDPFLQ8WWR9 84 aa6.83□□□□□ -1.32
CLPTM1-208ENST00000588274 KRTAP10-10P60014 251 aa6.82□□□□□ -1.32
CLPTM1-208ENST00000588274 VAMP3Q15836 100 aa6.82□□□□□ -1.32
CLPTM1-208ENST00000588274 KRTAP19-6Q3LI70 58 aa6.82□□□□□ -1.32
CLPTM1-208ENST00000588274 VAMP8Q9BV40 100 aa6.82□□□□□ -1.32
CLPTM1-208ENST00000588274 PAM16Q9Y3D7 125 aa6.8□□□□□ -1.32
CLPTM1-208ENST00000588274 DSCR10P59022 87 aa6.79□□□□□ -1.32
CLPTM1-208ENST00000588274 SPATA45Q537H7 98 aa6.79□□□□□ -1.32
CLPTM1-208ENST00000588274 SS18L2Q9UHA2 77 aa6.79□□□□□ -1.32
CLPTM1-208ENST00000588274 COL5A1-AS1Q5SY13 56 aa6.78□□□□□ -1.32
CLPTM1-208ENST00000588274 VPS25Q9BRG1 176 aa6.77□□□□□ -1.33
CLPTM1-208ENST00000588274 A0A087WSZ3 146 aa6.76□□□□□ -1.33
CLPTM1-208ENST00000588274 TEN1Q86WV5 123 aa6.76□□□□□ -1.33
CLPTM1-208ENST00000588274 SNHG12Q9BXW3 62 aa6.76□□□□□ -1.33
CLPTM1-208ENST00000588274 NOTCH2NLQ7Z3S9 236 aa6.75□□□□□ -1.33
CLPTM1-208ENST00000588274 NEBP20929 6669 aa6.74□□□□□ -1.33
CLPTM1-208ENST00000588274 FAM236DA0A1B0GTK5 79 aa6.74□□□□□ -1.33
CLPTM1-208ENST00000588274 FAM236CP0DP71 79 aa6.74□□□□□ -1.33
CLPTM1-208ENST00000588274 SCGB1A1P11684 91 aa6.74□□□□□ -1.33
CLPTM1-208ENST00000588274 MTURNQ8N3F0 131 aa6.74□□□□□ -1.33
CLPTM1-208ENST00000588274 A0A1B0GV72 72 aa6.73□□□□□ -1.33
CLPTM1-208ENST00000588274 K7ERU9 68 aa6.73□□□□□ -1.33
CLPTM1-208ENST00000588274 BVES-AS1Q5T3Y7 98 aa6.73□□□□□ -1.33
CLPTM1-208ENST00000588274 FAM218AQ96MZ4 157 aa6.72□□□□□ -1.33
CLPTM1-208ENST00000588274 A0A1W2PNM2 257 aa6.7□□□□□ -1.34
CLPTM1-208ENST00000588274 NDUFV3P56181 108 aaKnown RBP6.7□□□□□ -1.34
CLPTM1-208ENST00000588274 UBE2V1Q13404 147 aa6.7□□□□□ -1.34
CLPTM1-208ENST00000588274 RBM12B-AS1Q9P1G2 102 aa6.7□□□□□ -1.34
CLPTM1-208ENST00000588274 COX8AP10176 69 aa6.69□□□□□ -1.34
CLPTM1-208ENST00000588274 KRTAP6-3Q3LI67 103 aa6.69□□□□□ -1.34
CLPTM1-208ENST00000588274 SIGMAR1Q99720 223 aa6.69□□□□□ -1.34
CLPTM1-208ENST00000588274 UQCR10Q9UDW1 63 aa6.69□□□□□ -1.34
CLPTM1-208ENST00000588274 LINC00313P59037 77 aa6.67□□□□□ -1.34
CLPTM1-208ENST00000588274 H3BMG7 143 aa6.64□□□□□ -1.35
CLPTM1-208ENST00000588274 C2orf91Q6ZV80 131 aa6.64□□□□□ -1.35
CLPTM1-208ENST00000588274 IGKV4-1P06312 121 aa6.62□□□□□ -1.35
CLPTM1-208ENST00000588274 LINC00472Q9H8W2 130 aa6.62□□□□□ -1.35
CLPTM1-208ENST00000588274 LINC00846Q9NV44 126 aa6.62□□□□□ -1.35
CLPTM1-208ENST00000588274 HIST1H4GQ99525 98 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms