RNA–Protein interactions for RNA: ENST00000585229.1

SMCHD1-212, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-212ENST00000585229 PKHD1L1Q86WI1 4243 aa6.01□□□□□ -1.45
SMCHD1-212ENST00000585229 hADV29S1A0JD25 119 aa6.01□□□□□ -1.45
SMCHD1-212ENST00000585229 ZNF861PO60384 105 aa6.01□□□□□ -1.45
SMCHD1-212ENST00000585229 UBE2AP49459 152 aa6.01□□□□□ -1.45
SMCHD1-212ENST00000585229 RPL37AP61513 92 aaKnown RBP6.01□□□□□ -1.45
SMCHD1-212ENST00000585229 A0A1B0GV90 55 aa6□□□□□ -1.45
SMCHD1-212ENST00000585229 SLC25A20O43772 301 aa6□□□□□ -1.45
SMCHD1-212ENST00000585229 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6□□□□□ -1.45
SMCHD1-212ENST00000585229 ERC2-IT1O76042 136 aa5.99□□□□□ -1.45
SMCHD1-212ENST00000585229 SMR3BP02814 79 aaPredicted RBP5.99□□□□□ -1.45
SMCHD1-212ENST00000585229 GTF2H5Q6ZYL4 71 aa5.99□□□□□ -1.45
SMCHD1-212ENST00000585229 SNCGO76070 127 aa5.98□□□□□ -1.45
SMCHD1-212ENST00000585229 IGLV5-48A0A075B6I7 105 aa5.97□□□□□ -1.45
SMCHD1-212ENST00000585229 H3BMG7 143 aa5.97□□□□□ -1.45
SMCHD1-212ENST00000585229 DNAL4O96015 105 aa5.97□□□□□ -1.45
SMCHD1-212ENST00000585229 LINC01547P58512 204 aaPredicted RBP5.97□□□□□ -1.45
SMCHD1-212ENST00000585229 OCIAD2Q56VL3 154 aa5.97□□□□□ -1.45
SMCHD1-212ENST00000585229 Q6ZQY7 126 aa5.97□□□□□ -1.45
SMCHD1-212ENST00000585229 LINC01600Q96MT4 127 aa5.97□□□□□ -1.45
SMCHD1-212ENST00000585229 HIGD2AQ9BW72 106 aa5.97□□□□□ -1.45
SMCHD1-212ENST00000585229 SRRM2Q9UQ35 2752 aaKnown RBP5.97□□□□□ -1.45
SMCHD1-212ENST00000585229 HERC2O95714 4834 aa5.96□□□□□ -1.45
SMCHD1-212ENST00000585229 H3BQ85 93 aa5.96□□□□□ -1.46
SMCHD1-212ENST00000585229 SPRR1BP22528 89 aa5.96□□□□□ -1.46
SMCHD1-212ENST00000585229 PPDPFLQ8WWR9 84 aa5.96□□□□□ -1.46
SMCHD1-212ENST00000585229 PRO0461Q9UI25 63 aa5.96□□□□□ -1.46
SMCHD1-212ENST00000585229 H3BT86 120 aa5.95□□□□□ -1.46
SMCHD1-212ENST00000585229 UBE2V1Q13404 147 aa5.95□□□□□ -1.46
SMCHD1-212ENST00000585229 ST20-AS1Q8NBB2 130 aa5.95□□□□□ -1.46
SMCHD1-212ENST00000585229 SPRR4Q96PI1 79 aa5.95□□□□□ -1.46
SMCHD1-212ENST00000585229 ORMDL1Q9P0S3 153 aa5.95□□□□□ -1.46
SMCHD1-212ENST00000585229 C9JAW5 83 aa5.94□□□□□ -1.46
SMCHD1-212ENST00000585229 LINC00483Q53H64 154 aa5.94□□□□□ -1.46
SMCHD1-212ENST00000585229 Q5VSD8 79 aa5.94□□□□□ -1.46
SMCHD1-212ENST00000585229 SPINK6Q6UWN8 80 aa5.94□□□□□ -1.46
SMCHD1-212ENST00000585229 KRTAP17-1Q9BYP8 105 aa5.94□□□□□ -1.46
SMCHD1-212ENST00000585229 ZNF706Q9Y5V0 76 aaPredicted RBP5.94□□□□□ -1.46
SMCHD1-212ENST00000585229 Q8N377 158 aa5.93□□□□□ -1.46
SMCHD1-212ENST00000585229 TEX49A0A1B0GTD5 131 aa5.92□□□□□ -1.46
SMCHD1-212ENST00000585229 BAALC-AS2P0C853 105 aa5.92□□□□□ -1.46
SMCHD1-212ENST00000585229 F8W1H4 67 aa5.91□□□□□ -1.46
SMCHD1-212ENST00000585229 TMEM256-PLSCR3K7ERE1 68 aa5.91□□□□□ -1.46
SMCHD1-212ENST00000585229 ANKRD29Q8N6D5 301 aa5.91□□□□□ -1.46
SMCHD1-212ENST00000585229 KRTAP1-4P0C5Y4 121 aa5.9□□□□□ -1.46
SMCHD1-212ENST00000585229 SMIM29Q86T20 159 aa5.9□□□□□ -1.46
SMCHD1-212ENST00000585229 MTURNQ8N3F0 131 aa5.9□□□□□ -1.46
SMCHD1-212ENST00000585229 FAM229BQ4G0N7 80 aa5.89□□□□□ -1.47
SMCHD1-212ENST00000585229 GAGE2AQ6NT46 116 aa5.89□□□□□ -1.47
SMCHD1-212ENST00000585229 FAT3Q8TDW7 4589 aa5.88□□□□□ -1.47
SMCHD1-212ENST00000585229 DEFB105AQ8NG35 78 aa5.88□□□□□ -1.47
SMCHD1-212ENST00000585229 OBSCN-AS1Q96MR7 158 aa5.88□□□□□ -1.47
SMCHD1-212ENST00000585229 IGLV8-61A0A075B6I0 122 aa5.87□□□□□ -1.47
SMCHD1-212ENST00000585229 NDUFV3P56181 108 aaKnown RBP5.87□□□□□ -1.47
SMCHD1-212ENST00000585229 C3orf22Q8N5N4 141 aa5.86□□□□□ -1.47
SMCHD1-212ENST00000585229 LAMTOR3Q9UHA4 124 aa5.86□□□□□ -1.47
SMCHD1-212ENST00000585229 JMJD7-PLA2G4BH0Y9G9 81 aa5.85□□□□□ -1.47
SMCHD1-212ENST00000585229 TEN1Q86WV5 123 aa5.84□□□□□ -1.47
SMCHD1-212ENST00000585229 ANAPC11Q9NYG5 84 aa5.84□□□□□ -1.47
SMCHD1-212ENST00000585229 TRBV7-4A0A0J9YYF1 115 aa5.83□□□□□ -1.48
SMCHD1-212ENST00000585229 KRTAP13-2Q52LG2 175 aa5.83□□□□□ -1.48
SMCHD1-212ENST00000585229 LRP1Q07954 4544 aaKnown RBP5.82□□□□□ -1.48
SMCHD1-212ENST00000585229 A0A087X002 238 aa5.82□□□□□ -1.48
SMCHD1-212ENST00000585229 F8WEM9 126 aa5.82□□□□□ -1.48
SMCHD1-212ENST00000585229 CRYGAP11844 174 aa5.82□□□□□ -1.48
SMCHD1-212ENST00000585229 ETDBQ3ZM63 59 aa5.82□□□□□ -1.48
SMCHD1-212ENST00000585229 ABCA13Q86UQ4 5058 aa5.81□□□□□ -1.48
SMCHD1-212ENST00000585229 PCP4P48539 62 aa5.81□□□□□ -1.48
SMCHD1-212ENST00000585229 RBM3P98179 157 aaKnown RBP5.81□□□□□ -1.48
SMCHD1-212ENST00000585229 Q6JHZ5 121 aa5.81□□□□□ -1.48
SMCHD1-212ENST00000585229 Q8NBF4 154 aa5.81□□□□□ -1.48
SMCHD1-212ENST00000585229 LOC110117498A0A087WWA1 95 aa5.8□□□□□ -1.48
SMCHD1-212ENST00000585229 IGLV9-49A0A0B4J1Y8 123 aa5.8□□□□□ -1.48
SMCHD1-212ENST00000585229 SSBP3-AS1Q7Z2R9 100 aa5.8□□□□□ -1.48
SMCHD1-212ENST00000585229 PDE6GP18545 87 aa5.79□□□□□ -1.48
SMCHD1-212ENST00000585229 MOBPQ13875 183 aa5.79□□□□□ -1.48
SMCHD1-212ENST00000585229 IGFL1Q6UW32 110 aa5.79□□□□□ -1.48
SMCHD1-212ENST00000585229 C9orf153Q5TBE3 101 aa5.78□□□□□ -1.48
SMCHD1-212ENST00000585229 Q6Q795 121 aa5.78□□□□□ -1.48
SMCHD1-212ENST00000585229 Q6ZQT0 140 aa5.78□□□□□ -1.48
SMCHD1-212ENST00000585229 C14orf132Q9NPU4 83 aa5.78□□□□□ -1.48
SMCHD1-212ENST00000585229 MYCBP2O75592 4640 aa5.78□□□□□ -1.48
SMCHD1-212ENST00000585229 PRR26Q8N8Z3 221 aa5.77□□□□□ -1.49
SMCHD1-212ENST00000585229 DSCR8Q96T75 97 aa5.77□□□□□ -1.49
SMCHD1-212ENST00000585229 TNXBP22105 4242 aa5.77□□□□□ -1.49
SMCHD1-212ENST00000585229 A0A1B0GV72 72 aa5.76□□□□□ -1.49
SMCHD1-212ENST00000585229 FLG2Q5D862 2391 aaPredicted RBP5.75□□□□□ -1.49
SMCHD1-212ENST00000585229 A0A1W2PNM2 257 aa5.75□□□□□ -1.49
SMCHD1-212ENST00000585229 KRTAP10-8P60410 259 aa5.75□□□□□ -1.49
SMCHD1-212ENST00000585229 CD164Q04900 197 aa5.75□□□□□ -1.49
SMCHD1-212ENST00000585229 TYMSOSQ8TAI1 123 aa5.75□□□□□ -1.49
SMCHD1-212ENST00000585229 A0A1B0GW54 56 aa5.74□□□□□ -1.49
SMCHD1-212ENST00000585229 OXTP01178 125 aa5.74□□□□□ -1.49
SMCHD1-212ENST00000585229 CCKP06307 115 aa5.74□□□□□ -1.49
SMCHD1-212ENST00000585229 A0A0G2JQZ4 141 aa5.73□□□□□ -1.49
SMCHD1-212ENST00000585229 KRTAP29-1A8MX34 341 aaPredicted RBP5.72□□□□□ -1.49
SMCHD1-212ENST00000585229 MT1HL1P0DM35 61 aa5.72□□□□□ -1.49
SMCHD1-212ENST00000585229 TRBV7-7A0A0K0K1E9 115 aa5.71□□□□□ -1.5
SMCHD1-212ENST00000585229 FAM240AA0A1B0GVK7 77 aa5.71□□□□□ -1.5
SMCHD1-212ENST00000585229 SPAG11AQ6PDA7 123 aa5.71□□□□□ -1.5
SMCHD1-212ENST00000585229 RPS29P62273 56 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms