RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 SRRM2Q9UQ35 2752 aaKnown RBP8.5□□□□□ -1.05
UBBP4-202ENST00000584755 LOC110117498A0A087WWA1 95 aa8.48□□□□□ -1.05
UBBP4-202ENST00000584755 TRBV7-4A0A0J9YYF1 115 aa8.48□□□□□ -1.05
UBBP4-202ENST00000584755 SPRR4Q96PI1 79 aa8.48□□□□□ -1.05
UBBP4-202ENST00000584755 VPS13BQ7Z7G8 4022 aa8.48□□□□□ -1.05
UBBP4-202ENST00000584755 LINC00483Q53H64 154 aa8.47□□□□□ -1.05
UBBP4-202ENST00000584755 C3orf22Q8N5N4 141 aa8.47□□□□□ -1.05
UBBP4-202ENST00000584755 ZNF706Q9Y5V0 76 aaPredicted RBP8.47□□□□□ -1.05
UBBP4-202ENST00000584755 FAM240AA0A1B0GVK7 77 aa8.46□□□□□ -1.05
UBBP4-202ENST00000584755 GAGE2AQ6NT46 116 aa8.46□□□□□ -1.05
UBBP4-202ENST00000584755 PDE6GP18545 87 aa8.45□□□□□ -1.06
UBBP4-202ENST00000584755 Q6ZQT0 140 aa8.45□□□□□ -1.06
UBBP4-202ENST00000584755 DSCR8Q96T75 97 aa8.45□□□□□ -1.06
UBBP4-202ENST00000584755 IGLV8-61A0A075B6I0 122 aa8.45□□□□□ -1.06
UBBP4-202ENST00000584755 CCKP06307 115 aa8.45□□□□□ -1.06
UBBP4-202ENST00000584755 ACYP1P07311 99 aa8.42□□□□□ -1.06
UBBP4-202ENST00000584755 F8WEM9 126 aa8.41□□□□□ -1.06
UBBP4-202ENST00000584755 RPL37AP61513 92 aaKnown RBP8.41□□□□□ -1.06
UBBP4-202ENST00000584755 FAT1Q14517 4588 aa8.39□□□□□ -1.07
UBBP4-202ENST00000584755 CDK2AP2O75956 126 aa8.38□□□□□ -1.07
UBBP4-202ENST00000584755 SMR3BP02814 79 aaPredicted RBP8.38□□□□□ -1.07
UBBP4-202ENST00000584755 KRTAP10-4P60372 401 aaPredicted RBP8.38□□□□□ -1.07
UBBP4-202ENST00000584755 CDIP1Q9H305 208 aa8.38□□□□□ -1.07
UBBP4-202ENST00000584755 Q6JHZ5 121 aa8.36□□□□□ -1.07
UBBP4-202ENST00000584755 A0A1W2PNM2 257 aa8.35□□□□□ -1.07
UBBP4-202ENST00000584755 IGFL1Q6UW32 110 aa8.35□□□□□ -1.07
UBBP4-202ENST00000584755 A0A1B0GW54 56 aa8.34□□□□□ -1.07
UBBP4-202ENST00000584755 SPINK6Q6UWN8 80 aa8.34□□□□□ -1.07
UBBP4-202ENST00000584755 Q8NBF4 154 aa8.34□□□□□ -1.07
UBBP4-202ENST00000584755 LINC00846Q9NV44 126 aa8.34□□□□□ -1.07
UBBP4-202ENST00000584755 HSPG2P98160 4391 aa8.34□□□□□ -1.07
UBBP4-202ENST00000584755 ANAPC11Q9NYG5 84 aa8.33□□□□□ -1.08
UBBP4-202ENST00000584755 KRTAP1-4P0C5Y4 121 aa8.32□□□□□ -1.08
UBBP4-202ENST00000584755 FAM229BQ4G0N7 80 aa8.32□□□□□ -1.08
UBBP4-202ENST00000584755 ANAPC13Q9BS18 74 aa8.32□□□□□ -1.08
UBBP4-202ENST00000584755 RYR1P21817 5038 aa8.31□□□□□ -1.08
UBBP4-202ENST00000584755 IGLV9-49A0A0B4J1Y8 123 aa8.31□□□□□ -1.08
UBBP4-202ENST00000584755 Q6Q795 121 aa8.31□□□□□ -1.08
UBBP4-202ENST00000584755 EPPK1P58107 5090 aaKnown RBP8.3□□□□□ -1.08
UBBP4-202ENST00000584755 A0A0G2JQZ4 141 aa8.3□□□□□ -1.08
UBBP4-202ENST00000584755 CRYGAP11844 174 aa8.3□□□□□ -1.08
UBBP4-202ENST00000584755 C9orf153Q5TBE3 101 aa8.29□□□□□ -1.08
UBBP4-202ENST00000584755 SS18L2Q9UHA2 77 aa8.29□□□□□ -1.08
UBBP4-202ENST00000584755 MOBPQ13875 183 aa8.28□□□□□ -1.08
UBBP4-202ENST00000584755 A0A087X002 238 aa8.27□□□□□ -1.09
UBBP4-202ENST00000584755 FAM229AH3BQW9 127 aa8.27□□□□□ -1.09
UBBP4-202ENST00000584755 PLA2G1BP04054 148 aaKnown RBP8.27□□□□□ -1.09
UBBP4-202ENST00000584755 LINC00643Q86TS7 51 aa8.27□□□□□ -1.09
UBBP4-202ENST00000584755 KRTAP3-3Q9BYR6 98 aa8.27□□□□□ -1.09
UBBP4-202ENST00000584755 KRTAP3-2Q9BYR7 98 aa8.27□□□□□ -1.09
UBBP4-202ENST00000584755 PKHD1L1Q86WI1 4243 aa8.27□□□□□ -1.09
UBBP4-202ENST00000584755 SSBP3-AS1Q7Z2R9 100 aa8.26□□□□□ -1.09
UBBP4-202ENST00000584755 KRTAP13-2Q52LG2 175 aa8.26□□□□□ -1.09
UBBP4-202ENST00000584755 UBL5Q9BZL1 73 aa8.26□□□□□ -1.09
UBBP4-202ENST00000584755 TRBV7-7A0A0K0K1E9 115 aa8.25□□□□□ -1.09
UBBP4-202ENST00000584755 Q6ZVQ6 151 aa8.24□□□□□ -1.09
UBBP4-202ENST00000584755 C5orf47Q569G3 176 aa8.23□□□□□ -1.09
UBBP4-202ENST00000584755 MT-ATP8P03928 68 aa8.22□□□□□ -1.09
UBBP4-202ENST00000584755 Q5VSD8 79 aa8.22□□□□□ -1.09
UBBP4-202ENST00000584755 KRTAP17-1Q9BYP8 105 aa8.21□□□□□ -1.09
UBBP4-202ENST00000584755 KIAA1109Q2LD37 5005 aa8.21□□□□□ -1.09
UBBP4-202ENST00000584755 A0A087WSZ3 146 aa8.2□□□□□ -1.1
UBBP4-202ENST00000584755 CD164Q04900 197 aa8.2□□□□□ -1.1
UBBP4-202ENST00000584755 SMIM20Q8N5G0 67 aa8.2□□□□□ -1.1
UBBP4-202ENST00000584755 NREPQ16612 68 aa8.19□□□□□ -1.1
UBBP4-202ENST00000584755 ATP5EP2Q5VTU8 51 aa8.19□□□□□ -1.1
UBBP4-202ENST00000584755 Q8N1X5 172 aa8.18□□□□□ -1.1
UBBP4-202ENST00000584755 CXCL6P80162 114 aa8.16□□□□□ -1.1
UBBP4-202ENST00000584755 IMUPQ9GZP8 106 aa8.15□□□□□ -1.1
UBBP4-202ENST00000584755 IGKV3D-7A0A0C4DH55 119 aa8.14□□□□□ -1.11
UBBP4-202ENST00000584755 HRCT1Q6UXD1 115 aa8.14□□□□□ -1.11
UBBP4-202ENST00000584755 PRR26Q8N8Z3 221 aa8.14□□□□□ -1.11
UBBP4-202ENST00000584755 TYMSOSQ8TAI1 123 aa8.14□□□□□ -1.11
UBBP4-202ENST00000584755 LINC00472Q9H8W2 130 aa8.13□□□□□ -1.11
UBBP4-202ENST00000584755 BPY2O14599 106 aa8.11□□□□□ -1.11
UBBP4-202ENST00000584755 Q5XG85 94 aa8.11□□□□□ -1.11
UBBP4-202ENST00000584755 ASB16-AS1Q495Z4 193 aa8.09□□□□□ -1.11
UBBP4-202ENST00000584755 Q96NJ1 140 aa8.09□□□□□ -1.11
UBBP4-202ENST00000584755 RPS28P62857 69 aaKnown RBP8.08□□□□□ -1.12
UBBP4-202ENST00000584755 DSCR10P59022 87 aa8.07□□□□□ -1.12
UBBP4-202ENST00000584755 CCDC179H3BU77 68 aa8.06□□□□□ -1.12
UBBP4-202ENST00000584755 SPINK1P00995 79 aa8.06□□□□□ -1.12
UBBP4-202ENST00000584755 RPS29P62273 56 aaKnown RBP8.06□□□□□ -1.12
UBBP4-202ENST00000584755 SPAG11AQ6PDA7 123 aa8.06□□□□□ -1.12
UBBP4-202ENST00000584755 LINC00304Q8N9R0 145 aa8.06□□□□□ -1.12
UBBP4-202ENST00000584755 BIRC6Q9NR09 4857 aa8.06□□□□□ -1.12
UBBP4-202ENST00000584755 FAT3Q8TDW7 4589 aa8.06□□□□□ -1.12
UBBP4-202ENST00000584755 LRP1Q07954 4544 aaKnown RBP8.06□□□□□ -1.12
UBBP4-202ENST00000584755 J3KT08 172 aa8.05□□□□□ -1.12
UBBP4-202ENST00000584755 C4orf48Q5BLP8 95 aa8.05□□□□□ -1.12
UBBP4-202ENST00000584755 TNXBP22105 4242 aa8.04□□□□□ -1.12
UBBP4-202ENST00000584755 IGKV4-1P06312 121 aa8.04□□□□□ -1.12
UBBP4-202ENST00000584755 KRTAP10-8P60410 259 aa8.04□□□□□ -1.12
UBBP4-202ENST00000584755 DEFB116Q30KQ4 102 aa8.04□□□□□ -1.12
UBBP4-202ENST00000584755 LIMD2Q9BT23 127 aa8.04□□□□□ -1.12
UBBP4-202ENST00000584755 HIST1H4AP62805 103 aaKnown RBP8.03□□□□□ -1.12
UBBP4-202ENST00000584755 Q8N9L7 120 aa8.02□□□□□ -1.13
UBBP4-202ENST00000584755 A0A087WVE0 104 aa8.01□□□□□ -1.13
UBBP4-202ENST00000584755 A8MWP4 228 aa8□□□□□ -1.13
UBBP4-202ENST00000584755 K7EQZ3 153 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms