RNA–Protein interactions for RNA: ENST00000584668.5

SRSF1-207, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 758 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-207ENST00000584668 PCP4L1A6NKN8 68 aa4.31□□□□□ -1.72
SRSF1-207ENST00000584668 E9PLD3 99 aa4.31□□□□□ -1.72
SRSF1-207ENST00000584668 HIST1H2BKO60814 126 aa4.31□□□□□ -1.72
SRSF1-207ENST00000584668 TRGC2P03986 189 aa4.31□□□□□ -1.72
SRSF1-207ENST00000584668 HIST1H2BJP06899 126 aa4.31□□□□□ -1.72
SRSF1-207ENST00000584668 HIST1H2BOP23527 126 aa4.31□□□□□ -1.72
SRSF1-207ENST00000584668 HIST1H2BBP33778 126 aa4.31□□□□□ -1.72
SRSF1-207ENST00000584668 HIST1H2BDP58876 126 aa4.31□□□□□ -1.72
SRSF1-207ENST00000584668 HIST1H2BCP62807 126 aa4.31□□□□□ -1.72
SRSF1-207ENST00000584668 HIST2H2BEQ16778 126 aa4.31□□□□□ -1.72
SRSF1-207ENST00000584668 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.31□□□□□ -1.72
SRSF1-207ENST00000584668 CLEC2BQ92478 149 aa4.31□□□□□ -1.72
SRSF1-207ENST00000584668 HIST1H2BHQ93079 126 aa4.31□□□□□ -1.72
SRSF1-207ENST00000584668 Q96NJ1 140 aa4.31□□□□□ -1.72
SRSF1-207ENST00000584668 HIST1H2BNQ99877 126 aa4.31□□□□□ -1.72
SRSF1-207ENST00000584668 HIST1H2BMQ99879 126 aa4.31□□□□□ -1.72
SRSF1-207ENST00000584668 EIF4EBP3O60516 100 aaPredicted RBP4.3□□□□□ -1.72
SRSF1-207ENST00000584668 MT2AP02795 61 aa4.3□□□□□ -1.72
SRSF1-207ENST00000584668 KRTAP10-10P60014 251 aa4.3□□□□□ -1.72
SRSF1-207ENST00000584668 HIST3H2BBQ8N257 126 aa4.3□□□□□ -1.72
SRSF1-207ENST00000584668 RBM12B-AS1Q9P1G2 102 aa4.3□□□□□ -1.72
SRSF1-207ENST00000584668 TRAV13-2A0A0B4J235 113 aa4.29□□□□□ -1.72
SRSF1-207ENST00000584668 A0A0G2JQZ4 141 aa4.29□□□□□ -1.72
SRSF1-207ENST00000584668 TRBV7-7A0A0K0K1E9 115 aa4.29□□□□□ -1.72
SRSF1-207ENST00000584668 COA6Q5JTJ3 125 aaKnown RBP4.29□□□□□ -1.72
SRSF1-207ENST00000584668 A6NDN8 102 aa4.28□□□□□ -1.72
SRSF1-207ENST00000584668 LST1O00453 97 aa4.28□□□□□ -1.72
SRSF1-207ENST00000584668 IGFL1Q6UW32 110 aa4.28□□□□□ -1.72
SRSF1-207ENST00000584668 PMCHL2Q9BQD1 86 aa4.28□□□□□ -1.72
SRSF1-207ENST00000584668 SS18L2Q9UHA2 77 aa4.28□□□□□ -1.72
SRSF1-207ENST00000584668 TSTD3H0UI37 97 aa4.27□□□□□ -1.73
SRSF1-207ENST00000584668 FABP4P15090 132 aa4.27□□□□□ -1.73
SRSF1-207ENST00000584668 C20orf166-AS1Q96NR2 134 aa4.27□□□□□ -1.73
SRSF1-207ENST00000584668 LITAFQ99732 161 aa4.27□□□□□ -1.73
SRSF1-207ENST00000584668 SERF1AO75920 110 aa4.26□□□□□ -1.73
SRSF1-207ENST00000584668 VAMP3Q15836 100 aa4.26□□□□□ -1.73
SRSF1-207ENST00000584668 HIST1H2BLQ99880 126 aa4.26□□□□□ -1.73
SRSF1-207ENST00000584668 KRTAP4-8A0A0G2JLE6 195 aa4.25□□□□□ -1.73
SRSF1-207ENST00000584668 SCGB1D1O95968 90 aa4.25□□□□□ -1.73
SRSF1-207ENST00000584668 MT1FP04733 61 aa4.25□□□□□ -1.73
SRSF1-207ENST00000584668 PYY3Q5JQD4 70 aa4.25□□□□□ -1.73
SRSF1-207ENST00000584668 SCGB1D4Q6XE38 83 aa4.25□□□□□ -1.73
SRSF1-207ENST00000584668 MTURNQ8N3F0 131 aa4.25□□□□□ -1.73
SRSF1-207ENST00000584668 A8MUU9 505 aa4.24□□□□□ -1.73
SRSF1-207ENST00000584668 IFITM1P13164 125 aa4.24□□□□□ -1.73
SRSF1-207ENST00000584668 KRTAP4-12Q9BQ66 201 aa4.24□□□□□ -1.73
SRSF1-207ENST00000584668 KRTAP9-3Q9BYQ3 159 aa4.24□□□□□ -1.73
SRSF1-207ENST00000584668 Q6ZVH6 145 aa4.23□□□□□ -1.73
SRSF1-207ENST00000584668 KRTAP9-9Q9BYP9 154 aa4.23□□□□□ -1.73
SRSF1-207ENST00000584668 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
SRSF1-207ENST00000584668 KRTAP6-3Q3LI67 103 aa4.22□□□□□ -1.73
SRSF1-207ENST00000584668 KRTAP19-6Q3LI70 58 aa4.22□□□□□ -1.73
SRSF1-207ENST00000584668 PPDPFLQ8WWR9 84 aa4.22□□□□□ -1.73
SRSF1-207ENST00000584668 NEBP20929 6669 aa4.22□□□□□ -1.73
SRSF1-207ENST00000584668 OCIAD2Q56VL3 154 aa4.21□□□□□ -1.74
SRSF1-207ENST00000584668 Q6ZQY7 126 aa4.21□□□□□ -1.74
SRSF1-207ENST00000584668 hADV29S1A0JD25 119 aa4.2□□□□□ -1.74
SRSF1-207ENST00000584668 SMIM11BQ8TCY0 68 aa4.2□□□□□ -1.74
SRSF1-207ENST00000584668 SNHG12Q9BXW3 62 aa4.2□□□□□ -1.74
SRSF1-207ENST00000584668 SYS1-DBNDD2H3BUS1 97 aa4.19□□□□□ -1.74
SRSF1-207ENST00000584668 LINC00310P59036 64 aa4.18□□□□□ -1.74
SRSF1-207ENST00000584668 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.18□□□□□ -1.74
SRSF1-207ENST00000584668 LINC00575Q6W349 94 aa4.18□□□□□ -1.74
SRSF1-207ENST00000584668 SIGMAR1Q99720 223 aa4.17□□□□□ -1.74
SRSF1-207ENST00000584668 VAMP8Q9BV40 100 aa4.17□□□□□ -1.74
SRSF1-207ENST00000584668 A8MWP4 228 aa4.16□□□□□ -1.74
SRSF1-207ENST00000584668 SNCGO76070 127 aa4.16□□□□□ -1.74
SRSF1-207ENST00000584668 DSCR10P59022 87 aa4.16□□□□□ -1.74
SRSF1-207ENST00000584668 KRTDAPP60985 99 aa4.16□□□□□ -1.74
SRSF1-207ENST00000584668 ANKRD39Q53RE8 183 aa4.16□□□□□ -1.74
SRSF1-207ENST00000584668 LINC01545Q5VT33 79 aa4.16□□□□□ -1.74
SRSF1-207ENST00000584668 PET117Q6UWS5 81 aa4.16□□□□□ -1.74
SRSF1-207ENST00000584668 TEN1Q86WV5 123 aa4.16□□□□□ -1.74
SRSF1-207ENST00000584668 C14orf144Q96I85 54 aa4.16□□□□□ -1.74
SRSF1-207ENST00000584668 M0R143 59 aa4.15□□□□□ -1.75
SRSF1-207ENST00000584668 LINC00313P59037 77 aa4.15□□□□□ -1.75
SRSF1-207ENST00000584668 MUSTN1Q8IVN3 82 aa4.15□□□□□ -1.75
SRSF1-207ENST00000584668 TTTY13Q9BZ97 58 aa4.15□□□□□ -1.75
SRSF1-207ENST00000584668 H3BUT2 72 aa4.14□□□□□ -1.75
SRSF1-207ENST00000584668 HRES1P13985 223 aa4.14□□□□□ -1.75
SRSF1-207ENST00000584668 BVES-AS1Q5T3Y7 98 aa4.14□□□□□ -1.75
SRSF1-207ENST00000584668 MPLKIPQ8TAP9 179 aa4.14□□□□□ -1.75
SRSF1-207ENST00000584668 KRTAP4-7Q9BYR0 210 aa4.14□□□□□ -1.75
SRSF1-207ENST00000584668 A0A087WSZ3 146 aa4.13□□□□□ -1.75
SRSF1-207ENST00000584668 GHRHP01286 108 aa4.13□□□□□ -1.75
SRSF1-207ENST00000584668 C3orf79P0CE67 100 aa4.13□□□□□ -1.75
SRSF1-207ENST00000584668 UQCR10Q9UDW1 63 aa4.13□□□□□ -1.75
SRSF1-207ENST00000584668 HSBP1L1C9JCN9 74 aa4.12□□□□□ -1.75
SRSF1-207ENST00000584668 SPATA45Q537H7 98 aa4.12□□□□□ -1.75
SRSF1-207ENST00000584668 PAM16Q9Y3D7 125 aa4.12□□□□□ -1.75
SRSF1-207ENST00000584668 IGKV4-1P06312 121 aa4.09□□□□□ -1.75
SRSF1-207ENST00000584668 COL5A1-AS1Q5SY13 56 aa4.09□□□□□ -1.75
SRSF1-207ENST00000584668 NOTCH2NLQ7Z3S9 236 aa4.09□□□□□ -1.75
SRSF1-207ENST00000584668 MUC12Q9UKN1 5478 aa4.09□□□□□ -1.76
SRSF1-207ENST00000584668 A0A1B0GV90 55 aa4.08□□□□□ -1.76
SRSF1-207ENST00000584668 KRTAP20-1Q3LI63 56 aa4.08□□□□□ -1.76
SRSF1-207ENST00000584668 Q8N9P0 234 aaPredicted RBP4.08□□□□□ -1.76
SRSF1-207ENST00000584668 KRTAP16-1A8MUX0 517 aa4.07□□□□□ -1.76
SRSF1-207ENST00000584668 NDUFV3P56181 108 aaKnown RBP4.07□□□□□ -1.76
SRSF1-207ENST00000584668 SVIPQ8NHG7 77 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms