RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.04□□□□□ -0.48
CASC3-207ENST00000581849 PPDPFLQ8WWR9 84 aa12.04□□□□□ -0.48
CASC3-207ENST00000581849 BVES-AS1Q5T3Y7 98 aa12.03□□□□□ -0.48
CASC3-207ENST00000581849 COX8AP10176 69 aa12.02□□□□□ -0.49
CASC3-207ENST00000581849 KRTAP19-2Q3LHN2 52 aa12.02□□□□□ -0.49
CASC3-207ENST00000581849 CLEC2BQ92478 149 aa12.02□□□□□ -0.49
CASC3-207ENST00000581849 HIST1H4GQ99525 98 aa12.02□□□□□ -0.49
CASC3-207ENST00000581849 DLEU1O43261 78 aa12.01□□□□□ -0.49
CASC3-207ENST00000581849 SCGB1D1O95968 90 aa12.01□□□□□ -0.49
CASC3-207ENST00000581849 RPL37P61927 97 aaKnown RBP12.01□□□□□ -0.49
CASC3-207ENST00000581849 OCIAD2Q56VL3 154 aa11.99□□□□□ -0.49
CASC3-207ENST00000581849 TRBV7-7A0A0K0K1E9 115 aa11.98□□□□□ -0.49
CASC3-207ENST00000581849 IGFL1Q6UW32 110 aa11.98□□□□□ -0.49
CASC3-207ENST00000581849 C12orf57Q99622 126 aa11.97□□□□□ -0.49
CASC3-207ENST00000581849 KRTAP9-6A0A140TA67 174 aa11.94□□□□□ -0.5
CASC3-207ENST00000581849 LCE2DQ5TA82 110 aaPredicted RBP11.94□□□□□ -0.5
CASC3-207ENST00000581849 SNHG12Q9BXW3 62 aa11.92□□□□□ -0.5
CASC3-207ENST00000581849 MT1HP80294 61 aa11.91□□□□□ -0.5
CASC3-207ENST00000581849 HIGD1BQ9P298 99 aa11.91□□□□□ -0.5
CASC3-207ENST00000581849 SNCGO76070 127 aa11.89□□□□□ -0.51
CASC3-207ENST00000581849 CFC1BP0CG36 223 aa11.89□□□□□ -0.51
CASC3-207ENST00000581849 CFC1P0CG37 223 aa11.89□□□□□ -0.51
CASC3-207ENST00000581849 A0A0B4J2C4 111 aa11.88□□□□□ -0.51
CASC3-207ENST00000581849 H0YGX0 51 aa11.88□□□□□ -0.51
CASC3-207ENST00000581849 RAB37Q96AX2 223 aa11.88□□□□□ -0.51
CASC3-207ENST00000581849 C14orf144Q96I85 54 aa11.85□□□□□ -0.51
CASC3-207ENST00000581849 SPATA45Q537H7 98 aa11.84□□□□□ -0.51
CASC3-207ENST00000581849 Q6Q795 121 aa11.83□□□□□ -0.52
CASC3-207ENST00000581849 PAM16Q9Y3D7 125 aa11.83□□□□□ -0.52
CASC3-207ENST00000581849 H3BUT2 72 aa11.82□□□□□ -0.52
CASC3-207ENST00000581849 LST1O00453 97 aa11.82□□□□□ -0.52
CASC3-207ENST00000581849 SS18L2Q9UHA2 77 aa11.82□□□□□ -0.52
CASC3-207ENST00000581849 VAMP8Q9BV40 100 aa11.81□□□□□ -0.52
CASC3-207ENST00000581849 GHRHP01286 108 aa11.8□□□□□ -0.52
CASC3-207ENST00000581849 C2orf91Q6ZV80 131 aa11.8□□□□□ -0.52
CASC3-207ENST00000581849 Q75L30 129 aa11.8□□□□□ -0.52
CASC3-207ENST00000581849 A0A1B0GX51 115 aa11.79□□□□□ -0.52
CASC3-207ENST00000581849 TMEM238LA0A1B0GVL6 79 aa11.77□□□□□ -0.53
CASC3-207ENST00000581849 A6NJY4 79 aa11.77□□□□□ -0.53
CASC3-207ENST00000581849 NDUFV3P56181 108 aaKnown RBP11.77□□□□□ -0.53
CASC3-207ENST00000581849 TEN1Q86WV5 123 aa11.77□□□□□ -0.53
CASC3-207ENST00000581849 OBSCN-AS1Q96MR7 158 aa11.77□□□□□ -0.53
CASC3-207ENST00000581849 FAM218AQ96MZ4 157 aa11.77□□□□□ -0.53
CASC3-207ENST00000581849 CEND1Q8N111 149 aa11.76□□□□□ -0.53
CASC3-207ENST00000581849 COX6B2Q6YFQ2 88 aa11.74□□□□□ -0.53
CASC3-207ENST00000581849 ATP11AUNQ6ZP68 121 aa11.74□□□□□ -0.53
CASC3-207ENST00000581849 PRO1854Q9UHT4 67 aa11.74□□□□□ -0.53
CASC3-207ENST00000581849 LORP23490 312 aaPredicted RBP11.72□□□□□ -0.53
CASC3-207ENST00000581849 KRTAP10-6P60371 365 aaPredicted RBP11.7□□□□□ -0.54
CASC3-207ENST00000581849 H3BMG7 143 aa11.68□□□□□ -0.54
CASC3-207ENST00000581849 A0A087WSZ3 146 aa11.67□□□□□ -0.54
CASC3-207ENST00000581849 FXYD2P54710 66 aa11.67□□□□□ -0.54
CASC3-207ENST00000581849 FLGP20930 4061 aaPredicted RBP11.66□□□□□ -0.54
CASC3-207ENST00000581849 M0R2T5 61 aa11.66□□□□□ -0.54
CASC3-207ENST00000581849 Q96NJ1 140 aa11.66□□□□□ -0.54
CASC3-207ENST00000581849 FSIP2Q5CZC0 6907 aa11.66□□□□□ -0.54
CASC3-207ENST00000581849 FABP2P12104 132 aa11.65□□□□□ -0.54
CASC3-207ENST00000581849 C20orf166-AS1Q96NR2 134 aa11.65□□□□□ -0.54
CASC3-207ENST00000581849 TRIAP1O43715 76 aa11.64□□□□□ -0.55
CASC3-207ENST00000581849 H3BQ85 93 aa11.63□□□□□ -0.55
CASC3-207ENST00000581849 CRCT1Q9UGL9 99 aa11.62□□□□□ -0.55
CASC3-207ENST00000581849 A8MUU9 505 aa11.61□□□□□ -0.55
CASC3-207ENST00000581849 HSD52Q0P140 79 aa11.6□□□□□ -0.55
CASC3-207ENST00000581849 TMA7Q9Y2S6 64 aaKnown RBP11.6□□□□□ -0.55
CASC3-207ENST00000581849 A0A1W2PNM2 257 aa11.59□□□□□ -0.55
CASC3-207ENST00000581849 DNAL4O96015 105 aa11.59□□□□□ -0.55
CASC3-207ENST00000581849 ORMDL1Q9P0S3 153 aa11.58□□□□□ -0.56
CASC3-207ENST00000581849 TRBV7-4A0A0J9YYF1 115 aa11.55□□□□□ -0.56
CASC3-207ENST00000581849 COX6CP09669 75 aa11.55□□□□□ -0.56
CASC3-207ENST00000581849 PYY3Q5JQD4 70 aa11.55□□□□□ -0.56
CASC3-207ENST00000581849 ANKRD29Q8N6D5 301 aa11.55□□□□□ -0.56
CASC3-207ENST00000581849 TMEM256-PLSCR3K7ERE1 68 aa11.53□□□□□ -0.56
CASC3-207ENST00000581849 PSMB2P49721 201 aa11.53□□□□□ -0.56
CASC3-207ENST00000581849 SIGMAR1Q99720 223 aa11.52□□□□□ -0.57
CASC3-207ENST00000581849 K7ERJ3 54 aa11.49□□□□□ -0.57
CASC3-207ENST00000581849 DSCR10P59022 87 aa11.49□□□□□ -0.57
CASC3-207ENST00000581849 IGKV4-1P06312 121 aa11.46□□□□□ -0.57
CASC3-207ENST00000581849 LINC00313P59037 77 aa11.46□□□□□ -0.57
CASC3-207ENST00000581849 UBE2V1Q13404 147 aa11.46□□□□□ -0.57
CASC3-207ENST00000581849 UQCR10Q9UDW1 63 aa11.46□□□□□ -0.57
CASC3-207ENST00000581849 TRBV20-1A0A075B6N2 111 aa11.45□□□□□ -0.58
CASC3-207ENST00000581849 TRACP01848 142 aa11.43□□□□□ -0.58
CASC3-207ENST00000581849 CCKP06307 115 aa11.43□□□□□ -0.58
CASC3-207ENST00000581849 LINC00472Q9H8W2 130 aa11.43□□□□□ -0.58
CASC3-207ENST00000581849 KRTAP16-1A8MUX0 517 aa11.42□□□□□ -0.58
CASC3-207ENST00000581849 A0A1B0GV72 72 aa11.4□□□□□ -0.58
CASC3-207ENST00000581849 RBM3P98179 157 aaKnown RBP11.34□□□□□ -0.59
CASC3-207ENST00000581849 SCGB1C2P0DMR2 95 aa11.33□□□□□ -0.6
CASC3-207ENST00000581849 C21orf62-AS1Q17RA5 79 aa11.33□□□□□ -0.6
CASC3-207ENST00000581849 LOC105371267A0A1B0GV96 52 aa11.32□□□□□ -0.6
CASC3-207ENST00000581849 DEFB116Q30KQ4 102 aa11.32□□□□□ -0.6
CASC3-207ENST00000581849 NOTCH2NLQ7Z3S9 236 aa11.32□□□□□ -0.6
CASC3-207ENST00000581849 DSCR8Q96T75 97 aa11.32□□□□□ -0.6
CASC3-207ENST00000581849 IGHV6-1A0A0B4J1U7 121 aa11.3□□□□□ -0.6
CASC3-207ENST00000581849 C8orf87E5RJ46 101 aa11.3□□□□□ -0.6
CASC3-207ENST00000581849 A0A1B0GVX0 72 aa11.27□□□□□ -0.61
CASC3-207ENST00000581849 VPS25Q9BRG1 176 aa11.27□□□□□ -0.61
CASC3-207ENST00000581849 MPLKIPQ8TAP9 179 aa11.26□□□□□ -0.61
CASC3-207ENST00000581849 J3KT08 172 aa11.25□□□□□ -0.61
CASC3-207ENST00000581849 KRTAP9-8Q9BYQ0 159 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms