RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 HERVK_113P61574 105 aa3.91□□□□□ -1.78
SMARCE1-217ENST00000580654 PEA15Q15121 130 aa3.91□□□□□ -1.78
SMARCE1-217ENST00000580654 C9JQL5 133 aa3.9□□□□□ -1.79
SMARCE1-217ENST00000580654 C9orf153Q5TBE3 101 aa3.9□□□□□ -1.79
SMARCE1-217ENST00000580654 HRCT1Q6UXD1 115 aa3.9□□□□□ -1.79
SMARCE1-217ENST00000580654 KCNQ1DNQ9H478 68 aa3.9□□□□□ -1.79
SMARCE1-217ENST00000580654 COL5A1-AS1Q5SY13 56 aa3.89□□□□□ -1.79
SMARCE1-217ENST00000580654 SCGB3A1Q96QR1 104 aa3.89□□□□□ -1.79
SMARCE1-217ENST00000580654 Q9BRP9 147 aa3.89□□□□□ -1.79
SMARCE1-217ENST00000580654 LIMD2Q9BT23 127 aa3.89□□□□□ -1.79
SMARCE1-217ENST00000580654 NXT2Q9NPJ8 142 aaKnown RBP3.89□□□□□ -1.79
SMARCE1-217ENST00000580654 ETDCA0A1B0GVM5 59 aa3.88□□□□□ -1.79
SMARCE1-217ENST00000580654 K7EMI3 77 aa3.88□□□□□ -1.79
SMARCE1-217ENST00000580654 PRAC1Q96KF2 57 aa3.88□□□□□ -1.79
SMARCE1-217ENST00000580654 COX17Q14061 63 aa3.87□□□□□ -1.79
SMARCE1-217ENST00000580654 GTF2H5Q6ZYL4 71 aa3.87□□□□□ -1.79
SMARCE1-217ENST00000580654 PRR15Q8IV56 129 aa3.87□□□□□ -1.79
SMARCE1-217ENST00000580654 TOMM6Q96B49 74 aa3.87□□□□□ -1.79
SMARCE1-217ENST00000580654 ZNF625Q96I27 306 aaPredicted RBP3.87□□□□□ -1.79
SMARCE1-217ENST00000580654 SPANXDQ9BXN6 97 aa3.87□□□□□ -1.79
SMARCE1-217ENST00000580654 KMT2DO14686 5537 aa3.86□□□□□ -1.79
SMARCE1-217ENST00000580654 TRAV9-1A0A075B6T8 112 aa3.86□□□□□ -1.79
SMARCE1-217ENST00000580654 H3BRM9 83 aa3.86□□□□□ -1.79
SMARCE1-217ENST00000580654 J3QQQ9 107 aa3.86□□□□□ -1.79
SMARCE1-217ENST00000580654 KRTAP2-3P0C7H8 128 aa3.86□□□□□ -1.79
SMARCE1-217ENST00000580654 SNHG12Q9BXW3 62 aa3.86□□□□□ -1.79
SMARCE1-217ENST00000580654 KRTAP2-4Q9BYR9 128 aa3.86□□□□□ -1.79
SMARCE1-217ENST00000580654 NCR3O14931 201 aa3.85□□□□□ -1.79
SMARCE1-217ENST00000580654 ADCYAP1P18509 176 aa3.85□□□□□ -1.79
SMARCE1-217ENST00000580654 Q5XG85 94 aa3.85□□□□□ -1.79
SMARCE1-217ENST00000580654 TRBV10-3A0A0K0K1G6 114 aa3.84□□□□□ -1.79
SMARCE1-217ENST00000580654 LST1O00453 97 aa3.84□□□□□ -1.79
SMARCE1-217ENST00000580654 MT-ND4LP03901 98 aa3.84□□□□□ -1.79
SMARCE1-217ENST00000580654 NDUFA6P56556 154 aa3.84□□□□□ -1.79
SMARCE1-217ENST00000580654 KRTAP5-1Q6L8H4 278 aa3.84□□□□□ -1.79
SMARCE1-217ENST00000580654 KTN1-AS1Q86SY8 53 aa3.84□□□□□ -1.79
SMARCE1-217ENST00000580654 ST20-AS1Q8NBB2 130 aa3.84□□□□□ -1.79
SMARCE1-217ENST00000580654 MDN1Q9NU22 5596 aa3.84□□□□□ -1.8
SMARCE1-217ENST00000580654 LINC01549A6NIU2 74 aa3.83□□□□□ -1.8
SMARCE1-217ENST00000580654 TRGC2P03986 189 aa3.83□□□□□ -1.8
SMARCE1-217ENST00000580654 LINC00158P58513 81 aa3.83□□□□□ -1.8
SMARCE1-217ENST00000580654 Q6ZRX8 168 aa3.83□□□□□ -1.8
SMARCE1-217ENST00000580654 KRTAP2-2Q9BYT5 123 aa3.83□□□□□ -1.8
SMARCE1-217ENST00000580654 TRBV7-6A0A0J9YX20 115 aa3.82□□□□□ -1.8
SMARCE1-217ENST00000580654 A8MUN3 132 aa3.82□□□□□ -1.8
SMARCE1-217ENST00000580654 H7C2G1 150 aa3.82□□□□□ -1.8
SMARCE1-217ENST00000580654 LGALS3P17931 250 aaKnown RBP3.82□□□□□ -1.8
SMARCE1-217ENST00000580654 LINC00313P59037 77 aa3.82□□□□□ -1.8
SMARCE1-217ENST00000580654 HSD52Q0P140 79 aa3.82□□□□□ -1.8
SMARCE1-217ENST00000580654 SLC25A34Q6PIV7 304 aa3.81□□□□□ -1.8
SMARCE1-217ENST00000580654 SMCO4Q9NRQ5 59 aa3.81□□□□□ -1.8
SMARCE1-217ENST00000580654 GPR98Q8WXG9 6306 aa3.8□□□□□ -1.8
SMARCE1-217ENST00000580654 S100A2P29034 98 aa3.8□□□□□ -1.8
SMARCE1-217ENST00000580654 A0A1B0GW54 56 aa3.79□□□□□ -1.8
SMARCE1-217ENST00000580654 TAX1BP3O14907 124 aa3.79□□□□□ -1.8
SMARCE1-217ENST00000580654 IGLC3P0DOY3 106 aa3.79□□□□□ -1.8
SMARCE1-217ENST00000580654 ZNF22P17026 224 aaPredicted RBP3.79□□□□□ -1.8
SMARCE1-217ENST00000580654 SPRR1BP22528 89 aa3.79□□□□□ -1.8
SMARCE1-217ENST00000580654 MEIG1Q5JSS6 88 aa3.79□□□□□ -1.8
SMARCE1-217ENST00000580654 TMEM170BQ5T4T1 132 aa3.79□□□□□ -1.8
SMARCE1-217ENST00000580654 SFTA2Q6UW10 78 aa3.79□□□□□ -1.8
SMARCE1-217ENST00000580654 ATP11AUNQ6ZP68 121 aa3.79□□□□□ -1.8
SMARCE1-217ENST00000580654 LCA10Q71F78 164 aa3.79□□□□□ -1.8
SMARCE1-217ENST00000580654 SMIM29Q86T20 159 aa3.79□□□□□ -1.8
SMARCE1-217ENST00000580654 KRTAP5-9P26371 169 aa3.78□□□□□ -1.8
SMARCE1-217ENST00000580654 ADAMTSL4-AS1Q5T5F5 129 aa3.78□□□□□ -1.8
SMARCE1-217ENST00000580654 C20orf166-AS1Q96NR2 134 aa3.78□□□□□ -1.8
SMARCE1-217ENST00000580654 LINC01546A6NGU7 62 aa3.77□□□□□ -1.81
SMARCE1-217ENST00000580654 ZNF73O43830 326 aaPredicted RBP3.77□□□□□ -1.81
SMARCE1-217ENST00000580654 SMIM13P0DJ93 91 aa3.77□□□□□ -1.81
SMARCE1-217ENST00000580654 HIST1H2BOP23527 126 aa3.77□□□□□ -1.81
SMARCE1-217ENST00000580654 HIST1H2BBP33778 126 aa3.77□□□□□ -1.81
SMARCE1-217ENST00000580654 HIST1H2BDP58876 126 aa3.77□□□□□ -1.81
SMARCE1-217ENST00000580654 HIST1H2BCP62807 126 aa3.77□□□□□ -1.81
SMARCE1-217ENST00000580654 HIST2H2BEQ16778 126 aa3.77□□□□□ -1.81
SMARCE1-217ENST00000580654 Q1RN00 199 aa3.77□□□□□ -1.81
SMARCE1-217ENST00000580654 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.77□□□□□ -1.81
SMARCE1-217ENST00000580654 BAGE3Q86Y29 109 aa3.77□□□□□ -1.81
SMARCE1-217ENST00000580654 HIST1H2BHQ93079 126 aa3.77□□□□□ -1.81
SMARCE1-217ENST00000580654 HIST1H2BNQ99877 126 aa3.77□□□□□ -1.81
SMARCE1-217ENST00000580654 HIST1H2BMQ99879 126 aa3.77□□□□□ -1.81
SMARCE1-217ENST00000580654 MIEN1Q9BRT3 115 aa3.77□□□□□ -1.81
SMARCE1-217ENST00000580654 A0A0G2JQZ4 141 aa3.76□□□□□ -1.81
SMARCE1-217ENST00000580654 C11orf86A6NJI1 115 aa3.76□□□□□ -1.81
SMARCE1-217ENST00000580654 FABP2P12104 132 aa3.76□□□□□ -1.81
SMARCE1-217ENST00000580654 KRTAP5-4Q6L8H1 288 aa3.76□□□□□ -1.81
SMARCE1-217ENST00000580654 DHRS4-AS1Q9P1J3 65 aa3.76□□□□□ -1.81
SMARCE1-217ENST00000580654 TMEM258P61165 79 aa3.75□□□□□ -1.81
SMARCE1-217ENST00000580654 PYY3Q5JQD4 70 aa3.75□□□□□ -1.81
SMARCE1-217ENST00000580654 MIR7-3HGQ8N6C7 128 aa3.75□□□□□ -1.81
SMARCE1-217ENST00000580654 Q8N9P0 234 aaPredicted RBP3.75□□□□□ -1.81
SMARCE1-217ENST00000580654 BRK1Q8WUW1 75 aa3.75□□□□□ -1.81
SMARCE1-217ENST00000580654 TRBV20-1A0A075B6N2 111 aa3.74□□□□□ -1.81
SMARCE1-217ENST00000580654 A0A0J9YXY3 114 aa3.74□□□□□ -1.81
SMARCE1-217ENST00000580654 KRTAP16-1A8MUX0 517 aa3.74□□□□□ -1.81
SMARCE1-217ENST00000580654 H3BMG7 143 aa3.74□□□□□ -1.81
SMARCE1-217ENST00000580654 CXCL6P80162 114 aa3.74□□□□□ -1.81
SMARCE1-217ENST00000580654 PMCHL1Q16048 86 aa3.74□□□□□ -1.81
SMARCE1-217ENST00000580654 CAMK2N1Q7Z7J9 78 aa3.74□□□□□ -1.81
SMARCE1-217ENST00000580654 COPS9Q8WXC6 57 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms