RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 LRP1BQ9NZR2 4599 aa9.12□□□□□ -0.95
CDK5RAP3-218ENST00000580391 DYNC1H1Q14204 4646 aaKnown RBP9.11□□□□□ -0.95
CDK5RAP3-218ENST00000580391 SCXQ7RTU7 201 aa9.11□□□□□ -0.95
CDK5RAP3-218ENST00000580391 LINC00846Q9NV44 126 aa9.11□□□□□ -0.95
CDK5RAP3-218ENST00000580391 SMIM29Q86T20 159 aa9.1□□□□□ -0.95
CDK5RAP3-218ENST00000580391 C1orf137Q5JT78 98 aa9.1□□□□□ -0.95
CDK5RAP3-218ENST00000580391 LINC00336Q6ZUF6 198 aa9.09□□□□□ -0.95
CDK5RAP3-218ENST00000580391 PDE6GP18545 87 aa9.08□□□□□ -0.96
CDK5RAP3-218ENST00000580391 SS18L2Q9UHA2 77 aa9.06□□□□□ -0.96
CDK5RAP3-218ENST00000580391 SPRR1BP22528 89 aa9.04□□□□□ -0.96
CDK5RAP3-218ENST00000580391 A0A1B0GVY2 172 aa9.03□□□□□ -0.96
CDK5RAP3-218ENST00000580391 LINC00643Q86TS7 51 aa9.03□□□□□ -0.96
CDK5RAP3-218ENST00000580391 F8WEM9 126 aa9.03□□□□□ -0.96
CDK5RAP3-218ENST00000580391 ZNF861PO60384 105 aa9.02□□□□□ -0.97
CDK5RAP3-218ENST00000580391 RYR3Q15413 4870 aa9.02□□□□□ -0.97
CDK5RAP3-218ENST00000580391 IGLV7-43P04211 117 aa9.01□□□□□ -0.97
CDK5RAP3-218ENST00000580391 A0A0G2JQZ4 141 aa9□□□□□ -0.97
CDK5RAP3-218ENST00000580391 A0A1W2PNM2 257 aa9□□□□□ -0.97
CDK5RAP3-218ENST00000580391 APOBP04114 4563 aaKnown RBP9□□□□□ -0.97
CDK5RAP3-218ENST00000580391 SPRR4Q96PI1 79 aa9□□□□□ -0.97
CDK5RAP3-218ENST00000580391 IGLV8-61A0A075B6I0 122 aa8.98□□□□□ -0.97
CDK5RAP3-218ENST00000580391 IGFL1Q6UW32 110 aa8.98□□□□□ -0.97
CDK5RAP3-218ENST00000580391 UBL5Q9BZL1 73 aa8.98□□□□□ -0.97
CDK5RAP3-218ENST00000580391 Q8NBF4 154 aa8.97□□□□□ -0.97
CDK5RAP3-218ENST00000580391 ANAPC13Q9BS18 74 aa8.97□□□□□ -0.97
CDK5RAP3-218ENST00000580391 VPS13BQ7Z7G8 4022 aa8.97□□□□□ -0.97
CDK5RAP3-218ENST00000580391 IGKV3D-7A0A0C4DH55 119 aa8.97□□□□□ -0.97
CDK5RAP3-218ENST00000580391 Q6JHZ5 121 aa8.97□□□□□ -0.97
CDK5RAP3-218ENST00000580391 Q6ZVQ6 151 aa8.97□□□□□ -0.97
CDK5RAP3-218ENST00000580391 TRBV7-7A0A0K0K1E9 115 aa8.96□□□□□ -0.98
CDK5RAP3-218ENST00000580391 LINC00483Q53H64 154 aa8.95□□□□□ -0.98
CDK5RAP3-218ENST00000580391 SMIM20Q8N5G0 67 aa8.95□□□□□ -0.98
CDK5RAP3-218ENST00000580391 ZNF706Q9Y5V0 76 aaPredicted RBP8.95□□□□□ -0.98
CDK5RAP3-218ENST00000580391 ANAPC11Q9NYG5 84 aa8.93□□□□□ -0.98
CDK5RAP3-218ENST00000580391 IGLV9-49A0A0B4J1Y8 123 aa8.92□□□□□ -0.98
CDK5RAP3-218ENST00000580391 Q6Q795 121 aa8.92□□□□□ -0.98
CDK5RAP3-218ENST00000580391 C9orf153Q5TBE3 101 aa8.9□□□□□ -0.99
CDK5RAP3-218ENST00000580391 ATP5EP2Q5VTU8 51 aa8.9□□□□□ -0.99
CDK5RAP3-218ENST00000580391 CRYGAP11844 174 aa8.89□□□□□ -0.99
CDK5RAP3-218ENST00000580391 C5orf47Q569G3 176 aa8.89□□□□□ -0.99
CDK5RAP3-218ENST00000580391 IMUPQ9GZP8 106 aa8.89□□□□□ -0.99
CDK5RAP3-218ENST00000580391 FAT1Q14517 4588 aa8.88□□□□□ -0.99
CDK5RAP3-218ENST00000580391 A0A1B0GW54 56 aa8.88□□□□□ -0.99
CDK5RAP3-218ENST00000580391 NREPQ16612 68 aa8.87□□□□□ -0.99
CDK5RAP3-218ENST00000580391 MOBPQ13875 183 aa8.86□□□□□ -0.99
CDK5RAP3-218ENST00000580391 A0A087WSZ3 146 aa8.85□□□□□ -0.99
CDK5RAP3-218ENST00000580391 A0A087WVE0 104 aa8.85□□□□□ -0.99
CDK5RAP3-218ENST00000580391 SMR3BP02814 79 aaPredicted RBP8.84□□□□□ -0.99
CDK5RAP3-218ENST00000580391 HIST1H4AP62805 103 aaKnown RBP8.84□□□□□ -0.99
CDK5RAP3-218ENST00000580391 FAM236AA0A1B0GUQ0 79 aa8.83□□□□□ -1
CDK5RAP3-218ENST00000580391 FAM236BA0A1B0GV22 79 aa8.83□□□□□ -1
CDK5RAP3-218ENST00000580391 RPL37AP61513 92 aaKnown RBP8.82□□□□□ -1
CDK5RAP3-218ENST00000580391 CXCL6P80162 114 aa8.82□□□□□ -1
CDK5RAP3-218ENST00000580391 BPY2O14599 106 aa8.79□□□□□ -1
CDK5RAP3-218ENST00000580391 HRCT1Q6UXD1 115 aa8.79□□□□□ -1
CDK5RAP3-218ENST00000580391 A0A087X002 238 aa8.78□□□□□ -1
CDK5RAP3-218ENST00000580391 Q8N9L7 120 aa8.78□□□□□ -1
CDK5RAP3-218ENST00000580391 KRTAP1-4P0C5Y4 121 aa8.77□□□□□ -1
CDK5RAP3-218ENST00000580391 CCDC179H3BU77 68 aa8.75□□□□□ -1.01
CDK5RAP3-218ENST00000580391 KRTAP13-2Q52LG2 175 aa8.75□□□□□ -1.01
CDK5RAP3-218ENST00000580391 DEFB116Q30KQ4 102 aa8.75□□□□□ -1.01
CDK5RAP3-218ENST00000580391 IGKV4-1P06312 121 aa8.74□□□□□ -1.01
CDK5RAP3-218ENST00000580391 HSPG2P98160 4391 aa8.74□□□□□ -1.01
CDK5RAP3-218ENST00000580391 KRTAP10-4P60372 401 aaPredicted RBP8.73□□□□□ -1.01
CDK5RAP3-218ENST00000580391 DSCR10P59022 87 aa8.73□□□□□ -1.01
CDK5RAP3-218ENST00000580391 FAM229BQ4G0N7 80 aa8.73□□□□□ -1.01
CDK5RAP3-218ENST00000580391 RYR1P21817 5038 aa8.72□□□□□ -1.01
CDK5RAP3-218ENST00000580391 SPINK6Q6UWN8 80 aa8.72□□□□□ -1.01
CDK5RAP3-218ENST00000580391 K7EQZ3 153 aa8.7□□□□□ -1.02
CDK5RAP3-218ENST00000580391 SSBP3-AS1Q7Z2R9 100 aa8.7□□□□□ -1.02
CDK5RAP3-218ENST00000580391 LINC00472Q9H8W2 130 aa8.7□□□□□ -1.02
CDK5RAP3-218ENST00000580391 PKHD1L1Q86WI1 4243 aa8.69□□□□□ -1.02
CDK5RAP3-218ENST00000580391 EPPK1P58107 5090 aaKnown RBP8.69□□□□□ -1.02
CDK5RAP3-218ENST00000580391 PLA2G1BP04054 148 aaKnown RBP8.68□□□□□ -1.02
CDK5RAP3-218ENST00000580391 ATOX1O00244 68 aa8.67□□□□□ -1.02
CDK5RAP3-218ENST00000580391 Q96NJ1 140 aa8.67□□□□□ -1.02
CDK5RAP3-218ENST00000580391 CD164Q04900 197 aa8.64□□□□□ -1.03
CDK5RAP3-218ENST00000580391 KIAA1109Q2LD37 5005 aa8.64□□□□□ -1.03
CDK5RAP3-218ENST00000580391 CDK2AP2O75956 126 aa8.62□□□□□ -1.03
CDK5RAP3-218ENST00000580391 PRR26Q8N8Z3 221 aa8.62□□□□□ -1.03
CDK5RAP3-218ENST00000580391 J3KT08 172 aa8.61□□□□□ -1.03
CDK5RAP3-218ENST00000580391 TYMSOSQ8TAI1 123 aa8.61□□□□□ -1.03
CDK5RAP3-218ENST00000580391 A8MWP4 228 aa8.6□□□□□ -1.03
CDK5RAP3-218ENST00000580391 FAM229AH3BQW9 127 aa8.58□□□□□ -1.04
CDK5RAP3-218ENST00000580391 UQCRQO14949 82 aa8.58□□□□□ -1.04
CDK5RAP3-218ENST00000580391 Q5VSD8 79 aa8.58□□□□□ -1.04
CDK5RAP3-218ENST00000580391 PRR15Q8IV56 129 aa8.58□□□□□ -1.04
CDK5RAP3-218ENST00000580391 HCG22E2RYF7 251 aa8.56□□□□□ -1.04
CDK5RAP3-218ENST00000580391 RPS28P62857 69 aaKnown RBP8.56□□□□□ -1.04
CDK5RAP3-218ENST00000580391 SERP2Q8N6R1 65 aa8.56□□□□□ -1.04
CDK5RAP3-218ENST00000580391 WFDC13Q8IUB5 93 aa8.55□□□□□ -1.04
CDK5RAP3-218ENST00000580391 KRTAP17-1Q9BYP8 105 aa8.55□□□□□ -1.04
CDK5RAP3-218ENST00000580391 COX7CP15954 63 aa8.54□□□□□ -1.04
CDK5RAP3-218ENST00000580391 ASB16-AS1Q495Z4 193 aa8.53□□□□□ -1.04
CDK5RAP3-218ENST00000580391 LRP1Q07954 4544 aaKnown RBP8.53□□□□□ -1.04
CDK5RAP3-218ENST00000580391 NDUFB1O75438 58 aa8.52□□□□□ -1.05
CDK5RAP3-218ENST00000580391 Q5XG85 94 aa8.52□□□□□ -1.05
CDK5RAP3-218ENST00000580391 LINC00304Q8N9R0 145 aa8.52□□□□□ -1.05
CDK5RAP3-218ENST00000580391 TRAV7A0A075B6U4 112 aa8.51□□□□□ -1.05
CDK5RAP3-218ENST00000580391 MMP24-AS1A0A0U1RRL7 71 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms