RNA–Protein interactions for RNA: ENST00000579944.1

LINC00271-206, long intergenic non-protein coding RNA 271, humanhuman

TSL 2

Gene LINC00271, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-206ENST00000579944 C8orf59Q8N0T1 100 aaPredicted RBP1.18□□□□□ -2.22
LINC00271-206ENST00000579944 TMEM229BQ8NBD8 167 aa1.18□□□□□ -2.22
LINC00271-206ENST00000579944 IMUPQ9GZP8 106 aa1.18□□□□□ -2.22
LINC00271-206ENST00000579944 FXYD6-FXYD2A0A087WZ82 144 aa1.17□□□□□ -2.22
LINC00271-206ENST00000579944 TRAV12-1A0A0B4J245 112 aa1.17□□□□□ -2.22
LINC00271-206ENST00000579944 CXCL1P09341 107 aa1.17□□□□□ -2.22
LINC00271-206ENST00000579944 MT1XP80297 61 aa1.17□□□□□ -2.22
LINC00271-206ENST00000579944 KRTAP20-2Q3LI61 65 aa1.17□□□□□ -2.22
LINC00271-206ENST00000579944 ATP11AUNQ6ZP68 121 aa1.17□□□□□ -2.22
LINC00271-206ENST00000579944 C5orf17Q8NAS9 161 aa1.17□□□□□ -2.22
LINC00271-206ENST00000579944 AP3S1Q92572 193 aa1.17□□□□□ -2.22
LINC00271-206ENST00000579944 CCDC32Q9BV29 185 aa1.17□□□□□ -2.22
LINC00271-206ENST00000579944 TRAV13-1A0A0B4J241 112 aa1.16□□□□□ -2.22
LINC00271-206ENST00000579944 MGPP08493 103 aa1.16□□□□□ -2.22
LINC00271-206ENST00000579944 VBP1P61758 197 aa1.16□□□□□ -2.22
LINC00271-206ENST00000579944 FAM74A1Q5RGS3 127 aa1.16□□□□□ -2.22
LINC00271-206ENST00000579944 Q6ZUT4 128 aa1.16□□□□□ -2.22
LINC00271-206ENST00000579944 AP1S3Q96PC3 154 aa1.16□□□□□ -2.22
LINC00271-206ENST00000579944 LIMD2Q9BT23 127 aa1.16□□□□□ -2.22
LINC00271-206ENST00000579944 C14orf132Q9NPU4 83 aa1.16□□□□□ -2.22
LINC00271-206ENST00000579944 LOC107984156A0A0G2JMH3 177 aa1.15□□□□□ -2.23
LINC00271-206ENST00000579944 C9orf170A2RU37 121 aa1.15□□□□□ -2.23
LINC00271-206ENST00000579944 TAX1BP3O14907 124 aa1.15□□□□□ -2.23
LINC00271-206ENST00000579944 ERC2-IT1O76042 136 aa1.15□□□□□ -2.23
LINC00271-206ENST00000579944 NDUFC2O95298 119 aa1.15□□□□□ -2.23
LINC00271-206ENST00000579944 SFT2D2O95562 160 aa1.15□□□□□ -2.23
LINC00271-206ENST00000579944 TMEM128Q5BJH2 165 aa1.15□□□□□ -2.23
LINC00271-206ENST00000579944 Q5XG85 94 aa1.15□□□□□ -2.23
LINC00271-206ENST00000579944 TEX261Q6UWH6 196 aa1.15□□□□□ -2.23
LINC00271-206ENST00000579944 ARL17AQ8IVW1 177 aa1.15□□□□□ -2.23
LINC00271-206ENST00000579944 RPL39LQ96EH5 51 aaKnown RBP1.15□□□□□ -2.23
LINC00271-206ENST00000579944 GSKIPQ9P0R6 139 aa1.15□□□□□ -2.23
LINC00271-206ENST00000579944 PIGBOS1A0A0B4J2F0 54 aa1.14□□□□□ -2.23
LINC00271-206ENST00000579944 CCDC160A6NGH7 325 aa1.14□□□□□ -2.23
LINC00271-206ENST00000579944 TIMM17BO60830 172 aa1.14□□□□□ -2.23
LINC00271-206ENST00000579944 IGLC6P0CF74 106 aa1.14□□□□□ -2.23
LINC00271-206ENST00000579944 S100A1P23297 94 aa1.14□□□□□ -2.23
LINC00271-206ENST00000579944 SPRR1AP35321 89 aa1.14□□□□□ -2.23
LINC00271-206ENST00000579944 NCS1P62166 190 aa1.14□□□□□ -2.23
LINC00271-206ENST00000579944 RBM3P98179 157 aaKnown RBP1.14□□□□□ -2.23
LINC00271-206ENST00000579944 SPANXN1Q5VSR9 72 aa1.14□□□□□ -2.23
LINC00271-206ENST00000579944 HRCT1Q6UXD1 115 aa1.14□□□□□ -2.23
LINC00271-206ENST00000579944 SOSTDC1Q6X4U4 206 aa1.14□□□□□ -2.23
LINC00271-206ENST00000579944 PRRT1Q99946 306 aa1.14□□□□□ -2.23
LINC00271-206ENST00000579944 TMEM242Q9NWH2 141 aa1.14□□□□□ -2.23
LINC00271-206ENST00000579944 LOC110117498A0A087WWA1 95 aa1.13□□□□□ -2.23
LINC00271-206ENST00000579944 AKAIN1P0CW23 69 aa1.13□□□□□ -2.23
LINC00271-206ENST00000579944 S100A12P80511 92 aa1.13□□□□□ -2.23
LINC00271-206ENST00000579944 SSBP1Q04837 148 aaKnown RBP1.13□□□□□ -2.23
LINC00271-206ENST00000579944 STX12Q86Y82 276 aa1.13□□□□□ -2.23
LINC00271-206ENST00000579944 TMEM254Q8TBM7 123 aa1.13□□□□□ -2.23
LINC00271-206ENST00000579944 TPRKBQ9Y3C4 175 aa1.13□□□□□ -2.23
LINC00271-206ENST00000579944 C7orf77A4D0Y5 90 aa1.12□□□□□ -2.23
LINC00271-206ENST00000579944 I3L3M4 83 aa1.12□□□□□ -2.23
LINC00271-206ENST00000579944 S100A11P31949 105 aa1.12□□□□□ -2.23
LINC00271-206ENST00000579944 C9orf153Q5TBE3 101 aa1.12□□□□□ -2.23
LINC00271-206ENST00000579944 SMIM4Q8WVI0 70 aa1.12□□□□□ -2.23
LINC00271-206ENST00000579944 BATF3Q9NR55 127 aa1.12□□□□□ -2.23
LINC00271-206ENST00000579944 ZFP30Q9Y2G7 519 aa1.12□□□□□ -2.23
LINC00271-206ENST00000579944 LOC105371267A0A1B0GV96 52 aa1.11□□□□□ -2.23
LINC00271-206ENST00000579944 SMIM31A0A1B0GVY4 71 aa1.11□□□□□ -2.23
LINC00271-206ENST00000579944 POLR2KP53803 58 aaKnown RBP1.11□□□□□ -2.23
LINC00271-206ENST00000579944 AKR1C8PQ5T2L2 129 aa1.11□□□□□ -2.23
LINC00271-206ENST00000579944 AKAP14Q86UN6 197 aa1.11□□□□□ -2.23
LINC00271-206ENST00000579944 Q8IZM0 81 aa1.11□□□□□ -2.23
LINC00271-206ENST00000579944 CDC42SE1Q9NRR8 79 aa1.11□□□□□ -2.23
LINC00271-206ENST00000579944 TRBV27A0A0K0K1C4 114 aa1.1□□□□□ -2.23
LINC00271-206ENST00000579944 F8VRH5 84 aa1.1□□□□□ -2.23
LINC00271-206ENST00000579944 TMEM256-PLSCR3K7ERE1 68 aa1.1□□□□□ -2.23
LINC00271-206ENST00000579944 IFNA1P01562 189 aa1.1□□□□□ -2.23
LINC00271-206ENST00000579944 GCHFRP30047 84 aa1.1□□□□□ -2.23
LINC00271-206ENST00000579944 KRTAP19-3Q7Z4W3 81 aa1.1□□□□□ -2.23
LINC00271-206ENST00000579944 CNFNQ9BYD5 112 aa1.1□□□□□ -2.23
LINC00271-206ENST00000579944 SCP2D1Q9UJQ7 156 aa1.1□□□□□ -2.23
LINC00271-206ENST00000579944 A0A1W2PRE2 83 aa1.09□□□□□ -2.23
LINC00271-206ENST00000579944 GNGT1P63211 74 aa1.09□□□□□ -2.23
LINC00271-206ENST00000579944 OR13C6PQ8NH95 151 aa1.09□□□□□ -2.23
LINC00271-206ENST00000579944 INE1O15225 51 aa1.08□□□□□ -2.24
LINC00271-206ENST00000579944 CKS1BP61024 79 aa1.08□□□□□ -2.24
LINC00271-206ENST00000579944 RPL39P62891 51 aaKnown RBP1.08□□□□□ -2.24
LINC00271-206ENST00000579944 MRPS36P82909 103 aaKnown RBP1.08□□□□□ -2.24
LINC00271-206ENST00000579944 ALKAL2Q6UX46 152 aa1.08□□□□□ -2.24
LINC00271-206ENST00000579944 TOMM7Q9P0U1 55 aa1.08□□□□□ -2.24
LINC00271-206ENST00000579944 SS18L2Q9UHA2 77 aa1.08□□□□□ -2.24
LINC00271-206ENST00000579944 FAM25AB3EWG3 89 aa1.07□□□□□ -2.24
LINC00271-206ENST00000579944 FAM25CB3EWG5 89 aa1.07□□□□□ -2.24
LINC00271-206ENST00000579944 FAM25GB3EWG6 89 aa1.07□□□□□ -2.24
LINC00271-206ENST00000579944 C17orf112F2Z3M2 114 aa1.07□□□□□ -2.24
LINC00271-206ENST00000579944 SPRR1BP22528 89 aa1.07□□□□□ -2.24
LINC00271-206ENST00000579944 MRPS10P82664 201 aaKnown RBP1.07□□□□□ -2.24
LINC00271-206ENST00000579944 KCNQ1DNQ9H478 68 aa1.07□□□□□ -2.24
LINC00271-206ENST00000579944 SYNE1Q8NF91 8797 aaKnown RBP1.06□□□□□ -2.24
LINC00271-206ENST00000579944 PFDN1O60925 122 aa1.06□□□□□ -2.24
LINC00271-206ENST00000579944 DNAL4O96015 105 aa1.06□□□□□ -2.24
LINC00271-206ENST00000579944 LSM3P62310 102 aaKnown RBP1.06□□□□□ -2.24
LINC00271-206ENST00000579944 HBBP68871 147 aa1.06□□□□□ -2.24
LINC00271-206ENST00000579944 KRTAP19-7Q3SYF9 63 aa1.06□□□□□ -2.24
LINC00271-206ENST00000579944 Q96NJ1 140 aa1.06□□□□□ -2.24
LINC00271-206ENST00000579944 SIX6O95475 246 aa1.05□□□□□ -2.24
LINC00271-206ENST00000579944 MT1EP04732 61 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms