RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 LAMTOR3Q9UHA4 124 aa5.1□□□□□ -1.59
CDK5RAP3-211ENST00000578996 TAX1BP3O14907 124 aa5.09□□□□□ -1.59
CDK5RAP3-211ENST00000578996 FXYD2P54710 66 aa5.09□□□□□ -1.59
CDK5RAP3-211ENST00000578996 ELOF1P60002 83 aaKnown RBP5.09□□□□□ -1.59
CDK5RAP3-211ENST00000578996 Q1RN00 199 aa5.09□□□□□ -1.59
CDK5RAP3-211ENST00000578996 COPS9Q8WXC6 57 aa5.09□□□□□ -1.59
CDK5RAP3-211ENST00000578996 C9orf92A6NGG3 77 aa5.08□□□□□ -1.6
CDK5RAP3-211ENST00000578996 SPRR1BP22528 89 aa5.08□□□□□ -1.6
CDK5RAP3-211ENST00000578996 A0A1B0GV90 55 aa5.07□□□□□ -1.6
CDK5RAP3-211ENST00000578996 C9orf118A6NHY6 69 aa5.07□□□□□ -1.6
CDK5RAP3-211ENST00000578996 H7C2G1 150 aa5.07□□□□□ -1.6
CDK5RAP3-211ENST00000578996 A0A0B4J2C4 111 aa5.06□□□□□ -1.6
CDK5RAP3-211ENST00000578996 TEX49A0A1B0GTD5 131 aa5.05□□□□□ -1.6
CDK5RAP3-211ENST00000578996 MUSTN1Q8IVN3 82 aa5.05□□□□□ -1.6
CDK5RAP3-211ENST00000578996 NHP2Q9NX24 153 aaKnown RBP5.05□□□□□ -1.6
CDK5RAP3-211ENST00000578996 KRTAP9-6A0A140TA67 174 aa5.04□□□□□ -1.6
CDK5RAP3-211ENST00000578996 CFC1BP0CG36 223 aa5.04□□□□□ -1.6
CDK5RAP3-211ENST00000578996 CFC1P0CG37 223 aa5.04□□□□□ -1.6
CDK5RAP3-211ENST00000578996 PCOTHQ58A44 107 aa5.04□□□□□ -1.6
CDK5RAP3-211ENST00000578996 IGLV8-61A0A075B6I0 122 aa5.03□□□□□ -1.6
CDK5RAP3-211ENST00000578996 A4D1N5 150 aa5.03□□□□□ -1.6
CDK5RAP3-211ENST00000578996 PRO1854Q9UHT4 67 aa5.03□□□□□ -1.6
CDK5RAP3-211ENST00000578996 A0A0G2JQZ4 141 aa5.02□□□□□ -1.61
CDK5RAP3-211ENST00000578996 TRBV7-6A0A0J9YX20 115 aa5.02□□□□□ -1.61
CDK5RAP3-211ENST00000578996 A0A1W2PPM0 123 aa5.02□□□□□ -1.61
CDK5RAP3-211ENST00000578996 CD164Q04900 197 aa5.02□□□□□ -1.61
CDK5RAP3-211ENST00000578996 H3BUT2 72 aa5.01□□□□□ -1.61
CDK5RAP3-211ENST00000578996 FABP2P12104 132 aa5.01□□□□□ -1.61
CDK5RAP3-211ENST00000578996 UBE2V1Q13404 147 aa5.01□□□□□ -1.61
CDK5RAP3-211ENST00000578996 LYRM7Q5U5X0 104 aa5.01□□□□□ -1.61
CDK5RAP3-211ENST00000578996 SMIM29Q86T20 159 aa5.01□□□□□ -1.61
CDK5RAP3-211ENST00000578996 TRAV13-2A0A0B4J235 113 aa5□□□□□ -1.61
CDK5RAP3-211ENST00000578996 K7ERJ3 54 aa5□□□□□ -1.61
CDK5RAP3-211ENST00000578996 VAMP3Q15836 100 aa5□□□□□ -1.61
CDK5RAP3-211ENST00000578996 GTF2H5Q6ZYL4 71 aa5□□□□□ -1.61
CDK5RAP3-211ENST00000578996 SMIM11BQ8TCY0 68 aa5□□□□□ -1.61
CDK5RAP3-211ENST00000578996 RAB37Q96AX2 223 aa5□□□□□ -1.61
CDK5RAP3-211ENST00000578996 IGLV5-48A0A075B6I7 105 aa4.99□□□□□ -1.61
CDK5RAP3-211ENST00000578996 TRBV20-1A0A075B6N2 111 aa4.98□□□□□ -1.61
CDK5RAP3-211ENST00000578996 F8WEM9 126 aa4.98□□□□□ -1.61
CDK5RAP3-211ENST00000578996 K7EP34 96 aa4.98□□□□□ -1.61
CDK5RAP3-211ENST00000578996 C1orf195Q5TG92 126 aa4.98□□□□□ -1.61
CDK5RAP3-211ENST00000578996 LCE2CQ5TA81 110 aa4.97□□□□□ -1.61
CDK5RAP3-211ENST00000578996 SPCS1Q9Y6A9 102 aa4.97□□□□□ -1.61
CDK5RAP3-211ENST00000578996 TCL1BO95988 128 aa4.96□□□□□ -1.62
CDK5RAP3-211ENST00000578996 Q5XG85 94 aa4.96□□□□□ -1.62
CDK5RAP3-211ENST00000578996 COX6CP09669 75 aa4.95□□□□□ -1.62
CDK5RAP3-211ENST00000578996 RPL37P61927 97 aaKnown RBP4.94□□□□□ -1.62
CDK5RAP3-211ENST00000578996 MT1HP80294 61 aa4.94□□□□□ -1.62
CDK5RAP3-211ENST00000578996 KRTAP19-2Q3LHN2 52 aa4.94□□□□□ -1.62
CDK5RAP3-211ENST00000578996 Q6ZQY7 126 aa4.94□□□□□ -1.62
CDK5RAP3-211ENST00000578996 NAA38Q9BRA0 125 aaKnown RBP4.94□□□□□ -1.62
CDK5RAP3-211ENST00000578996 hADV29S1A0JD25 119 aa4.93□□□□□ -1.62
CDK5RAP3-211ENST00000578996 F8W1H4 67 aa4.93□□□□□ -1.62
CDK5RAP3-211ENST00000578996 TRIAP1O43715 76 aa4.93□□□□□ -1.62
CDK5RAP3-211ENST00000578996 LINC00575Q6W349 94 aa4.93□□□□□ -1.62
CDK5RAP3-211ENST00000578996 PSMB2P49721 201 aa4.92□□□□□ -1.62
CDK5RAP3-211ENST00000578996 COX6B2Q6YFQ2 88 aa4.92□□□□□ -1.62
CDK5RAP3-211ENST00000578996 M0R2T5 61 aa4.91□□□□□ -1.62
CDK5RAP3-211ENST00000578996 SCGB1C2P0DMR2 95 aa4.91□□□□□ -1.62
CDK5RAP3-211ENST00000578996 ATXN8Q156A1 80 aa4.91□□□□□ -1.62
CDK5RAP3-211ENST00000578996 CLEC2BQ92478 149 aa4.91□□□□□ -1.62
CDK5RAP3-211ENST00000578996 FSIP2Q5CZC0 6907 aa4.91□□□□□ -1.62
CDK5RAP3-211ENST00000578996 H0YGX0 51 aa4.9□□□□□ -1.63
CDK5RAP3-211ENST00000578996 H3BMG7 143 aa4.9□□□□□ -1.63
CDK5RAP3-211ENST00000578996 Q6JHZ5 121 aa4.9□□□□□ -1.63
CDK5RAP3-211ENST00000578996 IGFL1Q6UW32 110 aa4.9□□□□□ -1.63
CDK5RAP3-211ENST00000578996 PRO0461Q9UI25 63 aa4.9□□□□□ -1.63
CDK5RAP3-211ENST00000578996 TRBV7-7A0A0K0K1E9 115 aa4.89□□□□□ -1.63
CDK5RAP3-211ENST00000578996 A0A1B0GX51 115 aa4.89□□□□□ -1.63
CDK5RAP3-211ENST00000578996 LST1O00453 97 aa4.89□□□□□ -1.63
CDK5RAP3-211ENST00000578996 TRACP01848 142 aa4.89□□□□□ -1.63
CDK5RAP3-211ENST00000578996 OCIAD2Q56VL3 154 aa4.88□□□□□ -1.63
CDK5RAP3-211ENST00000578996 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.88□□□□□ -1.63
CDK5RAP3-211ENST00000578996 OBSCN-AS1Q96MR7 158 aa4.88□□□□□ -1.63
CDK5RAP3-211ENST00000578996 CRCT1Q9UGL9 99 aa4.88□□□□□ -1.63
CDK5RAP3-211ENST00000578996 H3BT86 120 aa4.86□□□□□ -1.63
CDK5RAP3-211ENST00000578996 KRTAP10-6P60371 365 aaPredicted RBP4.86□□□□□ -1.63
CDK5RAP3-211ENST00000578996 Q6Q795 121 aa4.86□□□□□ -1.63
CDK5RAP3-211ENST00000578996 LORP23490 312 aaPredicted RBP4.85□□□□□ -1.63
CDK5RAP3-211ENST00000578996 SMCPP49901 116 aaPredicted RBP4.85□□□□□ -1.63
CDK5RAP3-211ENST00000578996 ATP11AUNQ6ZP68 121 aa4.85□□□□□ -1.63
CDK5RAP3-211ENST00000578996 PPDPFLQ8WWR9 84 aa4.85□□□□□ -1.63
CDK5RAP3-211ENST00000578996 C9JAW5 83 aa4.84□□□□□ -1.63
CDK5RAP3-211ENST00000578996 SNCGO76070 127 aa4.84□□□□□ -1.63
CDK5RAP3-211ENST00000578996 ANKRD29Q8N6D5 301 aa4.84□□□□□ -1.63
CDK5RAP3-211ENST00000578996 H3BQ85 93 aa4.83□□□□□ -1.64
CDK5RAP3-211ENST00000578996 K7ERU9 68 aa4.83□□□□□ -1.64
CDK5RAP3-211ENST00000578996 TEN1Q86WV5 123 aa4.83□□□□□ -1.64
CDK5RAP3-211ENST00000578996 Q96NJ1 140 aa4.83□□□□□ -1.64
CDK5RAP3-211ENST00000578996 Q75L30 129 aa4.82□□□□□ -1.64
CDK5RAP3-211ENST00000578996 FAM218AQ96MZ4 157 aa4.82□□□□□ -1.64
CDK5RAP3-211ENST00000578996 SS18L2Q9UHA2 77 aa4.82□□□□□ -1.64
CDK5RAP3-211ENST00000578996 J3QR89 54 aa4.81□□□□□ -1.64
CDK5RAP3-211ENST00000578996 ETDBQ3ZM63 59 aa4.81□□□□□ -1.64
CDK5RAP3-211ENST00000578996 FLGP20930 4061 aaPredicted RBP4.81□□□□□ -1.64
CDK5RAP3-211ENST00000578996 DNAL4O96015 105 aa4.8□□□□□ -1.64
CDK5RAP3-211ENST00000578996 GHRHP01286 108 aa4.8□□□□□ -1.64
CDK5RAP3-211ENST00000578996 A0A087WSZ3 146 aa4.79□□□□□ -1.64
CDK5RAP3-211ENST00000578996 NDUFV3P56181 108 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms