RNA–Protein interactions for RNA: ENST00000578887.1

RBFOX3-201, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 2

Gene RBFOX3, Length 2,694 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-201ENST00000578887 ETDCA0A1B0GVM5 59 aa8.89□□□□□ -0.99
RBFOX3-201ENST00000578887 ZCCHC13Q8WW36 166 aaKnown RBP8.88□□□□□ -0.99
RBFOX3-201ENST00000578887 DNAH1Q9P2D7 4330 aa8.88□□□□□ -0.99
RBFOX3-201ENST00000578887 LINC01556Q5JQF7 62 aa8.87□□□□□ -0.99
RBFOX3-201ENST00000578887 DHRS4-AS1Q9P1J3 65 aa8.87□□□□□ -0.99
RBFOX3-201ENST00000578887 SPRR1AP35321 89 aa8.86□□□□□ -0.99
RBFOX3-201ENST00000578887 UBE2BP63146 152 aa8.86□□□□□ -0.99
RBFOX3-201ENST00000578887 SPRR4Q96PI1 79 aa8.86□□□□□ -0.99
RBFOX3-201ENST00000578887 MGAM2Q2M2H8 2515 aa8.85□□□□□ -0.99
RBFOX3-201ENST00000578887 PSPHP1O15172 72 aa8.85□□□□□ -0.99
RBFOX3-201ENST00000578887 COL7A1Q02388 2944 aa8.84□□□□□ -0.99
RBFOX3-201ENST00000578887 DEFB131BA0A096LNP1 70 aa8.84□□□□□ -0.99
RBFOX3-201ENST00000578887 H3BNG1 76 aa8.84□□□□□ -0.99
RBFOX3-201ENST00000578887 WFDC13Q8IUB5 93 aa8.84□□□□□ -0.99
RBFOX3-201ENST00000578887 LINC00476Q8WZB0 136 aa8.84□□□□□ -0.99
RBFOX3-201ENST00000578887 RPL37AP61513 92 aaKnown RBP8.83□□□□□ -1
RBFOX3-201ENST00000578887 PSCAO43653 123 aa8.82□□□□□ -1
RBFOX3-201ENST00000578887 A8MU10 97 aa8.81□□□□□ -1
RBFOX3-201ENST00000578887 HCG22E2RYF7 251 aa8.81□□□□□ -1
RBFOX3-201ENST00000578887 TLX1NBP0CAT3 122 aa8.8□□□□□ -1
RBFOX3-201ENST00000578887 IGFL1Q6UW32 110 aa8.8□□□□□ -1
RBFOX3-201ENST00000578887 PRLHP81277 87 aa8.8□□□□□ -1
RBFOX3-201ENST00000578887 A0A087WSZ3 146 aa8.78□□□□□ -1
RBFOX3-201ENST00000578887 TENM2Q9NT68 2774 aa8.78□□□□□ -1
RBFOX3-201ENST00000578887 DNAH10OSP0CZ25 163 aa8.77□□□□□ -1
RBFOX3-201ENST00000578887 IGLV5-37A0A075B6J1 123 aa8.77□□□□□ -1.01
RBFOX3-201ENST00000578887 TRAV22A0A0B4J277 110 aa8.77□□□□□ -1.01
RBFOX3-201ENST00000578887 LINC00588Q9Y4M8 146 aa8.77□□□□□ -1.01
RBFOX3-201ENST00000578887 A0A1B0GW54 56 aa8.76□□□□□ -1.01
RBFOX3-201ENST00000578887 K7EIL1 84 aa8.76□□□□□ -1.01
RBFOX3-201ENST00000578887 Q1T7F1 81 aa8.76□□□□□ -1.01
RBFOX3-201ENST00000578887 REG3GQ6UW15 175 aa8.75□□□□□ -1.01
RBFOX3-201ENST00000578887 IGKV2-24A0A0C4DH68 120 aa8.74□□□□□ -1.01
RBFOX3-201ENST00000578887 A8MUN3 132 aa8.74□□□□□ -1.01
RBFOX3-201ENST00000578887 NDUFS5O43920 106 aa8.74□□□□□ -1.01
RBFOX3-201ENST00000578887 LINC00208Q96KT6 92 aa8.74□□□□□ -1.01
RBFOX3-201ENST00000578887 DNAH9Q9NYC9 4486 aa8.73□□□□□ -1.01
RBFOX3-201ENST00000578887 HUWE1Q7Z6Z7 4374 aaKnown RBP8.73□□□□□ -1.01
RBFOX3-201ENST00000578887 PRR15Q8IV56 129 aa8.73□□□□□ -1.01
RBFOX3-201ENST00000578887 FAM229AH3BQW9 127 aa8.72□□□□□ -1.01
RBFOX3-201ENST00000578887 KRTAP11-1Q8IUC1 163 aa8.72□□□□□ -1.01
RBFOX3-201ENST00000578887 STAB2Q8WWQ8 2551 aa8.71□□□□□ -1.02
RBFOX3-201ENST00000578887 CYP4F30PQ9H0H9 118 aa8.7□□□□□ -1.02
RBFOX3-201ENST00000578887 A0A096LNI7 61 aa8.7□□□□□ -1.02
RBFOX3-201ENST00000578887 KRTAP29-1A8MX34 341 aaPredicted RBP8.68□□□□□ -1.02
RBFOX3-201ENST00000578887 KTN1-AS1Q86SY8 53 aa8.67□□□□□ -1.02
RBFOX3-201ENST00000578887 CNBPP62633 177 aaKnown RBP8.66□□□□□ -1.02
RBFOX3-201ENST00000578887 H0Y9J4 135 aa8.65□□□□□ -1.02
RBFOX3-201ENST00000578887 CHTF8P0CG12 524 aa8.65□□□□□ -1.02
RBFOX3-201ENST00000578887 MP68P56378 58 aa8.65□□□□□ -1.02
RBFOX3-201ENST00000578887 B9D2Q9BPU9 175 aa8.65□□□□□ -1.02
RBFOX3-201ENST00000578887 DNHD1Q96M86 4753 aa8.65□□□□□ -1.03
RBFOX3-201ENST00000578887 H0Y9P7 68 aa8.65□□□□□ -1.03
RBFOX3-201ENST00000578887 KRTAP1-5Q9BYS1 174 aa8.65□□□□□ -1.03
RBFOX3-201ENST00000578887 Q5VV11 94 aa8.64□□□□□ -1.03
RBFOX3-201ENST00000578887 CASC2Q6XLA1 102 aa8.63□□□□□ -1.03
RBFOX3-201ENST00000578887 UBE2AP49459 152 aa8.63□□□□□ -1.03
RBFOX3-201ENST00000578887 DNAH7Q8WXX0 4024 aa8.63□□□□□ -1.03
RBFOX3-201ENST00000578887 PHF5AQ7RTV0 110 aaKnown RBP8.62□□□□□ -1.03
RBFOX3-201ENST00000578887 ZNF706Q9Y5V0 76 aaPredicted RBP8.62□□□□□ -1.03
RBFOX3-201ENST00000578887 IGLV8-61A0A075B6I0 122 aa8.61□□□□□ -1.03
RBFOX3-201ENST00000578887 NDUFB1O75438 58 aa8.6□□□□□ -1.03
RBFOX3-201ENST00000578887 LINC00313P59037 77 aa8.59□□□□□ -1.03
RBFOX3-201ENST00000578887 SEC61BP60468 96 aaKnown RBP8.59□□□□□ -1.03
RBFOX3-201ENST00000578887 Q8N9P0 234 aaPredicted RBP8.59□□□□□ -1.03
RBFOX3-201ENST00000578887 LINC00472Q9H8W2 130 aa8.58□□□□□ -1.04
RBFOX3-201ENST00000578887 C16orf90A8MZG2 172 aa8.57□□□□□ -1.04
RBFOX3-201ENST00000578887 A8MWP4 228 aa8.56□□□□□ -1.04
RBFOX3-201ENST00000578887 CHKB-CPT1BH3BT56 60 aa8.55□□□□□ -1.04
RBFOX3-201ENST00000578887 C9orf163Q8N9P6 203 aa8.55□□□□□ -1.04
RBFOX3-201ENST00000578887 PRR15LQ9BU68 103 aa8.55□□□□□ -1.04
RBFOX3-201ENST00000578887 PRKDCP78527 4128 aaKnown RBP8.55□□□□□ -1.04
RBFOX3-201ENST00000578887 PCOTHQ58A44 107 aa8.54□□□□□ -1.04
RBFOX3-201ENST00000578887 MMP24-AS1A0A0U1RRL7 71 aa8.53□□□□□ -1.04
RBFOX3-201ENST00000578887 PANO1I0J062 215 aa8.52□□□□□ -1.05
RBFOX3-201ENST00000578887 SPANXA2-OT1Q8N9U9 137 aa8.52□□□□□ -1.05
RBFOX3-201ENST00000578887 MEGF8Q7Z7M0 2845 aa8.52□□□□□ -1.05
RBFOX3-201ENST00000578887 LCA10Q71F78 164 aa8.5□□□□□ -1.05
RBFOX3-201ENST00000578887 COA5Q86WW8 74 aa8.5□□□□□ -1.05
RBFOX3-201ENST00000578887 FRAS1Q86XX4 4008 aa8.49□□□□□ -1.05
RBFOX3-201ENST00000578887 SPTSSBQ8NFR3 76 aa8.48□□□□□ -1.05
RBFOX3-201ENST00000578887 CDK2AP2O75956 126 aa8.47□□□□□ -1.05
RBFOX3-201ENST00000578887 SPRR1BP22528 89 aa8.47□□□□□ -1.05
RBFOX3-201ENST00000578887 IGLV9-49A0A0B4J1Y8 123 aa8.47□□□□□ -1.05
RBFOX3-201ENST00000578887 Q96NJ1 140 aa8.46□□□□□ -1.06
RBFOX3-201ENST00000578887 H3BPC8 53 aa8.45□□□□□ -1.06
RBFOX3-201ENST00000578887 LIMD2Q9BT23 127 aa8.45□□□□□ -1.06
RBFOX3-201ENST00000578887 DYNC2H1Q8NCM8 4307 aaKnown RBP8.44□□□□□ -1.06
RBFOX3-201ENST00000578887 PLECQ15149 4684 aaKnown RBP8.43□□□□□ -1.06
RBFOX3-201ENST00000578887 IGLV7-46A0A075B6I9 117 aa8.43□□□□□ -1.06
RBFOX3-201ENST00000578887 SPAG11AQ6PDA7 123 aa8.43□□□□□ -1.06
RBFOX3-201ENST00000578887 IGHV6-1A0A0B4J1U7 121 aa8.42□□□□□ -1.06
RBFOX3-201ENST00000578887 A0A087X002 238 aa8.42□□□□□ -1.06
RBFOX3-201ENST00000578887 NOTCH2NLQ7Z3S9 236 aa8.42□□□□□ -1.06
RBFOX3-201ENST00000578887 A6NED7 52 aa8.41□□□□□ -1.06
RBFOX3-201ENST00000578887 ANAPC11Q9NYG5 84 aa8.4□□□□□ -1.06
RBFOX3-201ENST00000578887 MOBPQ13875 183 aa8.4□□□□□ -1.07
RBFOX3-201ENST00000578887 KRTAP13-1Q8IUC0 172 aa8.39□□□□□ -1.07
RBFOX3-201ENST00000578887 DNAH8Q96JB1 4490 aa8.39□□□□□ -1.07
RBFOX3-201ENST00000578887 STARD9Q9P2P6 4700 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms