RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 HERVK_113P61574 105 aa5□□□□□ -1.61
GGA3-206ENST00000578773 LCE3BQ5TA77 95 aa5□□□□□ -1.61
GGA3-206ENST00000578773 CHCHD1Q96BP2 118 aaKnown RBP5□□□□□ -1.61
GGA3-206ENST00000578773 SPANXDQ9BXN6 97 aa5□□□□□ -1.61
GGA3-206ENST00000578773 PLNP26678 52 aa4.99□□□□□ -1.61
GGA3-206ENST00000578773 Q5VV11 94 aa4.98□□□□□ -1.61
GGA3-206ENST00000578773 LINC00518Q8N0U6 118 aa4.98□□□□□ -1.61
GGA3-206ENST00000578773 F8WEM9 126 aa4.97□□□□□ -1.61
GGA3-206ENST00000578773 HSBP1O75506 76 aa4.97□□□□□ -1.61
GGA3-206ENST00000578773 DPM2O94777 84 aa4.97□□□□□ -1.61
GGA3-206ENST00000578773 A0A1B0GWB2 263 aa4.96□□□□□ -1.62
GGA3-206ENST00000578773 LST1O00453 97 aa4.96□□□□□ -1.62
GGA3-206ENST00000578773 LITAFQ99732 161 aa4.96□□□□□ -1.62
GGA3-206ENST00000578773 DSTQ03001 7570 aaKnown RBP4.95□□□□□ -1.62
GGA3-206ENST00000578773 TRBV7-6A0A0J9YX20 115 aa4.95□□□□□ -1.62
GGA3-206ENST00000578773 IGKCP01834 107 aa4.95□□□□□ -1.62
GGA3-206ENST00000578773 KRTAP19-8Q3LI54 63 aa4.95□□□□□ -1.62
GGA3-206ENST00000578773 SERF1AO75920 110 aa4.94□□□□□ -1.62
GGA3-206ENST00000578773 LEPROTL1O95214 131 aa4.94□□□□□ -1.62
GGA3-206ENST00000578773 UQCC3Q6UW78 93 aa4.94□□□□□ -1.62
GGA3-206ENST00000578773 MTURNQ8N3F0 131 aa4.94□□□□□ -1.62
GGA3-206ENST00000578773 CLEC2BQ92478 149 aa4.94□□□□□ -1.62
GGA3-206ENST00000578773 KRTAP4-9Q9BYQ8 210 aa4.94□□□□□ -1.62
GGA3-206ENST00000578773 A0A1W2PNM2 257 aa4.92□□□□□ -1.62
GGA3-206ENST00000578773 A6NDN8 102 aa4.92□□□□□ -1.62
GGA3-206ENST00000578773 GHRHP01286 108 aa4.92□□□□□ -1.62
GGA3-206ENST00000578773 FABP4P15090 132 aa4.92□□□□□ -1.62
GGA3-206ENST00000578773 CLLU1Q5K131 121 aa4.92□□□□□ -1.62
GGA3-206ENST00000578773 SLC7A5P1Q8MH63 180 aa4.92□□□□□ -1.62
GGA3-206ENST00000578773 E9PLD3 99 aa4.91□□□□□ -1.62
GGA3-206ENST00000578773 Q6JHZ5 121 aa4.91□□□□□ -1.62
GGA3-206ENST00000578773 A4D1N5 150 aa4.89□□□□□ -1.63
GGA3-206ENST00000578773 TIMM17BO60830 172 aa4.89□□□□□ -1.63
GGA3-206ENST00000578773 OCIAD2Q56VL3 154 aa4.89□□□□□ -1.63
GGA3-206ENST00000578773 NHP2Q9NX24 153 aaKnown RBP4.89□□□□□ -1.63
GGA3-206ENST00000578773 TTTY13Q9BZ97 58 aa4.88□□□□□ -1.63
GGA3-206ENST00000578773 HSPB8Q9UJY1 196 aa4.88□□□□□ -1.63
GGA3-206ENST00000578773 AHNAK2Q8IVF2 5795 aa4.88□□□□□ -1.63
GGA3-206ENST00000578773 TRAV13-2A0A0B4J235 113 aa4.87□□□□□ -1.63
GGA3-206ENST00000578773 ZNF815PA8K554 130 aa4.87□□□□□ -1.63
GGA3-206ENST00000578773 COLCA2A8K830 154 aa4.87□□□□□ -1.63
GGA3-206ENST00000578773 SPINK7P58062 85 aa4.87□□□□□ -1.63
GGA3-206ENST00000578773 LINC00310P59036 64 aa4.86□□□□□ -1.63
GGA3-206ENST00000578773 Q6ZQY7 126 aa4.86□□□□□ -1.63
GGA3-206ENST00000578773 WFDC13Q8IUB5 93 aa4.86□□□□□ -1.63
GGA3-206ENST00000578773 SMIM11BQ8TCY0 68 aa4.86□□□□□ -1.63
GGA3-206ENST00000578773 H3BUT2 72 aa4.85□□□□□ -1.63
GGA3-206ENST00000578773 KRTAP8-1Q8IUC2 63 aa4.85□□□□□ -1.63
GGA3-206ENST00000578773 HMCN1Q96RW7 5635 aa4.83□□□□□ -1.64
GGA3-206ENST00000578773 LINC00313P59037 77 aa4.83□□□□□ -1.64
GGA3-206ENST00000578773 ANKRD39Q53RE8 183 aa4.83□□□□□ -1.64
GGA3-206ENST00000578773 LINC00575Q6W349 94 aa4.83□□□□□ -1.64
GGA3-206ENST00000578773 FAM218AQ96MZ4 157 aa4.83□□□□□ -1.64
GGA3-206ENST00000578773 SIGMAR1Q99720 223 aa4.83□□□□□ -1.64
GGA3-206ENST00000578773 SPRR2GQ9BYE4 73 aa4.83□□□□□ -1.64
GGA3-206ENST00000578773 hADV29S1A0JD25 119 aa4.82□□□□□ -1.64
GGA3-206ENST00000578773 SS18L2Q9UHA2 77 aa4.82□□□□□ -1.64
GGA3-206ENST00000578773 APOC3P02656 99 aa4.81□□□□□ -1.64
GGA3-206ENST00000578773 VAMP3Q15836 100 aa4.81□□□□□ -1.64
GGA3-206ENST00000578773 SCGB1D4Q6XE38 83 aa4.81□□□□□ -1.64
GGA3-206ENST00000578773 MUSTN1Q8IVN3 82 aa4.81□□□□□ -1.64
GGA3-206ENST00000578773 YPEL4Q96NS1 127 aa4.81□□□□□ -1.64
GGA3-206ENST00000578773 SNHG12Q9BXW3 62 aa4.81□□□□□ -1.64
GGA3-206ENST00000578773 TRGC2P03986 189 aa4.8□□□□□ -1.64
GGA3-206ENST00000578773 A0A087WSZ3 146 aa4.79□□□□□ -1.64
GGA3-206ENST00000578773 IMUPQ9GZP8 106 aa4.79□□□□□ -1.64
GGA3-206ENST00000578773 COPS9Q8WXC6 57 aa4.78□□□□□ -1.64
GGA3-206ENST00000578773 SYS1-DBNDD2H3BUS1 97 aa4.77□□□□□ -1.65
GGA3-206ENST00000578773 SNAPINO95295 136 aa4.77□□□□□ -1.65
GGA3-206ENST00000578773 IFITM1P13164 125 aa4.77□□□□□ -1.65
GGA3-206ENST00000578773 SMCPP49901 116 aaPredicted RBP4.76□□□□□ -1.65
GGA3-206ENST00000578773 ZCCHC13Q8WW36 166 aaKnown RBP4.76□□□□□ -1.65
GGA3-206ENST00000578773 FAM236AA0A1B0GUQ0 79 aa4.75□□□□□ -1.65
GGA3-206ENST00000578773 FAM236BA0A1B0GV22 79 aa4.75□□□□□ -1.65
GGA3-206ENST00000578773 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.75□□□□□ -1.65
GGA3-206ENST00000578773 TEN1Q86WV5 123 aa4.75□□□□□ -1.65
GGA3-206ENST00000578773 SVBPQ8N300 66 aa4.75□□□□□ -1.65
GGA3-206ENST00000578773 KRTAP4-8A0A0G2JLE6 195 aa4.74□□□□□ -1.65
GGA3-206ENST00000578773 SCGB1D1O95968 90 aa4.74□□□□□ -1.65
GGA3-206ENST00000578773 IGKV4-1P06312 121 aa4.74□□□□□ -1.65
GGA3-206ENST00000578773 H1FX-AS1Q4G0G2 97 aa4.74□□□□□ -1.65
GGA3-206ENST00000578773 KRTAP4-8Q9BYQ9 185 aa4.74□□□□□ -1.65
GGA3-206ENST00000578773 LINC01545Q5VT33 79 aa4.73□□□□□ -1.65
GGA3-206ENST00000578773 DEFB116Q30KQ4 102 aa4.72□□□□□ -1.65
GGA3-206ENST00000578773 KRTAP5-10Q6L8G5 202 aa4.72□□□□□ -1.65
GGA3-206ENST00000578773 PPDPFLQ8WWR9 84 aa4.72□□□□□ -1.65
GGA3-206ENST00000578773 NDUFA5Q16718 116 aa4.71□□□□□ -1.66
GGA3-206ENST00000578773 IGHV6-1A0A0B4J1U7 121 aa4.7□□□□□ -1.66
GGA3-206ENST00000578773 LCE1DQ5T752 114 aa4.69□□□□□ -1.66
GGA3-206ENST00000578773 PET117Q6UWS5 81 aa4.69□□□□□ -1.66
GGA3-206ENST00000578773 NDUFV3P56181 108 aaKnown RBP4.68□□□□□ -1.66
GGA3-206ENST00000578773 C12orf57Q99622 126 aa4.67□□□□□ -1.66
GGA3-206ENST00000578773 H3BMG7 143 aa4.66□□□□□ -1.66
GGA3-206ENST00000578773 ATOH7Q8N100 152 aa4.66□□□□□ -1.66
GGA3-206ENST00000578773 C3orf79P0CE67 100 aa4.65□□□□□ -1.67
GGA3-206ENST00000578773 MT1XP80297 61 aa4.65□□□□□ -1.67
GGA3-206ENST00000578773 C5orf47Q569G3 176 aa4.65□□□□□ -1.67
GGA3-206ENST00000578773 BVES-AS1Q5T3Y7 98 aa4.65□□□□□ -1.67
GGA3-206ENST00000578773 KRTDAPP60985 99 aa4.63□□□□□ -1.67
GGA3-206ENST00000578773 A0A1B0GV72 72 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms