RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 IGLV9-49A0A0B4J1Y8 123 aa7.2□□□□□ -1.26
IFT20-207ENST00000578547 TCL1BO95988 128 aa7.2□□□□□ -1.26
IFT20-207ENST00000578547 FABP2P12104 132 aa7.2□□□□□ -1.26
IFT20-207ENST00000578547 LINC01547P58512 204 aaPredicted RBP7.2□□□□□ -1.26
IFT20-207ENST00000578547 SPRR1BP22528 89 aa7.19□□□□□ -1.26
IFT20-207ENST00000578547 ATXN8Q156A1 80 aa7.19□□□□□ -1.26
IFT20-207ENST00000578547 Q8N377 158 aa7.19□□□□□ -1.26
IFT20-207ENST00000578547 C3orf22Q8N5N4 141 aa7.19□□□□□ -1.26
IFT20-207ENST00000578547 TRACP01848 142 aa7.18□□□□□ -1.26
IFT20-207ENST00000578547 KRTAP13-2Q52LG2 175 aa7.18□□□□□ -1.26
IFT20-207ENST00000578547 C9orf153Q5TBE3 101 aa7.18□□□□□ -1.26
IFT20-207ENST00000578547 TRBV20-1A0A075B6N2 111 aa7.17□□□□□ -1.26
IFT20-207ENST00000578547 MT1HL1P0DM35 61 aa7.17□□□□□ -1.26
IFT20-207ENST00000578547 KRTAP10-8P60410 259 aa7.17□□□□□ -1.26
IFT20-207ENST00000578547 MOBPQ13875 183 aa7.17□□□□□ -1.26
IFT20-207ENST00000578547 OCIAD2Q56VL3 154 aa7.17□□□□□ -1.26
IFT20-207ENST00000578547 TYMSOSQ8TAI1 123 aa7.17□□□□□ -1.26
IFT20-207ENST00000578547 ORMDL1Q9P0S3 153 aa7.17□□□□□ -1.26
IFT20-207ENST00000578547 LAMTOR3Q9UHA4 124 aa7.17□□□□□ -1.26
IFT20-207ENST00000578547 LCE2AQ5TA79 106 aaPredicted RBP7.16□□□□□ -1.26
IFT20-207ENST00000578547 SMIM29Q86T20 159 aa7.15□□□□□ -1.26
IFT20-207ENST00000578547 SPCS1Q9Y6A9 102 aa7.15□□□□□ -1.26
IFT20-207ENST00000578547 F8WEM9 126 aa7.14□□□□□ -1.27
IFT20-207ENST00000578547 GHRHP01286 108 aa7.14□□□□□ -1.27
IFT20-207ENST00000578547 PPDPFLQ8WWR9 84 aa7.14□□□□□ -1.27
IFT20-207ENST00000578547 DMBT1Q9UGM3 2413 aaPredicted RBP7.14□□□□□ -1.27
IFT20-207ENST00000578547 Q8NBF4 154 aa7.13□□□□□ -1.27
IFT20-207ENST00000578547 TNXBP22105 4242 aa7.12□□□□□ -1.27
IFT20-207ENST00000578547 C9JAW5 83 aa7.12□□□□□ -1.27
IFT20-207ENST00000578547 H3BMG7 143 aa7.12□□□□□ -1.27
IFT20-207ENST00000578547 A0A1B0GV72 72 aa7.11□□□□□ -1.27
IFT20-207ENST00000578547 BAALC-AS2P0C853 105 aa7.11□□□□□ -1.27
IFT20-207ENST00000578547 NDUFV3P56181 108 aaKnown RBP7.11□□□□□ -1.27
IFT20-207ENST00000578547 MTURNQ8N3F0 131 aa7.11□□□□□ -1.27
IFT20-207ENST00000578547 H3BQ85 93 aa7.1□□□□□ -1.27
IFT20-207ENST00000578547 K7EP34 96 aa7.1□□□□□ -1.27
IFT20-207ENST00000578547 TMEM256-PLSCR3K7ERE1 68 aa7.1□□□□□ -1.27
IFT20-207ENST00000578547 LCE2CQ5TA81 110 aa7.09□□□□□ -1.27
IFT20-207ENST00000578547 A0A0G2JQZ4 141 aa7.08□□□□□ -1.28
IFT20-207ENST00000578547 SSBP3-AS1Q7Z2R9 100 aa7.08□□□□□ -1.28
IFT20-207ENST00000578547 LINC00304Q8N9R0 145 aa7.08□□□□□ -1.28
IFT20-207ENST00000578547 ANKRD29Q8N6D5 301 aa7.07□□□□□ -1.28
IFT20-207ENST00000578547 UBE2V1Q13404 147 aa7.06□□□□□ -1.28
IFT20-207ENST00000578547 HRCT1Q6UXD1 115 aa7.06□□□□□ -1.28
IFT20-207ENST00000578547 GTF2H5Q6ZYL4 71 aa7.06□□□□□ -1.28
IFT20-207ENST00000578547 HERC1Q15751 4861 aa7.05□□□□□ -1.28
IFT20-207ENST00000578547 IGLV8-61A0A075B6I0 122 aa7.04□□□□□ -1.28
IFT20-207ENST00000578547 Q6JHZ5 121 aa7.04□□□□□ -1.28
IFT20-207ENST00000578547 IGFL1Q6UW32 110 aa7.04□□□□□ -1.28
IFT20-207ENST00000578547 H3BT86 120 aa7.03□□□□□ -1.28
IFT20-207ENST00000578547 A0A1B0GV90 55 aa7.02□□□□□ -1.29
IFT20-207ENST00000578547 SPAG11AQ6PDA7 123 aa7.02□□□□□ -1.29
IFT20-207ENST00000578547 RBM3P98179 157 aaKnown RBP7□□□□□ -1.29
IFT20-207ENST00000578547 SPINK1P00995 79 aa6.99□□□□□ -1.29
IFT20-207ENST00000578547 DSCR8Q96T75 97 aa6.99□□□□□ -1.29
IFT20-207ENST00000578547 PRO0461Q9UI25 63 aa6.99□□□□□ -1.29
IFT20-207ENST00000578547 JMJD7-PLA2G4BH0Y9G9 81 aa6.98□□□□□ -1.29
IFT20-207ENST00000578547 CD164Q04900 197 aa6.97□□□□□ -1.29
IFT20-207ENST00000578547 VPS25Q9BRG1 176 aa6.97□□□□□ -1.29
IFT20-207ENST00000578547 C14orf132Q9NPU4 83 aa6.97□□□□□ -1.29
IFT20-207ENST00000578547 TRBV7-4A0A0J9YYF1 115 aa6.95□□□□□ -1.3
IFT20-207ENST00000578547 A0A1W2PNM2 257 aa6.95□□□□□ -1.3
IFT20-207ENST00000578547 CCKP06307 115 aa6.95□□□□□ -1.3
IFT20-207ENST00000578547 RETNLBQ9BQ08 111 aa6.95□□□□□ -1.3
IFT20-207ENST00000578547 LIMD2Q9BT23 127 aa6.95□□□□□ -1.3
IFT20-207ENST00000578547 TRBV7-7A0A0K0K1E9 115 aa6.94□□□□□ -1.3
IFT20-207ENST00000578547 F8W1H4 67 aa6.94□□□□□ -1.3
IFT20-207ENST00000578547 TEN1Q86WV5 123 aa6.94□□□□□ -1.3
IFT20-207ENST00000578547 OBSCN-AS1Q96MR7 158 aa6.94□□□□□ -1.3
IFT20-207ENST00000578547 LORP23490 312 aaPredicted RBP6.93□□□□□ -1.3
IFT20-207ENST00000578547 RPS29P62273 56 aaKnown RBP6.93□□□□□ -1.3
IFT20-207ENST00000578547 LOC110117498A0A087WWA1 95 aa6.92□□□□□ -1.3
IFT20-207ENST00000578547 Q6Q795 121 aa6.92□□□□□ -1.3
IFT20-207ENST00000578547 Q6ZQT0 140 aa6.92□□□□□ -1.3
IFT20-207ENST00000578547 A0A087WSZ3 146 aa6.91□□□□□ -1.3
IFT20-207ENST00000578547 PDE6GP18545 87 aa6.9□□□□□ -1.3
IFT20-207ENST00000578547 ETDBQ3ZM63 59 aa6.9□□□□□ -1.3
IFT20-207ENST00000578547 HMCN2Q8NDA2 5059 aa6.9□□□□□ -1.31
IFT20-207ENST00000578547 PRR4Q16378 134 aa6.89□□□□□ -1.31
IFT20-207ENST00000578547 SS18L2Q9UHA2 77 aa6.88□□□□□ -1.31
IFT20-207ENST00000578547 Q5XG85 94 aa6.87□□□□□ -1.31
IFT20-207ENST00000578547 C21orf62-AS1Q17RA5 79 aa6.84□□□□□ -1.31
IFT20-207ENST00000578547 C1orf195Q5TG92 126 aa6.84□□□□□ -1.31
IFT20-207ENST00000578547 ASB16-AS1Q495Z4 193 aa6.83□□□□□ -1.32
IFT20-207ENST00000578547 IGLV7-46A0A075B6I9 117 aa6.82□□□□□ -1.32
IFT20-207ENST00000578547 FP248Q71RG6 208 aaPredicted RBP6.82□□□□□ -1.32
IFT20-207ENST00000578547 A0A1B0GW54 56 aa6.8□□□□□ -1.32
IFT20-207ENST00000578547 DEFB116Q30KQ4 102 aa6.79□□□□□ -1.32
IFT20-207ENST00000578547 Q96NJ1 140 aa6.79□□□□□ -1.32
IFT20-207ENST00000578547 SIGMAR1Q99720 223 aa6.79□□□□□ -1.32
IFT20-207ENST00000578547 IGKV4-1P06312 121 aa6.77□□□□□ -1.33
IFT20-207ENST00000578547 NREPQ16612 68 aa6.77□□□□□ -1.33
IFT20-207ENST00000578547 LINC00472Q9H8W2 130 aa6.76□□□□□ -1.33
IFT20-207ENST00000578547 LINC00846Q9NV44 126 aa6.74□□□□□ -1.33
IFT20-207ENST00000578547 C9orf92A6NGG3 77 aa6.73□□□□□ -1.33
IFT20-207ENST00000578547 Q6ZVQ6 151 aa6.73□□□□□ -1.33
IFT20-207ENST00000578547 LPAP08519 4548 aa6.72□□□□□ -1.33
IFT20-207ENST00000578547 J3KT08 172 aa6.72□□□□□ -1.33
IFT20-207ENST00000578547 LRP2P98164 4655 aa6.72□□□□□ -1.33
IFT20-207ENST00000578547 TPRXLQ17RH7 258 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms