RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 SCGB1C2P0DMR2 95 aa6.76□□□□□ -1.33
TRAPPC8-204ENST00000578252 ERC2-IT1O76042 136 aa6.74□□□□□ -1.33
TRAPPC8-204ENST00000578252 H3BUT2 72 aa6.73□□□□□ -1.33
TRAPPC8-204ENST00000578252 OCIAD2Q56VL3 154 aa6.73□□□□□ -1.33
TRAPPC8-204ENST00000578252 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC8-204ENST00000578252 SPRR4Q96PI1 79 aa6.73□□□□□ -1.33
TRAPPC8-204ENST00000578252 TRBV20-1A0A075B6N2 111 aa6.72□□□□□ -1.33
TRAPPC8-204ENST00000578252 A0A1W2PPM0 123 aa6.72□□□□□ -1.33
TRAPPC8-204ENST00000578252 LST1O00453 97 aa6.72□□□□□ -1.33
TRAPPC8-204ENST00000578252 DNAL4O96015 105 aa6.72□□□□□ -1.33
TRAPPC8-204ENST00000578252 CLEC2BQ92478 149 aa6.72□□□□□ -1.33
TRAPPC8-204ENST00000578252 FAM218AQ96MZ4 157 aa6.72□□□□□ -1.33
TRAPPC8-204ENST00000578252 NAA38Q9BRA0 125 aaKnown RBP6.72□□□□□ -1.33
TRAPPC8-204ENST00000578252 PKHD1L1Q86WI1 4243 aa6.71□□□□□ -1.33
TRAPPC8-204ENST00000578252 TRACP01848 142 aa6.71□□□□□ -1.34
TRAPPC8-204ENST00000578252 FABP2P12104 132 aa6.71□□□□□ -1.34
TRAPPC8-204ENST00000578252 FAM229BQ4G0N7 80 aa6.71□□□□□ -1.34
TRAPPC8-204ENST00000578252 Q6ZQY7 126 aa6.71□□□□□ -1.34
TRAPPC8-204ENST00000578252 PPDPFLQ8WWR9 84 aa6.71□□□□□ -1.34
TRAPPC8-204ENST00000578252 IGLV5-48A0A075B6I7 105 aa6.7□□□□□ -1.34
TRAPPC8-204ENST00000578252 TEX49A0A1B0GTD5 131 aa6.7□□□□□ -1.34
TRAPPC8-204ENST00000578252 KRTAP23-1A1A580 65 aa6.7□□□□□ -1.34
TRAPPC8-204ENST00000578252 H3BQ85 93 aa6.7□□□□□ -1.34
TRAPPC8-204ENST00000578252 SPRR1BP22528 89 aa6.7□□□□□ -1.34
TRAPPC8-204ENST00000578252 ATXN8Q156A1 80 aa6.7□□□□□ -1.34
TRAPPC8-204ENST00000578252 LINC00483Q53H64 154 aa6.7□□□□□ -1.34
TRAPPC8-204ENST00000578252 ST20-AS1Q8NBB2 130 aa6.7□□□□□ -1.34
TRAPPC8-204ENST00000578252 KRTAP1-4P0C5Y4 121 aa6.69□□□□□ -1.34
TRAPPC8-204ENST00000578252 GAGE2AQ6NT46 116 aa6.69□□□□□ -1.34
TRAPPC8-204ENST00000578252 TCL1BO95988 128 aa6.68□□□□□ -1.34
TRAPPC8-204ENST00000578252 OXTP01178 125 aa6.67□□□□□ -1.34
TRAPPC8-204ENST00000578252 CRYGAP11844 174 aa6.67□□□□□ -1.34
TRAPPC8-204ENST00000578252 C21orf62-AS1Q17RA5 79 aa6.67□□□□□ -1.34
TRAPPC8-204ENST00000578252 DEFB105AQ8NG35 78 aa6.67□□□□□ -1.34
TRAPPC8-204ENST00000578252 LINC01600Q96MT4 127 aa6.67□□□□□ -1.34
TRAPPC8-204ENST00000578252 ORMDL1Q9P0S3 153 aa6.67□□□□□ -1.34
TRAPPC8-204ENST00000578252 LINC01547P58512 204 aaPredicted RBP6.66□□□□□ -1.34
TRAPPC8-204ENST00000578252 LAMTOR3Q9UHA4 124 aa6.66□□□□□ -1.34
TRAPPC8-204ENST00000578252 Q8N377 158 aa6.65□□□□□ -1.34
TRAPPC8-204ENST00000578252 KRTAP9-8Q9BYQ0 159 aa6.65□□□□□ -1.34
TRAPPC8-204ENST00000578252 SPCS1Q9Y6A9 102 aa6.65□□□□□ -1.34
TRAPPC8-204ENST00000578252 ABCA13Q86UQ4 5058 aa6.65□□□□□ -1.35
TRAPPC8-204ENST00000578252 FLG2Q5D862 2391 aaPredicted RBP6.64□□□□□ -1.35
TRAPPC8-204ENST00000578252 TMEM256-PLSCR3K7ERE1 68 aa6.64□□□□□ -1.35
TRAPPC8-204ENST00000578252 ANAPC11Q9NYG5 84 aa6.64□□□□□ -1.35
TRAPPC8-204ENST00000578252 A0A087X002 238 aa6.63□□□□□ -1.35
TRAPPC8-204ENST00000578252 KRTAP29-1A8MX34 341 aaPredicted RBP6.63□□□□□ -1.35
TRAPPC8-204ENST00000578252 F8WEM9 126 aa6.63□□□□□ -1.35
TRAPPC8-204ENST00000578252 GTF2H5Q6ZYL4 71 aa6.62□□□□□ -1.35
TRAPPC8-204ENST00000578252 SMIM29Q86T20 159 aa6.62□□□□□ -1.35
TRAPPC8-204ENST00000578252 PRR26Q8N8Z3 221 aa6.62□□□□□ -1.35
TRAPPC8-204ENST00000578252 IGLV9-49A0A0B4J1Y8 123 aa6.61□□□□□ -1.35
TRAPPC8-204ENST00000578252 K7EP34 96 aa6.61□□□□□ -1.35
TRAPPC8-204ENST00000578252 KRTAP13-2Q52LG2 175 aa6.61□□□□□ -1.35
TRAPPC8-204ENST00000578252 SSBP3-AS1Q7Z2R9 100 aa6.61□□□□□ -1.35
TRAPPC8-204ENST00000578252 Q8NBF4 154 aa6.61□□□□□ -1.35
TRAPPC8-204ENST00000578252 TYMSOSQ8TAI1 123 aa6.61□□□□□ -1.35
TRAPPC8-204ENST00000578252 C9JAW5 83 aa6.6□□□□□ -1.35
TRAPPC8-204ENST00000578252 H3BMG7 143 aa6.6□□□□□ -1.35
TRAPPC8-204ENST00000578252 BAALC-AS2P0C853 105 aa6.6□□□□□ -1.35
TRAPPC8-204ENST00000578252 UBE2V1Q13404 147 aa6.6□□□□□ -1.35
TRAPPC8-204ENST00000578252 C9orf153Q5TBE3 101 aa6.6□□□□□ -1.35
TRAPPC8-204ENST00000578252 H3BT86 120 aa6.59□□□□□ -1.35
TRAPPC8-204ENST00000578252 NDUFV3P56181 108 aaKnown RBP6.59□□□□□ -1.35
TRAPPC8-204ENST00000578252 KRTAP10-8P60410 259 aa6.59□□□□□ -1.35
TRAPPC8-204ENST00000578252 MOBPQ13875 183 aa6.59□□□□□ -1.35
TRAPPC8-204ENST00000578252 C3orf22Q8N5N4 141 aa6.59□□□□□ -1.35
TRAPPC8-204ENST00000578252 MYCBP2O75592 4640 aa6.59□□□□□ -1.36
TRAPPC8-204ENST00000578252 FAT3Q8TDW7 4589 aa6.58□□□□□ -1.36
TRAPPC8-204ENST00000578252 IGLV8-61A0A075B6I0 122 aa6.57□□□□□ -1.36
TRAPPC8-204ENST00000578252 Q6JHZ5 121 aa6.57□□□□□ -1.36
TRAPPC8-204ENST00000578252 LRP1Q07954 4544 aaKnown RBP6.56□□□□□ -1.36
TRAPPC8-204ENST00000578252 ANKRD29Q8N6D5 301 aa6.56□□□□□ -1.36
TRAPPC8-204ENST00000578252 MT1HL1P0DM35 61 aa6.55□□□□□ -1.36
TRAPPC8-204ENST00000578252 JMJD7-PLA2G4BH0Y9G9 81 aa6.54□□□□□ -1.36
TRAPPC8-204ENST00000578252 SPAG11AQ6PDA7 123 aa6.54□□□□□ -1.36
TRAPPC8-204ENST00000578252 LINC00304Q8N9R0 145 aa6.54□□□□□ -1.36
TRAPPC8-204ENST00000578252 PCLOQ9Y6V0 5065 aa6.53□□□□□ -1.36
TRAPPC8-204ENST00000578252 RBM3P98179 157 aaKnown RBP6.52□□□□□ -1.37
TRAPPC8-204ENST00000578252 CD164Q04900 197 aa6.52□□□□□ -1.37
TRAPPC8-204ENST00000578252 KRTAP15-1Q3LI76 137 aa6.52□□□□□ -1.37
TRAPPC8-204ENST00000578252 F8W1H4 67 aa6.51□□□□□ -1.37
TRAPPC8-204ENST00000578252 IGFL1Q6UW32 110 aa6.51□□□□□ -1.37
TRAPPC8-204ENST00000578252 MTURNQ8N3F0 131 aa6.51□□□□□ -1.37
TRAPPC8-204ENST00000578252 PRO0461Q9UI25 63 aa6.51□□□□□ -1.37
TRAPPC8-204ENST00000578252 DMBT1Q9UGM3 2413 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC8-204ENST00000578252 SPINK1P00995 79 aa6.5□□□□□ -1.37
TRAPPC8-204ENST00000578252 DSCR8Q96T75 97 aa6.5□□□□□ -1.37
TRAPPC8-204ENST00000578252 PDE6GP18545 87 aa6.49□□□□□ -1.37
TRAPPC8-204ENST00000578252 RPS29P62273 56 aaKnown RBP6.49□□□□□ -1.37
TRAPPC8-204ENST00000578252 TNXBP22105 4242 aa6.48□□□□□ -1.37
TRAPPC8-204ENST00000578252 TRBV7-4A0A0J9YYF1 115 aa6.48□□□□□ -1.37
TRAPPC8-204ENST00000578252 A0A1B0GV72 72 aa6.48□□□□□ -1.37
TRAPPC8-204ENST00000578252 Q6Q795 121 aa6.48□□□□□ -1.37
TRAPPC8-204ENST00000578252 OBSCN-AS1Q96MR7 158 aa6.48□□□□□ -1.37
TRAPPC8-204ENST00000578252 SCGB1A1P11684 91 aa6.47□□□□□ -1.37
TRAPPC8-204ENST00000578252 TEN1Q86WV5 123 aa6.47□□□□□ -1.37
TRAPPC8-204ENST00000578252 LIMD2Q9BT23 127 aa6.47□□□□□ -1.37
TRAPPC8-204ENST00000578252 LOC110117498A0A087WWA1 95 aa6.46□□□□□ -1.38
TRAPPC8-204ENST00000578252 K7ERU9 68 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms