RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 HIST1H4AP62805 103 aaKnown RBP17.04■□□□□ 0.32
LIMD2-203ENST00000578067 KRTAP10-2P60368 255 aa17.03■□□□□ 0.32
LIMD2-203ENST00000578067 Q8NBF4 154 aa17.03■□□□□ 0.32
LIMD2-203ENST00000578067 A0A087WVE0 104 aa17.03■□□□□ 0.32
LIMD2-203ENST00000578067 IGLV8-61A0A075B6I0 122 aa17.01■□□□□ 0.31
LIMD2-203ENST00000578067 CXCL6P80162 114 aa17.01■□□□□ 0.31
LIMD2-203ENST00000578067 PSORS1C2Q9UIG4 136 aa17.01■□□□□ 0.31
LIMD2-203ENST00000578067 NREPQ16612 68 aa16.99■□□□□ 0.31
LIMD2-203ENST00000578067 SPRR4Q96PI1 79 aa16.98■□□□□ 0.31
LIMD2-203ENST00000578067 IGFL1Q6UW32 110 aa16.96■□□□□ 0.31
LIMD2-203ENST00000578067 CRYGAP11844 174 aa16.91■□□□□ 0.3
LIMD2-203ENST00000578067 FRAS1Q86XX4 4008 aa16.91■□□□□ 0.3
LIMD2-203ENST00000578067 A0A0G2JQZ4 141 aa16.91■□□□□ 0.3
LIMD2-203ENST00000578067 SCXQ7RTU7 201 aa16.91■□□□□ 0.3
LIMD2-203ENST00000578067 FAM30AQ9NZY2 134 aa16.9■□□□□ 0.3
LIMD2-203ENST00000578067 ATOX1O00244 68 aa16.89■□□□□ 0.29
LIMD2-203ENST00000578067 ZNF861PO60384 105 aa16.86■□□□□ 0.29
LIMD2-203ENST00000578067 HYDINQ4G0P3 5121 aa16.86■□□□□ 0.29
LIMD2-203ENST00000578067 CIRBP-AS1Q8TBR5 109 aa16.86■□□□□ 0.29
LIMD2-203ENST00000578067 DNAH11Q96DT5 4516 aa16.84■□□□□ 0.29
LIMD2-203ENST00000578067 SRRM2Q9UQ35 2752 aaKnown RBP16.84■□□□□ 0.29
LIMD2-203ENST00000578067 BPY2O14599 106 aa16.84■□□□□ 0.29
LIMD2-203ENST00000578067 ZNF706Q9Y5V0 76 aaPredicted RBP16.84■□□□□ 0.29
LIMD2-203ENST00000578067 SVIPQ8NHG7 77 aa16.83■□□□□ 0.28
LIMD2-203ENST00000578067 KRTAP10-1P60331 282 aa16.82■□□□□ 0.28
LIMD2-203ENST00000578067 LINC00483Q53H64 154 aa16.82■□□□□ 0.28
LIMD2-203ENST00000578067 Q6ZSA8 131 aa16.82■□□□□ 0.28
LIMD2-203ENST00000578067 DNAH8Q96JB1 4490 aa16.81■□□□□ 0.28
LIMD2-203ENST00000578067 CCDC179H3BU77 68 aa16.8■□□□□ 0.28
LIMD2-203ENST00000578067 IGLV7-43P04211 117 aa16.78■□□□□ 0.28
LIMD2-203ENST00000578067 DNAH5Q8TE73 4624 aa16.77■□□□□ 0.28
LIMD2-203ENST00000578067 LCE6AA0A183 80 aa16.75■□□□□ 0.27
LIMD2-203ENST00000578067 FAT2Q9NYQ8 4349 aa16.74■□□□□ 0.27
LIMD2-203ENST00000578067 A0A087WSZ3 146 aa16.74■□□□□ 0.27
LIMD2-203ENST00000578067 Q8N9L7 120 aa16.73■□□□□ 0.27
LIMD2-203ENST00000578067 IGKV4-1P06312 121 aa16.72■□□□□ 0.27
LIMD2-203ENST00000578067 PKD1P98161 4303 aa16.71■□□□□ 0.27
LIMD2-203ENST00000578067 IGLV9-49A0A0B4J1Y8 123 aa16.71■□□□□ 0.27
LIMD2-203ENST00000578067 COX7CP15954 63 aa16.7■□□□□ 0.26
LIMD2-203ENST00000578067 C9orf153Q5TBE3 101 aa16.69■□□□□ 0.26
LIMD2-203ENST00000578067 UQCRQO14949 82 aa16.69■□□□□ 0.26
LIMD2-203ENST00000578067 SERP2Q8N6R1 65 aa16.69■□□□□ 0.26
LIMD2-203ENST00000578067 RPL37AP61513 92 aaKnown RBP16.66■□□□□ 0.26
LIMD2-203ENST00000578067 LINC00336Q6ZUF6 198 aa16.63■□□□□ 0.25
LIMD2-203ENST00000578067 DSCR10P59022 87 aa16.63■□□□□ 0.25
LIMD2-203ENST00000578067 ANAPC11Q9NYG5 84 aa16.63■□□□□ 0.25
LIMD2-203ENST00000578067 SACSQ9NZJ4 4579 aa16.61■□□□□ 0.25
LIMD2-203ENST00000578067 MOBPQ13875 183 aa16.58■□□□□ 0.24
LIMD2-203ENST00000578067 DEFB116Q30KQ4 102 aa16.56■□□□□ 0.24
LIMD2-203ENST00000578067 SMIM20Q8N5G0 67 aa16.56■□□□□ 0.24
LIMD2-203ENST00000578067 K7EQZ3 153 aa16.54■□□□□ 0.24
LIMD2-203ENST00000578067 TRAV7A0A075B6U4 112 aa16.52■□□□□ 0.24
LIMD2-203ENST00000578067 LINC00472Q9H8W2 130 aa16.5■□□□□ 0.23
LIMD2-203ENST00000578067 HRCT1Q6UXD1 115 aa16.47■□□□□ 0.23
LIMD2-203ENST00000578067 A0A1B0GVY2 172 aa16.44■□□□□ 0.22
LIMD2-203ENST00000578067 LRP1BQ9NZR2 4599 aa16.42■□□□□ 0.22
LIMD2-203ENST00000578067 SS18L2Q9UHA2 77 aa16.41■□□□□ 0.22
LIMD2-203ENST00000578067 J3KT08 172 aa16.38■□□□□ 0.21
LIMD2-203ENST00000578067 HCG22E2RYF7 251 aa16.38■□□□□ 0.21
LIMD2-203ENST00000578067 SSBP3-AS1Q7Z2R9 100 aa16.38■□□□□ 0.21
LIMD2-203ENST00000578067 A8MWP4 228 aa16.37■□□□□ 0.21
LIMD2-203ENST00000578067 Q96NJ1 140 aa16.35■□□□□ 0.21
LIMD2-203ENST00000578067 OCR1Q9BZK8 76 aa16.35■□□□□ 0.21
LIMD2-203ENST00000578067 PRR15Q8IV56 129 aa16.35■□□□□ 0.21
LIMD2-203ENST00000578067 C20orf197Q8N268 126 aa16.33■□□□□ 0.2
LIMD2-203ENST00000578067 FAM229BQ4G0N7 80 aa16.32■□□□□ 0.2
LIMD2-203ENST00000578067 CYSTM1Q9H1C7 97 aa16.32■□□□□ 0.2
LIMD2-203ENST00000578067 CD164Q04900 197 aa16.3■□□□□ 0.2
LIMD2-203ENST00000578067 A0A087X002 238 aa16.29■□□□□ 0.2
LIMD2-203ENST00000578067 RYR2Q92736 4967 aa16.29■□□□□ 0.2
LIMD2-203ENST00000578067 PKHD1P08F94 4074 aa16.27■□□□□ 0.2
LIMD2-203ENST00000578067 KRTAP1-4P0C5Y4 121 aa16.26■□□□□ 0.19
LIMD2-203ENST00000578067 KRTAP13-2Q52LG2 175 aa16.26■□□□□ 0.19
LIMD2-203ENST00000578067 WFDC13Q8IUB5 93 aa16.26■□□□□ 0.19
LIMD2-203ENST00000578067 NDUFB1O75438 58 aa16.25■□□□□ 0.19
LIMD2-203ENST00000578067 KRTAP29-1A8MX34 341 aaPredicted RBP16.21■□□□□ 0.19
LIMD2-203ENST00000578067 KLKP1Q107X0 134 aa16.21■□□□□ 0.18
LIMD2-203ENST00000578067 CASC2Q6XLA1 102 aa16.19■□□□□ 0.18
LIMD2-203ENST00000578067 DYNC1H1Q14204 4646 aaKnown RBP16.19■□□□□ 0.18
LIMD2-203ENST00000578067 VPS13BQ7Z7G8 4022 aa16.18■□□□□ 0.18
LIMD2-203ENST00000578067 SPINK6Q6UWN8 80 aa16.18■□□□□ 0.18
LIMD2-203ENST00000578067 SMR3BP02814 79 aaPredicted RBP16.17■□□□□ 0.18
LIMD2-203ENST00000578067 TMEM254Q8TBM7 123 aa16.16■□□□□ 0.18
LIMD2-203ENST00000578067 SNURFQ9Y675 71 aa16.16■□□□□ 0.18
LIMD2-203ENST00000578067 MMP24-AS1A0A0U1RRL7 71 aa16.14■□□□□ 0.17
LIMD2-203ENST00000578067 PLA2G1BP04054 148 aaKnown RBP16.14■□□□□ 0.17
LIMD2-203ENST00000578067 CDK2AP2O75956 126 aa16.13■□□□□ 0.17
LIMD2-203ENST00000578067 KMT2CQ8NEZ4 4911 aaKnown RBP16.12■□□□□ 0.17
LIMD2-203ENST00000578067 TMEM258P61165 79 aa16.11■□□□□ 0.17
LIMD2-203ENST00000578067 ASB16-AS1Q495Z4 193 aa16.11■□□□□ 0.17
LIMD2-203ENST00000578067 A0A1B0GVX0 72 aa16.1■□□□□ 0.17
LIMD2-203ENST00000578067 A0A0U1RQV1 116 aa16.07■□□□□ 0.16
LIMD2-203ENST00000578067 IGHV6-1A0A0B4J1U7 121 aa16.06■□□□□ 0.16
LIMD2-203ENST00000578067 C8orf17Q9NRJ1 99 aa16.06■□□□□ 0.16
LIMD2-203ENST00000578067 hDV103S1A0JD37 113 aa16.06■□□□□ 0.16
LIMD2-203ENST00000578067 H7BZZ5 65 aa16.06■□□□□ 0.16
LIMD2-203ENST00000578067 C5orf47Q569G3 176 aa16.04■□□□□ 0.16
LIMD2-203ENST00000578067 Q5XG85 94 aa16.04■□□□□ 0.16
LIMD2-203ENST00000578067 TYMSOSQ8TAI1 123 aa16.03■□□□□ 0.16
LIMD2-203ENST00000578067 NDUFC1O43677 76 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms