RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 LAMA5O15230 3695 aa7.07□□□□□ -1.28
RNF43-203ENST00000577716 K7EIL1 84 aa7.06□□□□□ -1.28
RNF43-203ENST00000577716 A0A1B0GU69 56 aa7.05□□□□□ -1.28
RNF43-203ENST00000577716 RELNP78509 3460 aa7.05□□□□□ -1.28
RNF43-203ENST00000577716 IGLV5-48A0A075B6I7 105 aa7.05□□□□□ -1.28
RNF43-203ENST00000577716 CRYBG3Q68DQ2 2970 aa7.04□□□□□ -1.28
RNF43-203ENST00000577716 MRPL34Q9BQ48 92 aaKnown RBP7.03□□□□□ -1.28
RNF43-203ENST00000577716 Q8NDZ9 215 aa7.03□□□□□ -1.28
RNF43-203ENST00000577716 LINC00313P59037 77 aa7.02□□□□□ -1.29
RNF43-203ENST00000577716 COA5Q86WW8 74 aa7.02□□□□□ -1.29
RNF43-203ENST00000577716 C9orf163Q8N9P6 203 aa7.02□□□□□ -1.29
RNF43-203ENST00000577716 C7orf65Q6ZTY9 151 aa7.01□□□□□ -1.29
RNF43-203ENST00000577716 LOC101927531A0A1B0GV80 90 aa7.01□□□□□ -1.29
RNF43-203ENST00000577716 NF1P21359 2839 aa7□□□□□ -1.29
RNF43-203ENST00000577716 ZFHX4Q86UP3 3567 aa7□□□□□ -1.29
RNF43-203ENST00000577716 C8orf17Q9NRJ1 99 aa7□□□□□ -1.29
RNF43-203ENST00000577716 OCR1Q9BZK8 76 aa6.99□□□□□ -1.29
RNF43-203ENST00000577716 DCHS2Q6V1P9 2916 aa6.99□□□□□ -1.29
RNF43-203ENST00000577716 APCP25054 2843 aa6.99□□□□□ -1.29
RNF43-203ENST00000577716 NSD1Q96L73 2696 aaPredicted RBP6.98□□□□□ -1.29
RNF43-203ENST00000577716 CYSTM1Q9H1C7 97 aa6.97□□□□□ -1.29
RNF43-203ENST00000577716 FAM229AH3BQW9 127 aa6.97□□□□□ -1.29
RNF43-203ENST00000577716 CELSR2Q9HCU4 2923 aa6.96□□□□□ -1.29
RNF43-203ENST00000577716 IGLV5-37A0A075B6J1 123 aa6.96□□□□□ -1.29
RNF43-203ENST00000577716 FBN2P35556 2912 aa6.96□□□□□ -1.3
RNF43-203ENST00000577716 A0A1B0GVX0 72 aa6.96□□□□□ -1.3
RNF43-203ENST00000577716 CYP4F30PQ9H0H9 118 aa6.96□□□□□ -1.3
RNF43-203ENST00000577716 ZNF861PO60384 105 aa6.95□□□□□ -1.3
RNF43-203ENST00000577716 ANAPC11Q9NYG5 84 aa6.95□□□□□ -1.3
RNF43-203ENST00000577716 CNBPP62633 177 aaKnown RBP6.95□□□□□ -1.3
RNF43-203ENST00000577716 C8orf87E5RJ46 101 aa6.95□□□□□ -1.3
RNF43-203ENST00000577716 ATP11AUNQ6ZP68 121 aa6.95□□□□□ -1.3
RNF43-203ENST00000577716 TYMSOSQ8TAI1 123 aa6.94□□□□□ -1.3
RNF43-203ENST00000577716 DSCR10P59022 87 aa6.94□□□□□ -1.3
RNF43-203ENST00000577716 SPRR4Q96PI1 79 aa6.93□□□□□ -1.3
RNF43-203ENST00000577716 IGLV8-61A0A075B6I0 122 aa6.93□□□□□ -1.3
RNF43-203ENST00000577716 A0A087WTM6 91 aa6.92□□□□□ -1.3
RNF43-203ENST00000577716 STAB2Q8WWQ8 2551 aa6.91□□□□□ -1.3
RNF43-203ENST00000577716 SSBP3-AS1Q7Z2R9 100 aa6.91□□□□□ -1.3
RNF43-203ENST00000577716 Q96NJ1 140 aa6.9□□□□□ -1.3
RNF43-203ENST00000577716 PSORS1C2Q9UIG4 136 aa6.9□□□□□ -1.3
RNF43-203ENST00000577716 APLNQ9ULZ1 77 aa6.89□□□□□ -1.31
RNF43-203ENST00000577716 BAHCC1Q9P281 2608 aa6.89□□□□□ -1.31
RNF43-203ENST00000577716 WIPF1O43516 503 aa6.89□□□□□ -1.31
RNF43-203ENST00000577716 PLA2G1BP04054 148 aaKnown RBP6.89□□□□□ -1.31
RNF43-203ENST00000577716 SPANXA2-OT1Q8N9U9 137 aa6.89□□□□□ -1.31
RNF43-203ENST00000577716 HIVEP1P15822 2718 aa6.87□□□□□ -1.31
RNF43-203ENST00000577716 MXRA5Q9NR99 2828 aa6.86□□□□□ -1.31
RNF43-203ENST00000577716 SPRR1AP35321 89 aa6.85□□□□□ -1.31
RNF43-203ENST00000577716 NIPBLQ6KC79 2804 aaeCLIP6.85□□□□□ -1.31
RNF43-203ENST00000577716 UQCR11O14957 56 aa6.84□□□□□ -1.31
RNF43-203ENST00000577716 IGLV7-43P04211 117 aa6.84□□□□□ -1.31
RNF43-203ENST00000577716 Q5XG85 94 aa6.84□□□□□ -1.31
RNF43-203ENST00000577716 FP248Q71RG6 208 aaPredicted RBP6.82□□□□□ -1.32
RNF43-203ENST00000577716 WWC2-AS2Q96NR7 200 aa6.82□□□□□ -1.32
RNF43-203ENST00000577716 SMG1Q96Q15 3661 aaKnown RBP6.81□□□□□ -1.32
RNF43-203ENST00000577716 KRTAP26-1Q6PEX3 210 aa6.81□□□□□ -1.32
RNF43-203ENST00000577716 Q1T7F1 81 aa6.8□□□□□ -1.32
RNF43-203ENST00000577716 PRR26Q8N8Z3 221 aa6.8□□□□□ -1.32
RNF43-203ENST00000577716 FAM229BQ4G0N7 80 aa6.79□□□□□ -1.32
RNF43-203ENST00000577716 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.79□□□□□ -1.32
RNF43-203ENST00000577716 OXTP01178 125 aa6.78□□□□□ -1.32
RNF43-203ENST00000577716 MIR22HGQ0VDD5 57 aa6.77□□□□□ -1.33
RNF43-203ENST00000577716 LINC00304Q8N9R0 145 aa6.76□□□□□ -1.33
RNF43-203ENST00000577716 IGLV7-46A0A075B6I9 117 aa6.75□□□□□ -1.33
RNF43-203ENST00000577716 MMP24-AS1A0A0U1RRL7 71 aa6.74□□□□□ -1.33
RNF43-203ENST00000577716 KTN1-AS1Q86SY8 53 aa6.74□□□□□ -1.33
RNF43-203ENST00000577716 CSMD1Q96PZ7 3565 aa6.74□□□□□ -1.33
RNF43-203ENST00000577716 CD164Q04900 197 aa6.73□□□□□ -1.33
RNF43-203ENST00000577716 FLG2Q5D862 2391 aaPredicted RBP6.73□□□□□ -1.33
RNF43-203ENST00000577716 CELSR1Q9NYQ6 3014 aa6.73□□□□□ -1.33
RNF43-203ENST00000577716 CDC42SE1Q9NRR8 79 aa6.73□□□□□ -1.33
RNF43-203ENST00000577716 KRTAP1-5Q9BYS1 174 aa6.72□□□□□ -1.33
RNF43-203ENST00000577716 LINC00472Q9H8W2 130 aa6.72□□□□□ -1.33
RNF43-203ENST00000577716 C9orf92A6NGG3 77 aa6.71□□□□□ -1.34
RNF43-203ENST00000577716 SMR3BP02814 79 aaPredicted RBP6.71□□□□□ -1.34
RNF43-203ENST00000577716 SPRR1BP22528 89 aa6.71□□□□□ -1.34
RNF43-203ENST00000577716 Q8N9P0 234 aaPredicted RBP6.71□□□□□ -1.34
RNF43-203ENST00000577716 TNP2Q05952 138 aa6.71□□□□□ -1.34
RNF43-203ENST00000577716 KMT2BQ9UMN6 2715 aaPredicted RBP6.71□□□□□ -1.34
RNF43-203ENST00000577716 Q8N1X5 172 aa6.69□□□□□ -1.34
RNF43-203ENST00000577716 DMBT1Q9UGM3 2413 aaPredicted RBP6.68□□□□□ -1.34
RNF43-203ENST00000577716 KRTAP4-16G5E9R7 235 aaPredicted RBP6.67□□□□□ -1.34
RNF43-203ENST00000577716 HRES1P13985 223 aa6.66□□□□□ -1.34
RNF43-203ENST00000577716 SVEP1Q4LDE5 3571 aa6.66□□□□□ -1.34
RNF43-203ENST00000577716 LCA10Q71F78 164 aa6.65□□□□□ -1.35
RNF43-203ENST00000577716 Q75L30 129 aa6.64□□□□□ -1.35
RNF43-203ENST00000577716 PLAC8Q9NZF1 115 aa6.63□□□□□ -1.35
RNF43-203ENST00000577716 LINC01558Q9Y6Z2 57 aa6.62□□□□□ -1.35
RNF43-203ENST00000577716 Q5VV11 94 aa6.62□□□□□ -1.35
RNF43-203ENST00000577716 SPINT4Q6UDR6 99 aa6.57□□□□□ -1.36
RNF43-203ENST00000577716 KRTAP29-1A8MX34 341 aaPredicted RBP6.56□□□□□ -1.36
RNF43-203ENST00000577716 TENM4Q6N022 2769 aa6.56□□□□□ -1.36
RNF43-203ENST00000577716 PANO1I0J062 215 aa6.55□□□□□ -1.36
RNF43-203ENST00000577716 ZCCHC13Q8WW36 166 aaKnown RBP6.55□□□□□ -1.36
RNF43-203ENST00000577716 Q5W150 140 aa6.55□□□□□ -1.36
RNF43-203ENST00000577716 CUBNO60494 3623 aa6.54□□□□□ -1.36
RNF43-203ENST00000577716 SPINK7P58062 85 aa6.53□□□□□ -1.36
RNF43-203ENST00000577716 SPENQ96T58 3664 aaKnown RBP6.53□□□□□ -1.36
RNF43-203ENST00000577716 RBM12B-AS1Q9P1G2 102 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms