RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 HIGD2AQ9BW72 106 aa3.43□□□□□ -1.86
VAPA-203ENST00000577539 C1orf137Q5JT78 98 aa3.43□□□□□ -1.86
VAPA-203ENST00000577539 IGLV1-50A0A075B6I6 118 aa3.43□□□□□ -1.86
VAPA-203ENST00000577539 F8WEM9 126 aa3.43□□□□□ -1.86
VAPA-203ENST00000577539 ERC2-IT1O76042 136 aa3.43□□□□□ -1.86
VAPA-203ENST00000577539 Q9BRP9 147 aa3.42□□□□□ -1.86
VAPA-203ENST00000577539 A0A0G2JQZ4 141 aa3.42□□□□□ -1.86
VAPA-203ENST00000577539 A0A1W2PNN7 141 aa3.42□□□□□ -1.86
VAPA-203ENST00000577539 TLX1NBP0CAT3 122 aa3.42□□□□□ -1.86
VAPA-203ENST00000577539 PRLHP81277 87 aa3.42□□□□□ -1.86
VAPA-203ENST00000577539 A0A0U1RQV1 116 aa3.41□□□□□ -1.86
VAPA-203ENST00000577539 REG3GQ6UW15 175 aa3.41□□□□□ -1.86
VAPA-203ENST00000577539 C8orf87E5RJ46 101 aa3.41□□□□□ -1.86
VAPA-203ENST00000577539 A0A1W2PNM2 257 aa3.41□□□□□ -1.86
VAPA-203ENST00000577539 A0A096LNI7 61 aa3.4□□□□□ -1.86
VAPA-203ENST00000577539 IGLV5-37A0A075B6J1 123 aa3.4□□□□□ -1.86
VAPA-203ENST00000577539 IGKV4-1P06312 121 aa3.4□□□□□ -1.86
VAPA-203ENST00000577539 RPS28P62857 69 aaKnown RBP3.4□□□□□ -1.86
VAPA-203ENST00000577539 KRTAP7-1Q8IUC3 87 aa3.4□□□□□ -1.86
VAPA-203ENST00000577539 H7BZZ5 65 aa3.4□□□□□ -1.87
VAPA-203ENST00000577539 BCE1O60756 84 aa3.4□□□□□ -1.87
VAPA-203ENST00000577539 CHTF8P0CG12 524 aa3.4□□□□□ -1.87
VAPA-203ENST00000577539 DEFB116Q30KQ4 102 aa3.4□□□□□ -1.87
VAPA-203ENST00000577539 IGLV5-48A0A075B6I7 105 aa3.39□□□□□ -1.87
VAPA-203ENST00000577539 PMAIP1Q13794 54 aa3.39□□□□□ -1.87
VAPA-203ENST00000577539 Q8NBF4 154 aa3.39□□□□□ -1.87
VAPA-203ENST00000577539 TMEM254Q8TBM7 123 aa3.39□□□□□ -1.87
VAPA-203ENST00000577539 KRTAP1-5Q9BYS1 174 aa3.39□□□□□ -1.87
VAPA-203ENST00000577539 KRTAP4-16G5E9R7 235 aaPredicted RBP3.38□□□□□ -1.87
VAPA-203ENST00000577539 SPRR1AP35321 89 aa3.38□□□□□ -1.87
VAPA-203ENST00000577539 KLKP1Q107X0 134 aa3.38□□□□□ -1.87
VAPA-203ENST00000577539 SMIM29Q86T20 159 aa3.38□□□□□ -1.87
VAPA-203ENST00000577539 UBE2AP49459 152 aa3.38□□□□□ -1.87
VAPA-203ENST00000577539 PHF5AQ7RTV0 110 aaKnown RBP3.38□□□□□ -1.87
VAPA-203ENST00000577539 A0A087WSZ3 146 aa3.37□□□□□ -1.87
VAPA-203ENST00000577539 C16orf90A8MZG2 172 aa3.37□□□□□ -1.87
VAPA-203ENST00000577539 WFDC13Q8IUB5 93 aa3.36□□□□□ -1.87
VAPA-203ENST00000577539 K7EQZ3 153 aa3.36□□□□□ -1.87
VAPA-203ENST00000577539 SERP1Q9Y6X1 66 aa3.36□□□□□ -1.87
VAPA-203ENST00000577539 NDUFC1O43677 76 aa3.36□□□□□ -1.87
VAPA-203ENST00000577539 C14orf177Q52M58 125 aa3.36□□□□□ -1.87
VAPA-203ENST00000577539 IGFL1Q6UW32 110 aa3.35□□□□□ -1.87
VAPA-203ENST00000577539 OCR1Q9BZK8 76 aa3.35□□□□□ -1.87
VAPA-203ENST00000577539 TENM2Q9NT68 2774 aa3.35□□□□□ -1.87
VAPA-203ENST00000577539 EPM2AB3EWF7 344 aa3.35□□□□□ -1.87
VAPA-203ENST00000577539 H0Y9J4 135 aa3.35□□□□□ -1.87
VAPA-203ENST00000577539 DSCR10P59022 87 aa3.34□□□□□ -1.87
VAPA-203ENST00000577539 A0A1B0GW54 56 aa3.34□□□□□ -1.87
VAPA-203ENST00000577539 RPL37AP61513 92 aaKnown RBP3.34□□□□□ -1.87
VAPA-203ENST00000577539 SPRR4Q96PI1 79 aa3.34□□□□□ -1.87
VAPA-203ENST00000577539 APLNQ9ULZ1 77 aa3.34□□□□□ -1.87
VAPA-203ENST00000577539 CNBPP62633 177 aaKnown RBP3.34□□□□□ -1.88
VAPA-203ENST00000577539 PRR4Q16378 134 aa3.34□□□□□ -1.88
VAPA-203ENST00000577539 NOTCH2NLQ7Z3S9 236 aa3.33□□□□□ -1.88
VAPA-203ENST00000577539 KRTAP11-1Q8IUC1 163 aa3.33□□□□□ -1.88
VAPA-203ENST00000577539 B9D2Q9BPU9 175 aa3.33□□□□□ -1.88
VAPA-203ENST00000577539 HCG22E2RYF7 251 aa3.33□□□□□ -1.88
VAPA-203ENST00000577539 NBDYA0A0U1RRE5 68 aa3.32□□□□□ -1.88
VAPA-203ENST00000577539 LINC00474Q9P2X8 69 aa3.32□□□□□ -1.88
VAPA-203ENST00000577539 SMIM26A0A096LP01 95 aa3.32□□□□□ -1.88
VAPA-203ENST00000577539 Q5XG85 94 aa3.32□□□□□ -1.88
VAPA-203ENST00000577539 C9orf163Q8N9P6 203 aa3.32□□□□□ -1.88
VAPA-203ENST00000577539 LRCOL1A6NCL2 159 aa3.32□□□□□ -1.88
VAPA-203ENST00000577539 ATP5EP56381 51 aaPredicted RBP3.31□□□□□ -1.88
VAPA-203ENST00000577539 RBM12B-AS1Q9P1G2 102 aa3.31□□□□□ -1.88
VAPA-203ENST00000577539 ANK2Q01484 3957 aa3.31□□□□□ -1.88
VAPA-203ENST00000577539 PANO1I0J062 215 aa3.31□□□□□ -1.88
VAPA-203ENST00000577539 PRAC1Q96KF2 57 aa3.31□□□□□ -1.88
VAPA-203ENST00000577539 SRRM2Q9UQ35 2752 aaKnown RBP3.3□□□□□ -1.88
VAPA-203ENST00000577539 MP68P56378 58 aa3.3□□□□□ -1.88
VAPA-203ENST00000577539 NUPR2A6NF83 97 aa3.3□□□□□ -1.88
VAPA-203ENST00000577539 LINC00208Q96KT6 92 aa3.3□□□□□ -1.88
VAPA-203ENST00000577539 A0A087X002 238 aa3.29□□□□□ -1.88
VAPA-203ENST00000577539 CASC2Q6XLA1 102 aa3.29□□□□□ -1.88
VAPA-203ENST00000577539 FP248Q71RG6 208 aaPredicted RBP3.29□□□□□ -1.88
VAPA-203ENST00000577539 BRK1Q8WUW1 75 aa3.29□□□□□ -1.88
VAPA-203ENST00000577539 HUWE1Q7Z6Z7 4374 aaKnown RBP3.28□□□□□ -1.88
VAPA-203ENST00000577539 FAM229BQ4G0N7 80 aa3.28□□□□□ -1.88
VAPA-203ENST00000577539 NDUFB1O75438 58 aa3.28□□□□□ -1.88
VAPA-203ENST00000577539 IGLV8-61A0A075B6I0 122 aa3.27□□□□□ -1.89
VAPA-203ENST00000577539 ANAPC11Q9NYG5 84 aa3.27□□□□□ -1.89
VAPA-203ENST00000577539 CSMD3Q7Z407 3707 aa3.27□□□□□ -1.89
VAPA-203ENST00000577539 H0Y9P7 68 aa3.27□□□□□ -1.89
VAPA-203ENST00000577539 PRR15Q8IV56 129 aa3.27□□□□□ -1.89
VAPA-203ENST00000577539 NDUFS5O43920 106 aa3.26□□□□□ -1.89
VAPA-203ENST00000577539 A0A087WTM6 91 aa3.26□□□□□ -1.89
VAPA-203ENST00000577539 A8MWP4 228 aa3.26□□□□□ -1.89
VAPA-203ENST00000577539 RTL8CO15255 209 aa3.26□□□□□ -1.89
VAPA-203ENST00000577539 SPRR1BP22528 89 aa3.26□□□□□ -1.89
VAPA-203ENST00000577539 COL7A1Q02388 2944 aa3.25□□□□□ -1.89
VAPA-203ENST00000577539 MOBPQ13875 183 aa3.25□□□□□ -1.89
VAPA-203ENST00000577539 Q6ZRN7 208 aaPredicted RBP3.25□□□□□ -1.89
VAPA-203ENST00000577539 C1orf64Q8NEQ6 169 aa3.25□□□□□ -1.89
VAPA-203ENST00000577539 LINC00472Q9H8W2 130 aa3.25□□□□□ -1.89
VAPA-203ENST00000577539 IGHV6-1A0A0B4J1U7 121 aa3.24□□□□□ -1.89
VAPA-203ENST00000577539 SPINK6Q6UWN8 80 aa3.24□□□□□ -1.89
VAPA-203ENST00000577539 SPACA4Q8TDM5 124 aa3.24□□□□□ -1.89
VAPA-203ENST00000577539 PSORS1C2Q9UIG4 136 aa3.24□□□□□ -1.89
VAPA-203ENST00000577539 LCE3BQ5TA77 95 aa3.24□□□□□ -1.89
VAPA-203ENST00000577539 ZCCHC13Q8WW36 166 aaKnown RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms