RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 TMEM170BQ5T4T1 132 aa3.56□□□□□ -1.84
NUP88-212ENST00000576708 ATOH7Q8N100 152 aa3.56□□□□□ -1.84
NUP88-212ENST00000576708 HIGD2AQ9BW72 106 aa3.56□□□□□ -1.84
NUP88-212ENST00000576708 TRAPPC1Q9Y5R8 145 aa3.56□□□□□ -1.84
NUP88-212ENST00000576708 TAX1BP3O14907 124 aa3.55□□□□□ -1.84
NUP88-212ENST00000576708 TRGC2P03986 189 aa3.55□□□□□ -1.84
NUP88-212ENST00000576708 IFITM1P13164 125 aa3.55□□□□□ -1.84
NUP88-212ENST00000576708 FABP4P15090 132 aa3.55□□□□□ -1.84
NUP88-212ENST00000576708 LINC00158P58513 81 aa3.55□□□□□ -1.84
NUP88-212ENST00000576708 DAND5Q8N907 189 aa3.55□□□□□ -1.84
NUP88-212ENST00000576708 SPANXDQ9BXN6 97 aa3.55□□□□□ -1.84
NUP88-212ENST00000576708 K7EP34 96 aa3.54□□□□□ -1.84
NUP88-212ENST00000576708 PSPHP1O15172 72 aa3.54□□□□□ -1.84
NUP88-212ENST00000576708 MT-ATP8P03928 68 aa3.54□□□□□ -1.84
NUP88-212ENST00000576708 SMIM13P0DJ93 91 aa3.54□□□□□ -1.84
NUP88-212ENST00000576708 COX17Q14061 63 aa3.54□□□□□ -1.84
NUP88-212ENST00000576708 COA6Q5JTJ3 125 aaKnown RBP3.54□□□□□ -1.84
NUP88-212ENST00000576708 YPEL4Q96NS1 127 aa3.54□□□□□ -1.84
NUP88-212ENST00000576708 SPRR4Q96PI1 79 aa3.54□□□□□ -1.84
NUP88-212ENST00000576708 IMUPQ9GZP8 106 aa3.54□□□□□ -1.84
NUP88-212ENST00000576708 TMEM223A0PJW6 202 aa3.53□□□□□ -1.84
NUP88-212ENST00000576708 A8MUN3 132 aa3.53□□□□□ -1.84
NUP88-212ENST00000576708 LST1O00453 97 aa3.53□□□□□ -1.84
NUP88-212ENST00000576708 NCR3O14931 201 aa3.53□□□□□ -1.84
NUP88-212ENST00000576708 PSMB2P49721 201 aa3.53□□□□□ -1.84
NUP88-212ENST00000576708 TPRXLQ17RH7 258 aa3.53□□□□□ -1.84
NUP88-212ENST00000576708 C6orf99Q4VX62 202 aa3.53□□□□□ -1.84
NUP88-212ENST00000576708 SMCR5Q8TEV8 140 aa3.53□□□□□ -1.84
NUP88-212ENST00000576708 UQCR10Q9UDW1 63 aa3.53□□□□□ -1.84
NUP88-212ENST00000576708 SMIM26A0A096LP01 95 aa3.52□□□□□ -1.85
NUP88-212ENST00000576708 MP68P56378 58 aa3.52□□□□□ -1.85
NUP88-212ENST00000576708 LINC00313P59037 77 aa3.52□□□□□ -1.85
NUP88-212ENST00000576708 MIR7-3HGQ8N6C7 128 aa3.52□□□□□ -1.85
NUP88-212ENST00000576708 Q8NBF4 154 aa3.52□□□□□ -1.85
NUP88-212ENST00000576708 BRK1Q8WUW1 75 aa3.52□□□□□ -1.85
NUP88-212ENST00000576708 UQCRQO14949 82 aa3.51□□□□□ -1.85
NUP88-212ENST00000576708 ZNF73O43830 326 aaPredicted RBP3.51□□□□□ -1.85
NUP88-212ENST00000576708 HIST1H2BKO60814 126 aa3.51□□□□□ -1.85
NUP88-212ENST00000576708 HIST1H2BJP06899 126 aa3.51□□□□□ -1.85
NUP88-212ENST00000576708 HIST1H2BOP23527 126 aa3.51□□□□□ -1.85
NUP88-212ENST00000576708 HIST1H2BBP33778 126 aa3.51□□□□□ -1.85
NUP88-212ENST00000576708 HIST1H2BDP58876 126 aa3.51□□□□□ -1.85
NUP88-212ENST00000576708 HIST1H2BCP62807 126 aa3.51□□□□□ -1.85
NUP88-212ENST00000576708 HIST2H2BEQ16778 126 aa3.51□□□□□ -1.85
NUP88-212ENST00000576708 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.51□□□□□ -1.85
NUP88-212ENST00000576708 HIST1H2BHQ93079 126 aa3.51□□□□□ -1.85
NUP88-212ENST00000576708 IFI27L1Q96BM0 104 aa3.51□□□□□ -1.85
NUP88-212ENST00000576708 HIST1H2BNQ99877 126 aa3.51□□□□□ -1.85
NUP88-212ENST00000576708 HIST1H2BMQ99879 126 aa3.51□□□□□ -1.85
NUP88-212ENST00000576708 IGHV6-1A0A0B4J1U7 121 aa3.5□□□□□ -1.85
NUP88-212ENST00000576708 TRAV12-1A0A0B4J245 112 aa3.5□□□□□ -1.85
NUP88-212ENST00000576708 TRBV10-3A0A0K0K1G6 114 aa3.5□□□□□ -1.85
NUP88-212ENST00000576708 KRTAP4-16G5E9R7 235 aaPredicted RBP3.5□□□□□ -1.85
NUP88-212ENST00000576708 ERC2-IT1O76042 136 aa3.5□□□□□ -1.85
NUP88-212ENST00000576708 SPRR1AP35321 89 aa3.5□□□□□ -1.85
NUP88-212ENST00000576708 TSPEAR-AS2P59090 65 aa3.5□□□□□ -1.85
NUP88-212ENST00000576708 C9orf153Q5TBE3 101 aa3.5□□□□□ -1.85
NUP88-212ENST00000576708 SPAG11AQ6PDA7 123 aa3.5□□□□□ -1.85
NUP88-212ENST00000576708 SFTA2Q6UW10 78 aa3.5□□□□□ -1.85
NUP88-212ENST00000576708 FAM19A2Q8N3H0 131 aa3.5□□□□□ -1.85
NUP88-212ENST00000576708 HIST1H4GQ99525 98 aa3.5□□□□□ -1.85
NUP88-212ENST00000576708 KRTAP4-1Q9BYQ7 146 aa3.5□□□□□ -1.85
NUP88-212ENST00000576708 KCNQ1DNQ9H478 68 aa3.5□□□□□ -1.85
NUP88-212ENST00000576708 ETDCA0A1B0GVM5 59 aa3.49□□□□□ -1.85
NUP88-212ENST00000576708 NDUFAF8A1L188 74 aa3.49□□□□□ -1.85
NUP88-212ENST00000576708 KRTAP13-3Q3SY46 172 aa3.49□□□□□ -1.85
NUP88-212ENST00000576708 PCP2Q8IVA1 136 aa3.49□□□□□ -1.85
NUP88-212ENST00000576708 CHCHD1Q96BP2 118 aaKnown RBP3.49□□□□□ -1.85
NUP88-212ENST00000576708 NDUFA12Q9UI09 145 aa3.49□□□□□ -1.85
NUP88-212ENST00000576708 ZNF706Q9Y5V0 76 aaPredicted RBP3.49□□□□□ -1.85
NUP88-212ENST00000576708 MOBPQ13875 183 aa3.48□□□□□ -1.85
NUP88-212ENST00000576708 LINC00483Q53H64 154 aa3.48□□□□□ -1.85
NUP88-212ENST00000576708 SLC25A34Q6PIV7 304 aa3.48□□□□□ -1.85
NUP88-212ENST00000576708 LCA10Q71F78 164 aa3.48□□□□□ -1.85
NUP88-212ENST00000576708 FP248Q71RG6 208 aaPredicted RBP3.48□□□□□ -1.85
NUP88-212ENST00000576708 PMCHL2Q9BQD1 86 aa3.48□□□□□ -1.85
NUP88-212ENST00000576708 MYMXA0A1B0GTQ4 84 aa3.47□□□□□ -1.85
NUP88-212ENST00000576708 KRTAP16-1A8MUX0 517 aa3.47□□□□□ -1.85
NUP88-212ENST00000576708 FABP2P12104 132 aa3.47□□□□□ -1.85
NUP88-212ENST00000576708 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
NUP88-212ENST00000576708 Q9BRP9 147 aa3.47□□□□□ -1.85
NUP88-212ENST00000576708 TRBV20-1A0A075B6N2 111 aa3.46□□□□□ -1.86
NUP88-212ENST00000576708 LEPROTO15243 131 aa3.46□□□□□ -1.86
NUP88-212ENST00000576708 SPINK1P00995 79 aa3.46□□□□□ -1.86
NUP88-212ENST00000576708 NPC2P61916 151 aa3.46□□□□□ -1.86
NUP88-212ENST00000576708 ASB16-AS1Q495Z4 193 aa3.46□□□□□ -1.86
NUP88-212ENST00000576708 LCE1FQ5T754 118 aa3.46□□□□□ -1.86
NUP88-212ENST00000576708 TEN1Q86WV5 123 aa3.46□□□□□ -1.86
NUP88-212ENST00000576708 Q8N377 158 aa3.46□□□□□ -1.86
NUP88-212ENST00000576708 F8W1H4 67 aa3.45□□□□□ -1.86
NUP88-212ENST00000576708 H3BMG7 143 aa3.45□□□□□ -1.86
NUP88-212ENST00000576708 TMEM256-PLSCR3K7ERE1 68 aa3.45□□□□□ -1.86
NUP88-212ENST00000576708 SERF1AO75920 110 aa3.45□□□□□ -1.86
NUP88-212ENST00000576708 HINT1P49773 126 aaPredicted RBP3.45□□□□□ -1.86
NUP88-212ENST00000576708 KRTAP5-1Q6L8H4 278 aa3.45□□□□□ -1.86
NUP88-212ENST00000576708 SOSTDC1Q6X4U4 206 aa3.45□□□□□ -1.86
NUP88-212ENST00000576708 ST20-AS1Q8NBB2 130 aa3.45□□□□□ -1.86
NUP88-212ENST00000576708 RAB37Q96AX2 223 aa3.45□□□□□ -1.86
NUP88-212ENST00000576708 SERP1Q9Y6X1 66 aa3.45□□□□□ -1.86
NUP88-212ENST00000576708 LOC107984156A0A0G2JMH3 177 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms