RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 NHP2Q9NX24 153 aaKnown RBP6.09□□□□□ -1.43
CTNS-208ENST00000574218 MT2AP02795 61 aa6.08□□□□□ -1.44
CTNS-208ENST00000574218 FABP4P15090 132 aa6.08□□□□□ -1.44
CTNS-208ENST00000574218 Q96NJ1 140 aa6.08□□□□□ -1.44
CTNS-208ENST00000574218 A4D1N5 150 aa6.06□□□□□ -1.44
CTNS-208ENST00000574218 KRTAP10-10P60014 251 aa6.06□□□□□ -1.44
CTNS-208ENST00000574218 LITAFQ99732 161 aa6.06□□□□□ -1.44
CTNS-208ENST00000574218 A6NDN8 102 aa6.05□□□□□ -1.44
CTNS-208ENST00000574218 SNAPINO95295 136 aa6.05□□□□□ -1.44
CTNS-208ENST00000574218 APOC3P02656 99 aa6.05□□□□□ -1.44
CTNS-208ENST00000574218 SVBPQ8N300 66 aa6.05□□□□□ -1.44
CTNS-208ENST00000574218 KRTAP4-9Q9BYQ8 210 aa6.05□□□□□ -1.44
CTNS-208ENST00000574218 SYNE2Q8WXH0 6885 aaKnown RBP6.05□□□□□ -1.44
CTNS-208ENST00000574218 MACF1Q9UPN3 7388 aaKnown RBP6.05□□□□□ -1.44
CTNS-208ENST00000574218 TRBV7-7A0A0K0K1E9 115 aa6.04□□□□□ -1.44
CTNS-208ENST00000574218 ZNF815PA8K554 130 aa6.04□□□□□ -1.44
CTNS-208ENST00000574218 SERF1AO75920 110 aa6.04□□□□□ -1.44
CTNS-208ENST00000574218 Q6JHZ5 121 aa6.04□□□□□ -1.44
CTNS-208ENST00000574218 COPS9Q8WXC6 57 aa6.04□□□□□ -1.44
CTNS-208ENST00000574218 CLEC2BQ92478 149 aa6.03□□□□□ -1.44
CTNS-208ENST00000574218 LST1O00453 97 aa6.02□□□□□ -1.45
CTNS-208ENST00000574218 MT1FP04733 61 aa6.02□□□□□ -1.45
CTNS-208ENST00000574218 IGFL1Q6UW32 110 aa6.02□□□□□ -1.45
CTNS-208ENST00000574218 TRAV13-2A0A0B4J235 113 aa6.01□□□□□ -1.45
CTNS-208ENST00000574218 SMIM6P0DI80 62 aa6.01□□□□□ -1.45
CTNS-208ENST00000574218 ANKRD39Q53RE8 183 aa6.01□□□□□ -1.45
CTNS-208ENST00000574218 C20orf166-AS1Q96NR2 134 aa6□□□□□ -1.45
CTNS-208ENST00000574218 KRTAP9-3Q9BYQ3 159 aa6□□□□□ -1.45
CTNS-208ENST00000574218 RBM12B-AS1Q9P1G2 102 aa6□□□□□ -1.45
CTNS-208ENST00000574218 SCGB1D4Q6XE38 83 aa5.99□□□□□ -1.45
CTNS-208ENST00000574218 A8MUU9 505 aa5.98□□□□□ -1.45
CTNS-208ENST00000574218 TRGC2P03986 189 aa5.98□□□□□ -1.45
CTNS-208ENST00000574218 VAMP3Q15836 100 aa5.98□□□□□ -1.45
CTNS-208ENST00000574218 YPEL4Q96NS1 127 aa5.97□□□□□ -1.45
CTNS-208ENST00000574218 SS18L2Q9UHA2 77 aa5.97□□□□□ -1.45
CTNS-208ENST00000574218 IFITM1P13164 125 aa5.96□□□□□ -1.46
CTNS-208ENST00000574218 C12orf57Q99622 126 aa5.96□□□□□ -1.46
CTNS-208ENST00000574218 OCIAD2Q56VL3 154 aa5.95□□□□□ -1.46
CTNS-208ENST00000574218 SMIM11BQ8TCY0 68 aa5.95□□□□□ -1.46
CTNS-208ENST00000574218 SYS1-DBNDD2H3BUS1 97 aa5.94□□□□□ -1.46
CTNS-208ENST00000574218 KRTAP19-6Q3LI70 58 aa5.94□□□□□ -1.46
CTNS-208ENST00000574218 Q6ZQY7 126 aa5.94□□□□□ -1.46
CTNS-208ENST00000574218 TTTY13Q9BZ97 58 aa5.94□□□□□ -1.46
CTNS-208ENST00000574218 hADV29S1A0JD25 119 aa5.93□□□□□ -1.46
CTNS-208ENST00000574218 Q6ZVH6 145 aa5.93□□□□□ -1.46
CTNS-208ENST00000574218 SCGB1D1O95968 90 aa5.92□□□□□ -1.46
CTNS-208ENST00000574218 KRTAP6-3Q3LI67 103 aa5.92□□□□□ -1.46
CTNS-208ENST00000574218 S100A6P06703 90 aa5.91□□□□□ -1.46
CTNS-208ENST00000574218 LINC00575Q6W349 94 aa5.91□□□□□ -1.46
CTNS-208ENST00000574218 MUSTN1Q8IVN3 82 aa5.91□□□□□ -1.46
CTNS-208ENST00000574218 SNHG12Q9BXW3 62 aa5.91□□□□□ -1.46
CTNS-208ENST00000574218 COLCA2A8K830 154 aa5.9□□□□□ -1.46
CTNS-208ENST00000574218 DSCR10P59022 87 aa5.9□□□□□ -1.46
CTNS-208ENST00000574218 MTURNQ8N3F0 131 aa5.9□□□□□ -1.46
CTNS-208ENST00000574218 LINC01545Q5VT33 79 aa5.89□□□□□ -1.47
CTNS-208ENST00000574218 PET117Q6UWS5 81 aa5.89□□□□□ -1.47
CTNS-208ENST00000574218 PPDPFLQ8WWR9 84 aa5.88□□□□□ -1.47
CTNS-208ENST00000574218 KRTAP4-2Q9BYR5 136 aa5.88□□□□□ -1.47
CTNS-208ENST00000574218 PCP4L1A6NKN8 68 aa5.87□□□□□ -1.47
CTNS-208ENST00000574218 H3BUT2 72 aa5.87□□□□□ -1.47
CTNS-208ENST00000574218 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.87□□□□□ -1.47
CTNS-208ENST00000574218 SIGMAR1Q99720 223 aa5.86□□□□□ -1.47
CTNS-208ENST00000574218 HRES1P13985 223 aa5.85□□□□□ -1.47
CTNS-208ENST00000574218 LCE5AQ5TCM9 118 aa5.85□□□□□ -1.47
CTNS-208ENST00000574218 LINC00313P59037 77 aa5.84□□□□□ -1.47
CTNS-208ENST00000574218 TEN1Q86WV5 123 aa5.84□□□□□ -1.47
CTNS-208ENST00000574218 MPLKIPQ8TAP9 179 aa5.84□□□□□ -1.47
CTNS-208ENST00000574218 KRTAP4-11Q9BYQ6 195 aa5.84□□□□□ -1.47
CTNS-208ENST00000574218 A0A087WSZ3 146 aa5.83□□□□□ -1.48
CTNS-208ENST00000574218 SNRPEP62304 92 aaKnown RBP5.83□□□□□ -1.48
CTNS-208ENST00000574218 KRTAP16-1A8MUX0 517 aa5.82□□□□□ -1.48
CTNS-208ENST00000574218 S100A2P29034 98 aa5.82□□□□□ -1.48
CTNS-208ENST00000574218 A8MWP4 228 aa5.8□□□□□ -1.48
CTNS-208ENST00000574218 SNCGO76070 127 aa5.8□□□□□ -1.48
CTNS-208ENST00000574218 C3orf79P0CE67 100 aa5.8□□□□□ -1.48
CTNS-208ENST00000574218 KRTDAPP60985 99 aa5.8□□□□□ -1.48
CTNS-208ENST00000574218 BVES-AS1Q5T3Y7 98 aa5.8□□□□□ -1.48
CTNS-208ENST00000574218 NOTCH2NLQ7Z3S9 236 aa5.79□□□□□ -1.48
CTNS-208ENST00000574218 TSTD3H0UI37 97 aa5.78□□□□□ -1.48
CTNS-208ENST00000574218 IGKV4-1P06312 121 aa5.77□□□□□ -1.49
CTNS-208ENST00000574218 COA6Q5JTJ3 125 aaKnown RBP5.77□□□□□ -1.49
CTNS-208ENST00000574218 Q8N9P0 234 aaPredicted RBP5.76□□□□□ -1.49
CTNS-208ENST00000574218 ATOH7Q8N100 152 aa5.75□□□□□ -1.49
CTNS-208ENST00000574218 NDUFV3P56181 108 aaKnown RBP5.74□□□□□ -1.49
CTNS-208ENST00000574218 HIST3H2BBQ8N257 126 aa5.74□□□□□ -1.49
CTNS-208ENST00000574218 H3BMG7 143 aa5.73□□□□□ -1.49
CTNS-208ENST00000574218 HIST1H2BKO60814 126 aa5.73□□□□□ -1.49
CTNS-208ENST00000574218 HIST1H2BJP06899 126 aa5.73□□□□□ -1.49
CTNS-208ENST00000574218 HIST1H2BOP23527 126 aa5.73□□□□□ -1.49
CTNS-208ENST00000574218 HIST1H2BBP33778 126 aa5.73□□□□□ -1.49
CTNS-208ENST00000574218 HIST1H2BDP58876 126 aa5.73□□□□□ -1.49
CTNS-208ENST00000574218 HIST1H2BCP62807 126 aa5.73□□□□□ -1.49
CTNS-208ENST00000574218 HIST2H2BEQ16778 126 aa5.73□□□□□ -1.49
CTNS-208ENST00000574218 PYY3Q5JQD4 70 aa5.73□□□□□ -1.49
CTNS-208ENST00000574218 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.73□□□□□ -1.49
CTNS-208ENST00000574218 HIST1H2BHQ93079 126 aa5.73□□□□□ -1.49
CTNS-208ENST00000574218 HIST1H2BNQ99877 126 aa5.73□□□□□ -1.49
CTNS-208ENST00000574218 HIST1H2BMQ99879 126 aa5.73□□□□□ -1.49
CTNS-208ENST00000574218 NEBP20929 6669 aa5.72□□□□□ -1.49
CTNS-208ENST00000574218 IGHV6-1A0A0B4J1U7 121 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 635.4 ms