RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 KRTAP19-2Q3LHN2 52 aa6.1□□□□□ -1.43
RPAIN-214ENST00000574003 F8WEM9 126 aa6.09□□□□□ -1.43
RPAIN-214ENST00000574003 C14orf144Q96I85 54 aa6.09□□□□□ -1.43
RPAIN-214ENST00000574003 IGFL1Q6UW32 110 aa6.08□□□□□ -1.44
RPAIN-214ENST00000574003 PAM16Q9Y3D7 125 aa6.07□□□□□ -1.44
RPAIN-214ENST00000574003 H3BUT2 72 aa6.06□□□□□ -1.44
RPAIN-214ENST00000574003 CFC1BP0CG36 223 aa6.06□□□□□ -1.44
RPAIN-214ENST00000574003 CFC1P0CG37 223 aa6.06□□□□□ -1.44
RPAIN-214ENST00000574003 SPATA45Q537H7 98 aa6.06□□□□□ -1.44
RPAIN-214ENST00000574003 OCIAD2Q56VL3 154 aa6.06□□□□□ -1.44
RPAIN-214ENST00000574003 TRBV7-7A0A0K0K1E9 115 aa6.05□□□□□ -1.44
RPAIN-214ENST00000574003 TCL1BO95988 128 aa6.05□□□□□ -1.44
RPAIN-214ENST00000574003 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.05□□□□□ -1.44
RPAIN-214ENST00000574003 CLEC2BQ92478 149 aa6.05□□□□□ -1.44
RPAIN-214ENST00000574003 DLEU1O43261 78 aa6.04□□□□□ -1.44
RPAIN-214ENST00000574003 RPL37P61927 97 aaKnown RBP6.04□□□□□ -1.44
RPAIN-214ENST00000574003 MT1HP80294 61 aa6.04□□□□□ -1.44
RPAIN-214ENST00000574003 C2orf91Q6ZV80 131 aa6.04□□□□□ -1.44
RPAIN-214ENST00000574003 FAM218AQ96MZ4 157 aa6.04□□□□□ -1.44
RPAIN-214ENST00000574003 BVES-AS1Q5T3Y7 98 aa6.03□□□□□ -1.44
RPAIN-214ENST00000574003 Q6JHZ5 121 aa6.03□□□□□ -1.44
RPAIN-214ENST00000574003 RAB37Q96AX2 223 aa6.03□□□□□ -1.44
RPAIN-214ENST00000574003 SNHG12Q9BXW3 62 aa6.03□□□□□ -1.44
RPAIN-214ENST00000574003 VAMP8Q9BV40 100 aa6.01□□□□□ -1.45
RPAIN-214ENST00000574003 A0A0B4J2C4 111 aa6□□□□□ -1.45
RPAIN-214ENST00000574003 KRTAP9-6A0A140TA67 174 aa6□□□□□ -1.45
RPAIN-214ENST00000574003 HIGD1BQ9P298 99 aa6□□□□□ -1.45
RPAIN-214ENST00000574003 FXYD2P54710 66 aa5.99□□□□□ -1.45
RPAIN-214ENST00000574003 OBSCN-AS1Q96MR7 158 aa5.99□□□□□ -1.45
RPAIN-214ENST00000574003 CEND1Q8N111 149 aa5.98□□□□□ -1.45
RPAIN-214ENST00000574003 FLGP20930 4061 aaPredicted RBP5.98□□□□□ -1.45
RPAIN-214ENST00000574003 PPDPFLQ8WWR9 84 aa5.97□□□□□ -1.45
RPAIN-214ENST00000574003 H0YGX0 51 aa5.96□□□□□ -1.46
RPAIN-214ENST00000574003 LST1O00453 97 aa5.96□□□□□ -1.46
RPAIN-214ENST00000574003 NDUFV3P56181 108 aaKnown RBP5.96□□□□□ -1.46
RPAIN-214ENST00000574003 LCE2DQ5TA82 110 aaPredicted RBP5.95□□□□□ -1.46
RPAIN-214ENST00000574003 A0A1B0GV72 72 aa5.94□□□□□ -1.46
RPAIN-214ENST00000574003 TRIAP1O43715 76 aa5.94□□□□□ -1.46
RPAIN-214ENST00000574003 FABP2P12104 132 aa5.94□□□□□ -1.46
RPAIN-214ENST00000574003 PRO1854Q9UHT4 67 aa5.94□□□□□ -1.46
RPAIN-214ENST00000574003 A0A087WSZ3 146 aa5.93□□□□□ -1.46
RPAIN-214ENST00000574003 K7ERJ3 54 aa5.93□□□□□ -1.46
RPAIN-214ENST00000574003 PYY3Q5JQD4 70 aa5.93□□□□□ -1.46
RPAIN-214ENST00000574003 H3BMG7 143 aa5.92□□□□□ -1.46
RPAIN-214ENST00000574003 KRTAP10-6P60371 365 aaPredicted RBP5.92□□□□□ -1.46
RPAIN-214ENST00000574003 COX6B2Q6YFQ2 88 aa5.92□□□□□ -1.46
RPAIN-214ENST00000574003 Q96NJ1 140 aa5.92□□□□□ -1.46
RPAIN-214ENST00000574003 FSIP2Q5CZC0 6907 aa5.91□□□□□ -1.46
RPAIN-214ENST00000574003 SNCGO76070 127 aa5.91□□□□□ -1.46
RPAIN-214ENST00000574003 Q6Q795 121 aa5.91□□□□□ -1.46
RPAIN-214ENST00000574003 Q75L30 129 aa5.91□□□□□ -1.46
RPAIN-214ENST00000574003 TEN1Q86WV5 123 aa5.91□□□□□ -1.46
RPAIN-214ENST00000574003 TMEM238LA0A1B0GVL6 79 aa5.9□□□□□ -1.46
RPAIN-214ENST00000574003 A0A1W2PNM2 257 aa5.9□□□□□ -1.46
RPAIN-214ENST00000574003 A6NJY4 79 aa5.9□□□□□ -1.46
RPAIN-214ENST00000574003 M0R2T5 61 aa5.9□□□□□ -1.46
RPAIN-214ENST00000574003 LORP23490 312 aaPredicted RBP5.9□□□□□ -1.46
RPAIN-214ENST00000574003 DSCR10P59022 87 aa5.89□□□□□ -1.47
RPAIN-214ENST00000574003 ATP11AUNQ6ZP68 121 aa5.89□□□□□ -1.47
RPAIN-214ENST00000574003 SS18L2Q9UHA2 77 aa5.89□□□□□ -1.47
RPAIN-214ENST00000574003 TMA7Q9Y2S6 64 aaKnown RBP5.89□□□□□ -1.47
RPAIN-214ENST00000574003 A0A1B0GX51 115 aa5.88□□□□□ -1.47
RPAIN-214ENST00000574003 HSD52Q0P140 79 aa5.88□□□□□ -1.47
RPAIN-214ENST00000574003 PSMB2P49721 201 aa5.87□□□□□ -1.47
RPAIN-214ENST00000574003 A8MUU9 505 aa5.85□□□□□ -1.47
RPAIN-214ENST00000574003 C20orf166-AS1Q96NR2 134 aa5.85□□□□□ -1.47
RPAIN-214ENST00000574003 SIGMAR1Q99720 223 aa5.85□□□□□ -1.47
RPAIN-214ENST00000574003 ORMDL1Q9P0S3 153 aa5.85□□□□□ -1.47
RPAIN-214ENST00000574003 DNAL4O96015 105 aa5.84□□□□□ -1.47
RPAIN-214ENST00000574003 DEFB116Q30KQ4 102 aa5.84□□□□□ -1.47
RPAIN-214ENST00000574003 ANKRD29Q8N6D5 301 aa5.84□□□□□ -1.47
RPAIN-214ENST00000574003 CRCT1Q9UGL9 99 aa5.84□□□□□ -1.47
RPAIN-214ENST00000574003 NOTCH2NLQ7Z3S9 236 aa5.83□□□□□ -1.48
RPAIN-214ENST00000574003 IGKV4-1P06312 121 aa5.82□□□□□ -1.48
RPAIN-214ENST00000574003 KRTAP16-1A8MUX0 517 aa5.81□□□□□ -1.48
RPAIN-214ENST00000574003 GHRHP01286 108 aa5.81□□□□□ -1.48
RPAIN-214ENST00000574003 UQCR10Q9UDW1 63 aa5.81□□□□□ -1.48
RPAIN-214ENST00000574003 TRBV7-4A0A0J9YYF1 115 aa5.79□□□□□ -1.48
RPAIN-214ENST00000574003 TMEM256-PLSCR3K7ERE1 68 aa5.79□□□□□ -1.48
RPAIN-214ENST00000574003 CCKP06307 115 aa5.79□□□□□ -1.48
RPAIN-214ENST00000574003 COX6CP09669 75 aa5.79□□□□□ -1.48
RPAIN-214ENST00000574003 LINC00313P59037 77 aa5.78□□□□□ -1.48
RPAIN-214ENST00000574003 LINC00472Q9H8W2 130 aa5.78□□□□□ -1.48
RPAIN-214ENST00000574003 TRACP01848 142 aa5.77□□□□□ -1.49
RPAIN-214ENST00000574003 SCGB1C2P0DMR2 95 aa5.77□□□□□ -1.49
RPAIN-214ENST00000574003 VPS25Q9BRG1 176 aa5.77□□□□□ -1.49
RPAIN-214ENST00000574003 IGHV6-1A0A0B4J1U7 121 aa5.76□□□□□ -1.49
RPAIN-214ENST00000574003 UBE2V1Q13404 147 aa5.76□□□□□ -1.49
RPAIN-214ENST00000574003 NAA38Q9BRA0 125 aaKnown RBP5.76□□□□□ -1.49
RPAIN-214ENST00000574003 H3BQ85 93 aa5.75□□□□□ -1.49
RPAIN-214ENST00000574003 BAALC-AS2P0C853 105 aa5.73□□□□□ -1.49
RPAIN-214ENST00000574003 RBM3P98179 157 aaKnown RBP5.72□□□□□ -1.49
RPAIN-214ENST00000574003 TRBV20-1A0A075B6N2 111 aa5.71□□□□□ -1.5
RPAIN-214ENST00000574003 HRES1P13985 223 aa5.7□□□□□ -1.5
RPAIN-214ENST00000574003 DSCR8Q96T75 97 aa5.7□□□□□ -1.5
RPAIN-214ENST00000574003 KRTAP9-8Q9BYQ0 159 aa5.7□□□□□ -1.5
RPAIN-214ENST00000574003 A0A1B0GVX0 72 aa5.69□□□□□ -1.5
RPAIN-214ENST00000574003 FAM236DA0A1B0GTK5 79 aa5.68□□□□□ -1.5
RPAIN-214ENST00000574003 FAM236CP0DP71 79 aa5.68□□□□□ -1.5
RPAIN-214ENST00000574003 C9JAW5 83 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms