RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 IGLV8-61A0A075B6I0 122 aa9.81□□□□□ -0.84
NUP88-207ENST00000573584 WFDC13Q8IUB5 93 aa9.81□□□□□ -0.84
NUP88-207ENST00000573584 KRTAP1-5Q9BYS1 174 aa9.81□□□□□ -0.84
NUP88-207ENST00000573584 hDV103S1A0JD37 113 aa9.8□□□□□ -0.84
NUP88-207ENST00000573584 UBE2AP49459 152 aa9.8□□□□□ -0.84
NUP88-207ENST00000573584 CNBPP62633 177 aaKnown RBP9.8□□□□□ -0.84
NUP88-207ENST00000573584 COL6A5A8TX70 2615 aa9.79□□□□□ -0.84
NUP88-207ENST00000573584 C1orf64Q8NEQ6 169 aa9.79□□□□□ -0.84
NUP88-207ENST00000573584 BRK1Q8WUW1 75 aa9.78□□□□□ -0.84
NUP88-207ENST00000573584 K7EIL1 84 aa9.78□□□□□ -0.84
NUP88-207ENST00000573584 LRCOL1A6NCL2 159 aa9.77□□□□□ -0.84
NUP88-207ENST00000573584 RPL37AP61513 92 aaKnown RBP9.77□□□□□ -0.84
NUP88-207ENST00000573584 LYSTQ99698 3801 aa9.77□□□□□ -0.85
NUP88-207ENST00000573584 SRRM2Q9UQ35 2752 aaKnown RBP9.77□□□□□ -0.85
NUP88-207ENST00000573584 PHF5AQ7RTV0 110 aaKnown RBP9.75□□□□□ -0.85
NUP88-207ENST00000573584 CHTF8P0CG12 524 aa9.75□□□□□ -0.85
NUP88-207ENST00000573584 PRR4Q16378 134 aa9.75□□□□□ -0.85
NUP88-207ENST00000573584 KRTAP11-1Q8IUC1 163 aa9.75□□□□□ -0.85
NUP88-207ENST00000573584 MP68P56378 58 aa9.74□□□□□ -0.85
NUP88-207ENST00000573584 NDUFB1O75438 58 aa9.72□□□□□ -0.85
NUP88-207ENST00000573584 DNAH9Q9NYC9 4486 aa9.72□□□□□ -0.85
NUP88-207ENST00000573584 KRTAP29-1A8MX34 341 aaPredicted RBP9.71□□□□□ -0.85
NUP88-207ENST00000573584 CYP4F30PQ9H0H9 118 aa9.71□□□□□ -0.85
NUP88-207ENST00000573584 UBE2DNLQ8IWF7 75 aa9.71□□□□□ -0.86
NUP88-207ENST00000573584 SPRR1BP22528 89 aa9.7□□□□□ -0.86
NUP88-207ENST00000573584 LINC00208Q96KT6 92 aa9.7□□□□□ -0.86
NUP88-207ENST00000573584 H0Y9J4 135 aa9.69□□□□□ -0.86
NUP88-207ENST00000573584 CASC2Q6XLA1 102 aa9.69□□□□□ -0.86
NUP88-207ENST00000573584 C14orf177Q52M58 125 aa9.69□□□□□ -0.86
NUP88-207ENST00000573584 PRR15Q8IV56 129 aa9.69□□□□□ -0.86
NUP88-207ENST00000573584 TRAV22A0A0B4J277 110 aa9.68□□□□□ -0.86
NUP88-207ENST00000573584 Q1T7F1 81 aa9.68□□□□□ -0.86
NUP88-207ENST00000573584 PKIGQ9Y2B9 76 aa9.68□□□□□ -0.86
NUP88-207ENST00000573584 STAB2Q8WWQ8 2551 aa9.67□□□□□ -0.86
NUP88-207ENST00000573584 A8MWP4 228 aa9.67□□□□□ -0.86
NUP88-207ENST00000573584 LINC00472Q9H8W2 130 aa9.67□□□□□ -0.86
NUP88-207ENST00000573584 CSMD3Q7Z407 3707 aa9.66□□□□□ -0.86
NUP88-207ENST00000573584 H0Y9P7 68 aa9.65□□□□□ -0.87
NUP88-207ENST00000573584 B9D2Q9BPU9 175 aa9.65□□□□□ -0.87
NUP88-207ENST00000573584 COL7A1Q02388 2944 aa9.64□□□□□ -0.87
NUP88-207ENST00000573584 C9orf163Q8N9P6 203 aa9.64□□□□□ -0.87
NUP88-207ENST00000573584 APLNQ9ULZ1 77 aa9.63□□□□□ -0.87
NUP88-207ENST00000573584 MGAM2Q2M2H8 2515 aa9.63□□□□□ -0.87
NUP88-207ENST00000573584 TENM2Q9NT68 2774 aa9.62□□□□□ -0.87
NUP88-207ENST00000573584 H3BPC8 53 aa9.61□□□□□ -0.87
NUP88-207ENST00000573584 PSPHP1O15172 72 aa9.6□□□□□ -0.87
NUP88-207ENST00000573584 PANO1I0J062 215 aa9.58□□□□□ -0.88
NUP88-207ENST00000573584 SPANXA2-OT1Q8N9U9 137 aa9.58□□□□□ -0.88
NUP88-207ENST00000573584 DNAH7Q8WXX0 4024 aa9.57□□□□□ -0.88
NUP88-207ENST00000573584 KRTAP13-1Q8IUC0 172 aa9.56□□□□□ -0.88
NUP88-207ENST00000573584 MMP24-AS1A0A0U1RRL7 71 aa9.55□□□□□ -0.88
NUP88-207ENST00000573584 IGLV9-49A0A0B4J1Y8 123 aa9.54□□□□□ -0.88
NUP88-207ENST00000573584 NBDYA0A0U1RRE5 68 aa9.53□□□□□ -0.88
NUP88-207ENST00000573584 C1orf195Q5TG92 126 aa9.52□□□□□ -0.88
NUP88-207ENST00000573584 V9GYY9 64 aa9.52□□□□□ -0.88
NUP88-207ENST00000573584 A8MUN3 132 aa9.51□□□□□ -0.89
NUP88-207ENST00000573584 DYNC2H1Q8NCM8 4307 aaKnown RBP9.5□□□□□ -0.89
NUP88-207ENST00000573584 PLECQ15149 4684 aaKnown RBP9.5□□□□□ -0.89
NUP88-207ENST00000573584 Q6ZRN7 208 aaPredicted RBP9.49□□□□□ -0.89
NUP88-207ENST00000573584 Q96NJ1 140 aa9.49□□□□□ -0.89
NUP88-207ENST00000573584 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.49□□□□□ -0.89
NUP88-207ENST00000573584 MDFIQ99750 246 aa9.48□□□□□ -0.89
NUP88-207ENST00000573584 SPACA4Q8TDM5 124 aa9.47□□□□□ -0.89
NUP88-207ENST00000573584 Q8N9P0 234 aaPredicted RBP9.45□□□□□ -0.9
NUP88-207ENST00000573584 ASB16-AS1Q495Z4 193 aa9.44□□□□□ -0.9
NUP88-207ENST00000573584 TP53AIP1Q9HCN2 124 aa9.44□□□□□ -0.9
NUP88-207ENST00000573584 IGLV7-46A0A075B6I9 117 aa9.44□□□□□ -0.9
NUP88-207ENST00000573584 MOBPQ13875 183 aa9.44□□□□□ -0.9
NUP88-207ENST00000573584 LINC00483Q53H64 154 aa9.43□□□□□ -0.9
NUP88-207ENST00000573584 Q5VV11 94 aa9.43□□□□□ -0.9
NUP88-207ENST00000573584 C8orf17Q9NRJ1 99 aa9.43□□□□□ -0.9
NUP88-207ENST00000573584 PCOTHQ58A44 107 aa9.43□□□□□ -0.9
NUP88-207ENST00000573584 LIMD2Q9BT23 127 aa9.42□□□□□ -0.9
NUP88-207ENST00000573584 IGHV6-1A0A0B4J1U7 121 aa9.41□□□□□ -0.9
NUP88-207ENST00000573584 COA5Q86WW8 74 aa9.41□□□□□ -0.9
NUP88-207ENST00000573584 NUPR2A6NF83 97 aa9.4□□□□□ -0.9
NUP88-207ENST00000573584 ZNF706Q9Y5V0 76 aaPredicted RBP9.4□□□□□ -0.9
NUP88-207ENST00000573584 NDUFS5O43920 106 aa9.39□□□□□ -0.91
NUP88-207ENST00000573584 WWC2-AS2Q96NR7 200 aa9.39□□□□□ -0.91
NUP88-207ENST00000573584 A0A1B0GVX0 72 aa9.39□□□□□ -0.91
NUP88-207ENST00000573584 CDK2AP2O75956 126 aa9.38□□□□□ -0.91
NUP88-207ENST00000573584 CD164Q04900 197 aa9.38□□□□□ -0.91
NUP88-207ENST00000573584 ANAPC11Q9NYG5 84 aa9.38□□□□□ -0.91
NUP88-207ENST00000573584 Q6ZR54 194 aa9.38□□□□□ -0.91
NUP88-207ENST00000573584 PRR15LQ9BU68 103 aa9.38□□□□□ -0.91
NUP88-207ENST00000573584 PSORS1C2Q9UIG4 136 aa9.38□□□□□ -0.91
NUP88-207ENST00000573584 CHKB-CPT1BH3BT56 60 aa9.37□□□□□ -0.91
NUP88-207ENST00000573584 A0A087WTM6 91 aa9.37□□□□□ -0.91
NUP88-207ENST00000573584 IGLV5-52A0A0A0MRZ9 124 aa9.35□□□□□ -0.91
NUP88-207ENST00000573584 A8MU10 97 aa9.35□□□□□ -0.91
NUP88-207ENST00000573584 MRPL34Q9BQ48 92 aaKnown RBP9.34□□□□□ -0.91
NUP88-207ENST00000573584 HECTD4Q9Y4D8 3996 aa9.33□□□□□ -0.92
NUP88-207ENST00000573584 RTL8CO15255 209 aa9.33□□□□□ -0.92
NUP88-207ENST00000573584 ZNF861PO60384 105 aa9.32□□□□□ -0.92
NUP88-207ENST00000573584 A0A087X002 238 aa9.32□□□□□ -0.92
NUP88-207ENST00000573584 NOTCH2NLQ7Z3S9 236 aa9.32□□□□□ -0.92
NUP88-207ENST00000573584 FRAS1Q86XX4 4008 aa9.32□□□□□ -0.92
NUP88-207ENST00000573584 DNAH8Q96JB1 4490 aa9.31□□□□□ -0.92
NUP88-207ENST00000573584 VPS13DQ5THJ4 4388 aa9.31□□□□□ -0.92
NUP88-207ENST00000573584 STARD9Q9P2P6 4700 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms