RNA–Protein interactions for RNA: ENST00000572845.1

TVP23B-205, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 483 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-205ENST00000572845 DEFB105AQ8NG35 78 aa1.28□□□□□ -2.2
TVP23B-205ENST00000572845 M0QY20 66 aa1.27□□□□□ -2.21
TVP23B-205ENST00000572845 WT1-ASQ06250 92 aa1.27□□□□□ -2.21
TVP23B-205ENST00000572845 PCNX1Q96RV3 2341 aa1.26□□□□□ -2.21
TVP23B-205ENST00000572845 Q5VSD8 79 aa1.26□□□□□ -2.21
TVP23B-205ENST00000572845 PKDREJQ9NTG1 2253 aa1.26□□□□□ -2.21
TVP23B-205ENST00000572845 SPRR1BP22528 89 aa1.25□□□□□ -2.21
TVP23B-205ENST00000572845 KLK9Q2XQG4 91 aa1.25□□□□□ -2.21
TVP23B-205ENST00000572845 USF3Q68DE3 2245 aa1.24□□□□□ -2.21
TVP23B-205ENST00000572845 A8MTW9 85 aa1.24□□□□□ -2.21
TVP23B-205ENST00000572845 PRLHP81277 87 aa1.24□□□□□ -2.21
TVP23B-205ENST00000572845 DEFB104AQ8WTQ1 72 aa1.24□□□□□ -2.21
TVP23B-205ENST00000572845 TOMM7Q9P0U1 55 aa1.24□□□□□ -2.21
TVP23B-205ENST00000572845 ROS1P08922 2347 aa1.23□□□□□ -2.21
TVP23B-205ENST00000572845 H3BUA1 57 aa1.23□□□□□ -2.21
TVP23B-205ENST00000572845 KRTAP6-3Q3LI67 103 aa1.23□□□□□ -2.21
TVP23B-205ENST00000572845 C2CD3Q4AC94 2353 aa1.23□□□□□ -2.21
TVP23B-205ENST00000572845 CLPSL2Q6UWE3 100 aa1.22□□□□□ -2.21
TVP23B-205ENST00000572845 S4R3F8 94 aa1.22□□□□□ -2.21
TVP23B-205ENST00000572845 FCGBPQ9Y6R7 5405 aaPredicted RBP1.22□□□□□ -2.21
TVP23B-205ENST00000572845 DEFB106AQ8N104 65 aa1.21□□□□□ -2.22
TVP23B-205ENST00000572845 CSPG4Q6UVK1 2322 aa1.2□□□□□ -2.22
TVP23B-205ENST00000572845 MUC6Q6W4X9 2439 aa1.19□□□□□ -2.22
TVP23B-205ENST00000572845 SPTBN1Q01082 2364 aaKnown RBP1.19□□□□□ -2.22
TVP23B-205ENST00000572845 DEFB109BQ30KR1 87 aa1.19□□□□□ -2.22
TVP23B-205ENST00000572845 DEFB119Q8N690 84 aa1.19□□□□□ -2.22
TVP23B-205ENST00000572845 TMEM167AQ8TBQ9 72 aa1.19□□□□□ -2.22
TVP23B-205ENST00000572845 SPTBN2O15020 2390 aa1.19□□□□□ -2.22
TVP23B-205ENST00000572845 GVINP1Q7Z2Y8 2422 aa1.18□□□□□ -2.22
TVP23B-205ENST00000572845 A0A0D9SG42 100 aa1.18□□□□□ -2.22
TVP23B-205ENST00000572845 ABCA2Q9BZC7 2435 aa1.18□□□□□ -2.22
TVP23B-205ENST00000572845 F8P00451 2351 aa1.18□□□□□ -2.22
TVP23B-205ENST00000572845 SPINK1P00995 79 aa1.17□□□□□ -2.22
TVP23B-205ENST00000572845 RPL39P5Q59GN2 51 aa1.17□□□□□ -2.22
TVP23B-205ENST00000572845 FBN3Q75N90 2809 aa1.17□□□□□ -2.22
TVP23B-205ENST00000572845 K7EIM0 57 aa1.16□□□□□ -2.22
TVP23B-205ENST00000572845 CACNA1HO95180 2353 aa1.16□□□□□ -2.22
TVP23B-205ENST00000572845 DSPP15924 2871 aaKnown RBP1.16□□□□□ -2.22
TVP23B-205ENST00000572845 ABCA12Q86UK0 2595 aa1.15□□□□□ -2.22
TVP23B-205ENST00000572845 CEP290O15078 2479 aa1.13□□□□□ -2.23
TVP23B-205ENST00000572845 DEFB108AA8MXU0 73 aa1.13□□□□□ -2.23
TVP23B-205ENST00000572845 NOP10Q9NPE3 64 aaKnown RBP1.13□□□□□ -2.23
TVP23B-205ENST00000572845 AKAP6Q13023 2319 aa1.12□□□□□ -2.23
TVP23B-205ENST00000572845 WNK1Q9H4A3 2382 aa1.12□□□□□ -2.23
TVP23B-205ENST00000572845 POLQO75417 2590 aa1.11□□□□□ -2.23
TVP23B-205ENST00000572845 TTC28Q96AY4 2481 aa1.11□□□□□ -2.23
TVP23B-205ENST00000572845 CELSR2Q9HCU4 2923 aa1.11□□□□□ -2.23
TVP23B-205ENST00000572845 REV3LO60673 3130 aa1.1□□□□□ -2.23
TVP23B-205ENST00000572845 J3QKU1 62 aa1.1□□□□□ -2.23
TVP23B-205ENST00000572845 ZNF292O60281 2723 aa1.1□□□□□ -2.23
TVP23B-205ENST00000572845 RP1L1Q8IWN7 2480 aaPredicted RBP1.08□□□□□ -2.24
TVP23B-205ENST00000572845 SPTA1P02549 2419 aa1.08□□□□□ -2.24
TVP23B-205ENST00000572845 TRANK1O15050 2925 aa1.08□□□□□ -2.24
TVP23B-205ENST00000572845 MEGF8Q7Z7M0 2845 aa1.07□□□□□ -2.24
TVP23B-205ENST00000572845 PKD1L2Q7Z442 2459 aa1.07□□□□□ -2.24
TVP23B-205ENST00000572845 ACACAQ13085 2346 aa1.06□□□□□ -2.24
TVP23B-205ENST00000572845 EP300Q09472 2414 aaPredicted RBP1.06□□□□□ -2.24
TVP23B-205ENST00000572845 HECTD1Q9ULT8 2610 aa1.05□□□□□ -2.24
TVP23B-205ENST00000572845 KRTAP10-4P60372 401 aaPredicted RBP1.05□□□□□ -2.24
TVP23B-205ENST00000572845 ASH1LQ9NR48 2969 aaKnown RBP1.05□□□□□ -2.24
TVP23B-205ENST00000572845 APELAP0DMC3 54 aa1.04□□□□□ -2.24
TVP23B-205ENST00000572845 SPTBN4Q9H254 2564 aa1.03□□□□□ -2.24
TVP23B-205ENST00000572845 PRRC2CQ9Y520 2896 aaKnown RBP1.03□□□□□ -2.24
TVP23B-205ENST00000572845 CCDC168Q8NDH2 2452 aa1.03□□□□□ -2.25
TVP23B-205ENST00000572845 STATHP02808 62 aa1.02□□□□□ -2.25
TVP23B-205ENST00000572845 TENM1Q9UKZ4 2725 aa1.02□□□□□ -2.25
TVP23B-205ENST00000572845 ATRQ13535 2644 aa1.02□□□□□ -2.25
TVP23B-205ENST00000572845 NCOR1O75376 2440 aa1.01□□□□□ -2.25
TVP23B-205ENST00000572845 AKAP13Q12802 2813 aa1.01□□□□□ -2.25
TVP23B-205ENST00000572845 PIEZO1Q92508 2521 aa1.01□□□□□ -2.25
TVP23B-205ENST00000572845 NAV2Q8IVL1 2488 aa1.01□□□□□ -2.25
TVP23B-205ENST00000572845 CREBBPQ92793 2442 aa1.01□□□□□ -2.25
TVP23B-205ENST00000572845 SRRM2Q9UQ35 2752 aaKnown RBP1□□□□□ -2.25
TVP23B-205ENST00000572845 SETD2Q9BYW2 2564 aaPredicted RBP1□□□□□ -2.25
TVP23B-205ENST00000572845 M0QZ58 72 aa1□□□□□ -2.25
TVP23B-205ENST00000572845 DEFB1P60022 68 aa1□□□□□ -2.25
TVP23B-205ENST00000572845 H0YGG7 62 aa0.99□□□□□ -2.25
TVP23B-205ENST00000572845 DEFB135Q30KP9 77 aa0.99□□□□□ -2.25
TVP23B-205ENST00000572845 CHD7Q9P2D1 2997 aa0.99□□□□□ -2.25
TVP23B-205ENST00000572845 DMBT1Q9UGM3 2413 aaPredicted RBP0.99□□□□□ -2.25
TVP23B-205ENST00000572845 NBASA2RRP1 2371 aa0.99□□□□□ -2.25
TVP23B-205ENST00000572845 COL6A5A8TX70 2615 aa0.99□□□□□ -2.25
TVP23B-205ENST00000572845 TENM2Q9NT68 2774 aa0.98□□□□□ -2.25
TVP23B-205ENST00000572845 UBR5O95071 2799 aaPredicted RBP0.98□□□□□ -2.25
TVP23B-205ENST00000572845 A0A0C4DFX4 3053 aa0.98□□□□□ -2.25
TVP23B-205ENST00000572845 CHD6Q8TD26 2715 aa0.98□□□□□ -2.25
TVP23B-205ENST00000572845 CEP250Q9BV73 2442 aa0.97□□□□□ -2.25
TVP23B-205ENST00000572845 OTOGQ6ZRI0 2925 aa0.96□□□□□ -2.26
TVP23B-205ENST00000572845 VWFP04275 2813 aa0.95□□□□□ -2.26
TVP23B-205ENST00000572845 HELZ2Q9BYK8 2649 aaKnown RBP0.95□□□□□ -2.26
TVP23B-205ENST00000572845 CHD9Q3L8U1 2897 aa0.94□□□□□ -2.26
TVP23B-205ENST00000572845 MAP1BP46821 2468 aaKnown RBP0.94□□□□□ -2.26
TVP23B-205ENST00000572845 H3BUX3 64 aa0.94□□□□□ -2.26
TVP23B-205ENST00000572845 BDP1A6H8Y1 2624 aa0.94□□□□□ -2.26
TVP23B-205ENST00000572845 M0R2T5 61 aa0.93□□□□□ -2.26
TVP23B-205ENST00000572845 HTN1P15515 57 aa0.93□□□□□ -2.26
TVP23B-205ENST00000572845 RHPN1-AS1Q9BWJ2 59 aa0.93□□□□□ -2.26
TVP23B-205ENST00000572845 CRYBG3Q68DQ2 2970 aa0.92□□□□□ -2.26
TVP23B-205ENST00000572845 APC2O95996 2303 aa0.92□□□□□ -2.26
TVP23B-205ENST00000572845 TNP1P09430 55 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms