RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 IFITM1P13164 125 aa4.21□□□□□ -1.74
NUP88-205ENST00000572809 Q6ZVH6 145 aa4.21□□□□□ -1.74
NUP88-205ENST00000572809 FP248Q71RG6 208 aaPredicted RBP4.21□□□□□ -1.74
NUP88-205ENST00000572809 DHRS4-AS1Q9P1J3 65 aa4.21□□□□□ -1.74
NUP88-205ENST00000572809 S100A1P23297 94 aa4.2□□□□□ -1.74
NUP88-205ENST00000572809 COX7BP24311 80 aa4.2□□□□□ -1.74
NUP88-205ENST00000572809 S100A2P29034 98 aa4.2□□□□□ -1.74
NUP88-205ENST00000572809 RPS29P62273 56 aaKnown RBP4.2□□□□□ -1.74
NUP88-205ENST00000572809 C6orf99Q4VX62 202 aa4.2□□□□□ -1.74
NUP88-205ENST00000572809 C9orf153Q5TBE3 101 aa4.2□□□□□ -1.74
NUP88-205ENST00000572809 PCP2Q8IVA1 136 aa4.2□□□□□ -1.74
NUP88-205ENST00000572809 MUSTN1Q8IVN3 82 aa4.2□□□□□ -1.74
NUP88-205ENST00000572809 A6NDN8 102 aa4.19□□□□□ -1.74
NUP88-205ENST00000572809 SPRR1BP22528 89 aa4.19□□□□□ -1.74
NUP88-205ENST00000572809 ELOF1P60002 83 aaKnown RBP4.19□□□□□ -1.74
NUP88-205ENST00000572809 SLC25A34Q6PIV7 304 aa4.19□□□□□ -1.74
NUP88-205ENST00000572809 HIST3H2BBQ8N257 126 aa4.19□□□□□ -1.74
NUP88-205ENST00000572809 TRBV7-6A0A0J9YX20 115 aa4.18□□□□□ -1.74
NUP88-205ENST00000572809 A0A0U1RQV1 116 aa4.18□□□□□ -1.74
NUP88-205ENST00000572809 SLC25A20O43772 301 aa4.18□□□□□ -1.74
NUP88-205ENST00000572809 S100A6P06703 90 aa4.18□□□□□ -1.74
NUP88-205ENST00000572809 TAL2Q16559 108 aa4.18□□□□□ -1.74
NUP88-205ENST00000572809 Q8N377 158 aa4.18□□□□□ -1.74
NUP88-205ENST00000572809 DEFB105AQ8NG35 78 aa4.18□□□□□ -1.74
NUP88-205ENST00000572809 HIST1H2BLQ99880 126 aa4.18□□□□□ -1.74
NUP88-205ENST00000572809 LAMTOR3Q9UHA4 124 aa4.18□□□□□ -1.74
NUP88-205ENST00000572809 HSBP1L1C9JCN9 74 aa4.17□□□□□ -1.74
NUP88-205ENST00000572809 KRTAP13-3Q3SY46 172 aa4.17□□□□□ -1.74
NUP88-205ENST00000572809 TRAV13-2A0A0B4J235 113 aa4.16□□□□□ -1.74
NUP88-205ENST00000572809 A0A1B0GWB2 263 aa4.16□□□□□ -1.74
NUP88-205ENST00000572809 PRAC1Q96KF2 57 aa4.16□□□□□ -1.74
NUP88-205ENST00000572809 TEX49A0A1B0GTD5 131 aa4.15□□□□□ -1.75
NUP88-205ENST00000572809 HRCT1Q6UXD1 115 aa4.15□□□□□ -1.75
NUP88-205ENST00000572809 MUC2Q02817 5179 aa4.14□□□□□ -1.75
NUP88-205ENST00000572809 Q1RN00 199 aa4.14□□□□□ -1.75
NUP88-205ENST00000572809 Q6ZVQ6 151 aa4.14□□□□□ -1.75
NUP88-205ENST00000572809 SMIM11BQ8TCY0 68 aa4.14□□□□□ -1.75
NUP88-205ENST00000572809 PRO1933Q9H354 126 aa4.14□□□□□ -1.75
NUP88-205ENST00000572809 VAMP3Q15836 100 aa4.13□□□□□ -1.75
NUP88-205ENST00000572809 LIMD2Q9BT23 127 aa4.13□□□□□ -1.75
NUP88-205ENST00000572809 NHP2Q9NX24 153 aaKnown RBP4.13□□□□□ -1.75
NUP88-205ENST00000572809 IGLV5-48A0A075B6I7 105 aa4.12□□□□□ -1.75
NUP88-205ENST00000572809 CD164Q04900 197 aa4.12□□□□□ -1.75
NUP88-205ENST00000572809 ASB16-AS1Q495Z4 193 aa4.12□□□□□ -1.75
NUP88-205ENST00000572809 H7C2G1 150 aa4.11□□□□□ -1.75
NUP88-205ENST00000572809 FAM218AQ96MZ4 157 aa4.11□□□□□ -1.75
NUP88-205ENST00000572809 MUC17Q685J3 4493 aa4.1□□□□□ -1.75
NUP88-205ENST00000572809 COX8AP10176 69 aa4.1□□□□□ -1.75
NUP88-205ENST00000572809 LINC00575Q6W349 94 aa4.1□□□□□ -1.75
NUP88-205ENST00000572809 HIST1H4GQ99525 98 aa4.1□□□□□ -1.75
NUP88-205ENST00000572809 hADV29S1A0JD25 119 aa4.09□□□□□ -1.75
NUP88-205ENST00000572809 A0A0G2JQZ4 141 aa4.08□□□□□ -1.76
NUP88-205ENST00000572809 DLEU1O43261 78 aa4.08□□□□□ -1.76
NUP88-205ENST00000572809 Q5XG85 94 aa4.08□□□□□ -1.76
NUP88-205ENST00000572809 F8WEM9 126 aa4.07□□□□□ -1.76
NUP88-205ENST00000572809 BVES-AS1Q5T3Y7 98 aa4.07□□□□□ -1.76
NUP88-205ENST00000572809 Q6ZQY7 126 aa4.07□□□□□ -1.76
NUP88-205ENST00000572809 NOTCH2NLQ7Z3S9 236 aa4.07□□□□□ -1.76
NUP88-205ENST00000572809 C14orf144Q96I85 54 aa4.07□□□□□ -1.76
NUP88-205ENST00000572809 C12orf57Q99622 126 aa4.07□□□□□ -1.76
NUP88-205ENST00000572809 KRTAP4-1Q9BYQ7 146 aa4.07□□□□□ -1.76
NUP88-205ENST00000572809 C9orf92A6NGG3 77 aa4.06□□□□□ -1.76
NUP88-205ENST00000572809 SPATA45Q537H7 98 aa4.06□□□□□ -1.76
NUP88-205ENST00000572809 C1orf195Q5TG92 126 aa4.06□□□□□ -1.76
NUP88-205ENST00000572809 TCL1BO95988 128 aa4.05□□□□□ -1.76
NUP88-205ENST00000572809 CFC1BP0CG36 223 aa4.05□□□□□ -1.76
NUP88-205ENST00000572809 CFC1P0CG37 223 aa4.05□□□□□ -1.76
NUP88-205ENST00000572809 OCIAD2Q56VL3 154 aa4.05□□□□□ -1.76
NUP88-205ENST00000572809 KRTAP5-1Q6L8H4 278 aa4.05□□□□□ -1.76
NUP88-205ENST00000572809 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.05□□□□□ -1.76
NUP88-205ENST00000572809 RAB37Q96AX2 223 aa4.05□□□□□ -1.76
NUP88-205ENST00000572809 SNHG12Q9BXW3 62 aa4.05□□□□□ -1.76
NUP88-205ENST00000572809 HIGD1BQ9P298 99 aa4.05□□□□□ -1.76
NUP88-205ENST00000572809 IGLV8-61A0A075B6I0 122 aa4.04□□□□□ -1.76
NUP88-205ENST00000572809 SNCGO76070 127 aa4.04□□□□□ -1.76
NUP88-205ENST00000572809 Q6JHZ5 121 aa4.04□□□□□ -1.76
NUP88-205ENST00000572809 VAMP8Q9BV40 100 aa4.04□□□□□ -1.76
NUP88-205ENST00000572809 H0YGX0 51 aa4.03□□□□□ -1.76
NUP88-205ENST00000572809 IGFL1Q6UW32 110 aa4.03□□□□□ -1.76
NUP88-205ENST00000572809 PPDPFLQ8WWR9 84 aa4.03□□□□□ -1.76
NUP88-205ENST00000572809 A0A0B4J2C4 111 aa4.02□□□□□ -1.77
NUP88-205ENST00000572809 PCOTHQ58A44 107 aa4.02□□□□□ -1.77
NUP88-205ENST00000572809 C2orf91Q6ZV80 131 aa4.02□□□□□ -1.77
NUP88-205ENST00000572809 CEND1Q8N111 149 aa4.02□□□□□ -1.77
NUP88-205ENST00000572809 CLEC2BQ92478 149 aa4.02□□□□□ -1.77
NUP88-205ENST00000572809 TRBV7-7A0A0K0K1E9 115 aa4.01□□□□□ -1.77
NUP88-205ENST00000572809 FAT4Q6V0I7 4981 aa4□□□□□ -1.77
NUP88-205ENST00000572809 PRO1854Q9UHT4 67 aa4□□□□□ -1.77
NUP88-205ENST00000572809 H3BUT2 72 aa3.99□□□□□ -1.77
NUP88-205ENST00000572809 NDUFV3P56181 108 aaKnown RBP3.99□□□□□ -1.77
NUP88-205ENST00000572809 A0A1B0GX51 115 aa3.98□□□□□ -1.77
NUP88-205ENST00000572809 FXYD2P54710 66 aa3.98□□□□□ -1.77
NUP88-205ENST00000572809 RPL37P61927 97 aaKnown RBP3.98□□□□□ -1.77
NUP88-205ENST00000572809 PYY3Q5JQD4 70 aa3.98□□□□□ -1.77
NUP88-205ENST00000572809 LST1O00453 97 aa3.97□□□□□ -1.77
NUP88-205ENST00000572809 TEN1Q86WV5 123 aa3.97□□□□□ -1.77
NUP88-205ENST00000572809 H3BMG7 143 aa3.96□□□□□ -1.78
NUP88-205ENST00000572809 FABP2P12104 132 aa3.96□□□□□ -1.78
NUP88-205ENST00000572809 Q6Q795 121 aa3.96□□□□□ -1.78
NUP88-205ENST00000572809 HSD52Q0P140 79 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms