RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 hADV29S1A0JD25 119 aa9.57□□□□□ -0.88
CHD3-214ENST00000572579 KRTAP10-6P60371 365 aaPredicted RBP9.57□□□□□ -0.88
CHD3-214ENST00000572579 IGFL1Q6UW32 110 aa9.57□□□□□ -0.88
CHD3-214ENST00000572579 TCL1BO95988 128 aa9.56□□□□□ -0.88
CHD3-214ENST00000572579 VAMP3Q15836 100 aa9.56□□□□□ -0.88
CHD3-214ENST00000572579 C12orf57Q99622 126 aa9.55□□□□□ -0.88
CHD3-214ENST00000572579 TRBV7-7A0A0K0K1E9 115 aa9.54□□□□□ -0.88
CHD3-214ENST00000572579 S100A1P23297 94 aa9.54□□□□□ -0.88
CHD3-214ENST00000572579 OCIAD2Q56VL3 154 aa9.54□□□□□ -0.88
CHD3-214ENST00000572579 F8WEM9 126 aa9.52□□□□□ -0.89
CHD3-214ENST00000572579 S100A2P29034 98 aa9.52□□□□□ -0.89
CHD3-214ENST00000572579 CFC1BP0CG36 223 aa9.51□□□□□ -0.89
CHD3-214ENST00000572579 Q6JHZ5 121 aa9.51□□□□□ -0.89
CHD3-214ENST00000572579 CLEC2BQ92478 149 aa9.51□□□□□ -0.89
CHD3-214ENST00000572579 HSBP1L1C9JCN9 74 aa9.5□□□□□ -0.89
CHD3-214ENST00000572579 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.5□□□□□ -0.89
CHD3-214ENST00000572579 H3BUT2 72 aa9.48□□□□□ -0.89
CHD3-214ENST00000572579 COX8AP10176 69 aa9.46□□□□□ -0.9
CHD3-214ENST00000572579 OBSCN-AS1Q96MR7 158 aa9.46□□□□□ -0.9
CHD3-214ENST00000572579 HIST1H4GQ99525 98 aa9.46□□□□□ -0.9
CHD3-214ENST00000572579 CFC1P0CG37 223 aa9.45□□□□□ -0.9
CHD3-214ENST00000572579 SCGB1D1O95968 90 aa9.44□□□□□ -0.9
CHD3-214ENST00000572579 BVES-AS1Q5T3Y7 98 aa9.43□□□□□ -0.9
CHD3-214ENST00000572579 FAM218AQ96MZ4 157 aa9.43□□□□□ -0.9
CHD3-214ENST00000572579 DLEU1O43261 78 aa9.42□□□□□ -0.9
CHD3-214ENST00000572579 Q75L30 129 aa9.42□□□□□ -0.9
CHD3-214ENST00000572579 PPDPFLQ8WWR9 84 aa9.42□□□□□ -0.9
CHD3-214ENST00000572579 SNHG12Q9BXW3 62 aa9.42□□□□□ -0.9
CHD3-214ENST00000572579 M0R2T5 61 aa9.41□□□□□ -0.9
CHD3-214ENST00000572579 S100A6P06703 90 aa9.41□□□□□ -0.9
CHD3-214ENST00000572579 COX6B2Q6YFQ2 88 aa9.41□□□□□ -0.9
CHD3-214ENST00000572579 C14orf144Q96I85 54 aa9.4□□□□□ -0.9
CHD3-214ENST00000572579 LST1O00453 97 aa9.37□□□□□ -0.91
CHD3-214ENST00000572579 Q6Q795 121 aa9.37□□□□□ -0.91
CHD3-214ENST00000572579 C2orf91Q6ZV80 131 aa9.37□□□□□ -0.91
CHD3-214ENST00000572579 ATP11AUNQ6ZP68 121 aa9.35□□□□□ -0.91
CHD3-214ENST00000572579 NDUFV3P56181 108 aaKnown RBP9.34□□□□□ -0.91
CHD3-214ENST00000572579 Q96NJ1 140 aa9.34□□□□□ -0.91
CHD3-214ENST00000572579 HIGD1BQ9P298 99 aa9.34□□□□□ -0.91
CHD3-214ENST00000572579 A0A0B4J2C4 111 aa9.33□□□□□ -0.92
CHD3-214ENST00000572579 PAM16Q9Y3D7 125 aa9.33□□□□□ -0.92
CHD3-214ENST00000572579 RAB37Q96AX2 223 aa9.32□□□□□ -0.92
CHD3-214ENST00000572579 C20orf166-AS1Q96NR2 134 aa9.32□□□□□ -0.92
CHD3-214ENST00000572579 H0YGX0 51 aa9.31□□□□□ -0.92
CHD3-214ENST00000572579 A8MUU9 505 aa9.3□□□□□ -0.92
CHD3-214ENST00000572579 SPATA45Q537H7 98 aa9.3□□□□□ -0.92
CHD3-214ENST00000572579 TEN1Q86WV5 123 aa9.3□□□□□ -0.92
CHD3-214ENST00000572579 A0A087WSZ3 146 aa9.29□□□□□ -0.92
CHD3-214ENST00000572579 A0A1W2PNM2 257 aa9.28□□□□□ -0.92
CHD3-214ENST00000572579 H3BMG7 143 aa9.27□□□□□ -0.93
CHD3-214ENST00000572579 CEND1Q8N111 149 aa9.27□□□□□ -0.93
CHD3-214ENST00000572579 KRTAP16-1A8MUX0 517 aa9.26□□□□□ -0.93
CHD3-214ENST00000572579 FXYD2P54710 66 aa9.26□□□□□ -0.93
CHD3-214ENST00000572579 SS18L2Q9UHA2 77 aa9.26□□□□□ -0.93
CHD3-214ENST00000572579 USH2AO75445 5202 aa9.24□□□□□ -0.93
CHD3-214ENST00000572579 DSCR10P59022 87 aa9.24□□□□□ -0.93
CHD3-214ENST00000572579 KRTAP9-8Q9BYQ0 159 aa9.24□□□□□ -0.93
CHD3-214ENST00000572579 PRO1854Q9UHT4 67 aa9.24□□□□□ -0.93
CHD3-214ENST00000572579 TRIAP1O43715 76 aa9.23□□□□□ -0.93
CHD3-214ENST00000572579 FABP2P12104 132 aa9.23□□□□□ -0.93
CHD3-214ENST00000572579 VAMP8Q9BV40 100 aa9.22□□□□□ -0.93
CHD3-214ENST00000572579 A0A1B0GX51 115 aa9.21□□□□□ -0.94
CHD3-214ENST00000572579 SNCGO76070 127 aa9.2□□□□□ -0.94
CHD3-214ENST00000572579 SSPOA2VEC9 5147 aa9.2□□□□□ -0.94
CHD3-214ENST00000572579 NOTCH2NLQ7Z3S9 236 aa9.19□□□□□ -0.94
CHD3-214ENST00000572579 K7ERJ3 54 aa9.15□□□□□ -0.94
CHD3-214ENST00000572579 A0A1B0GV72 72 aa9.14□□□□□ -0.95
CHD3-214ENST00000572579 TMEM238LA0A1B0GVL6 79 aa9.13□□□□□ -0.95
CHD3-214ENST00000572579 A6NJY4 79 aa9.13□□□□□ -0.95
CHD3-214ENST00000572579 TRBV7-4A0A0J9YYF1 115 aa9.12□□□□□ -0.95
CHD3-214ENST00000572579 LINC00313P59037 77 aa9.12□□□□□ -0.95
CHD3-214ENST00000572579 DEFB116Q30KQ4 102 aa9.12□□□□□ -0.95
CHD3-214ENST00000572579 ANKRD29Q8N6D5 301 aa9.12□□□□□ -0.95
CHD3-214ENST00000572579 SIGMAR1Q99720 223 aa9.12□□□□□ -0.95
CHD3-214ENST00000572579 LINC00472Q9H8W2 130 aa9.12□□□□□ -0.95
CHD3-214ENST00000572579 IGKV4-1P06312 121 aa9.11□□□□□ -0.95
CHD3-214ENST00000572579 GHRHP01286 108 aa9.1□□□□□ -0.95
CHD3-214ENST00000572579 PYY3Q5JQD4 70 aa9.1□□□□□ -0.95
CHD3-214ENST00000572579 MPLKIPQ8TAP9 179 aa9.09□□□□□ -0.95
CHD3-214ENST00000572579 ORMDL1Q9P0S3 153 aa9.09□□□□□ -0.95
CHD3-214ENST00000572579 TRBV20-1A0A075B6N2 111 aa9.07□□□□□ -0.96
CHD3-214ENST00000572579 HRES1P13985 223 aa9.07□□□□□ -0.96
CHD3-214ENST00000572579 HSD52Q0P140 79 aa9.07□□□□□ -0.96
CHD3-214ENST00000572579 MT2AP02795 61 aa9.06□□□□□ -0.96
CHD3-214ENST00000572579 PSMB2P49721 201 aa9.05□□□□□ -0.96
CHD3-214ENST00000572579 TMEM256-PLSCR3K7ERE1 68 aa9.04□□□□□ -0.96
CHD3-214ENST00000572579 DNAL4O96015 105 aa9.04□□□□□ -0.96
CHD3-214ENST00000572579 CCKP06307 115 aa9.04□□□□□ -0.96
CHD3-214ENST00000572579 IGHV6-1A0A0B4J1U7 121 aa9.01□□□□□ -0.97
CHD3-214ENST00000572579 H3BQ85 93 aa9.01□□□□□ -0.97
CHD3-214ENST00000572579 UBE2V1Q13404 147 aa9.01□□□□□ -0.97
CHD3-214ENST00000572579 MT1FP04733 61 aa9□□□□□ -0.97
CHD3-214ENST00000572579 TRACP01848 142 aa8.99□□□□□ -0.97
CHD3-214ENST00000572579 TMA7Q9Y2S6 64 aaKnown RBP8.99□□□□□ -0.97
CHD3-214ENST00000572579 FCGBPQ9Y6R7 5405 aaPredicted RBP8.99□□□□□ -0.97
CHD3-214ENST00000572579 LCE2BO14633 110 aa8.97□□□□□ -0.97
CHD3-214ENST00000572579 COX6CP09669 75 aa8.97□□□□□ -0.97
CHD3-214ENST00000572579 LOC105371267A0A1B0GV96 52 aa8.95□□□□□ -0.98
CHD3-214ENST00000572579 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.95□□□□□ -0.98
CHD3-214ENST00000572579 KRTAP9-3Q9BYQ3 159 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms