RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 BVES-AS1Q5T3Y7 98 aa9.76□□□□□ -0.85
CTDNEP1-207ENST00000572043 RAB37Q96AX2 223 aa9.75□□□□□ -0.85
CTDNEP1-207ENST00000572043 C1orf195Q5TG92 126 aa9.74□□□□□ -0.85
CTDNEP1-207ENST00000572043 C2orf91Q6ZV80 131 aa9.74□□□□□ -0.85
CTDNEP1-207ENST00000572043 HIGD1BQ9P298 99 aa9.73□□□□□ -0.85
CTDNEP1-207ENST00000572043 LCE2AQ5TA79 106 aaPredicted RBP9.72□□□□□ -0.85
CTDNEP1-207ENST00000572043 Q5XG85 94 aa9.72□□□□□ -0.85
CTDNEP1-207ENST00000572043 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.72□□□□□ -0.85
CTDNEP1-207ENST00000572043 FAT4Q6V0I7 4981 aa9.7□□□□□ -0.86
CTDNEP1-207ENST00000572043 A0A0B4J2C4 111 aa9.69□□□□□ -0.86
CTDNEP1-207ENST00000572043 IGFL1Q6UW32 110 aa9.69□□□□□ -0.86
CTDNEP1-207ENST00000572043 TCL1BO95988 128 aa9.68□□□□□ -0.86
CTDNEP1-207ENST00000572043 OCIAD2Q56VL3 154 aa9.68□□□□□ -0.86
CTDNEP1-207ENST00000572043 SNHG12Q9BXW3 62 aa9.68□□□□□ -0.86
CTDNEP1-207ENST00000572043 PCOTHQ58A44 107 aa9.67□□□□□ -0.86
CTDNEP1-207ENST00000572043 Q6JHZ5 121 aa9.67□□□□□ -0.86
CTDNEP1-207ENST00000572043 CEND1Q8N111 149 aa9.67□□□□□ -0.86
CTDNEP1-207ENST00000572043 CLEC2BQ92478 149 aa9.67□□□□□ -0.86
CTDNEP1-207ENST00000572043 H3BUT2 72 aa9.66□□□□□ -0.86
CTDNEP1-207ENST00000572043 FAM218AQ96MZ4 157 aa9.66□□□□□ -0.86
CTDNEP1-207ENST00000572043 IGLV8-61A0A075B6I0 122 aa9.65□□□□□ -0.86
CTDNEP1-207ENST00000572043 TRBV7-7A0A0K0K1E9 115 aa9.64□□□□□ -0.87
CTDNEP1-207ENST00000572043 FXYD2P54710 66 aa9.64□□□□□ -0.87
CTDNEP1-207ENST00000572043 TMA7Q9Y2S6 64 aaKnown RBP9.64□□□□□ -0.87
CTDNEP1-207ENST00000572043 PYY3Q5JQD4 70 aa9.63□□□□□ -0.87
CTDNEP1-207ENST00000572043 PPDPFLQ8WWR9 84 aa9.63□□□□□ -0.87
CTDNEP1-207ENST00000572043 TMEM238LA0A1B0GVL6 79 aa9.62□□□□□ -0.87
CTDNEP1-207ENST00000572043 A6NJY4 79 aa9.62□□□□□ -0.87
CTDNEP1-207ENST00000572043 H0YGX0 51 aa9.62□□□□□ -0.87
CTDNEP1-207ENST00000572043 PRO1854Q9UHT4 67 aa9.62□□□□□ -0.87
CTDNEP1-207ENST00000572043 SNCGO76070 127 aa9.61□□□□□ -0.87
CTDNEP1-207ENST00000572043 TRIAP1O43715 76 aa9.57□□□□□ -0.88
CTDNEP1-207ENST00000572043 K7ERJ3 54 aa9.56□□□□□ -0.88
CTDNEP1-207ENST00000572043 NDUFV3P56181 108 aaKnown RBP9.56□□□□□ -0.88
CTDNEP1-207ENST00000572043 FABP2P12104 132 aa9.55□□□□□ -0.88
CTDNEP1-207ENST00000572043 HSD52Q0P140 79 aa9.55□□□□□ -0.88
CTDNEP1-207ENST00000572043 RPL37P61927 97 aaKnown RBP9.54□□□□□ -0.88
CTDNEP1-207ENST00000572043 A0A1B0GX51 115 aa9.52□□□□□ -0.89
CTDNEP1-207ENST00000572043 LST1O00453 97 aa9.52□□□□□ -0.89
CTDNEP1-207ENST00000572043 PSMB2P49721 201 aa9.52□□□□□ -0.89
CTDNEP1-207ENST00000572043 H3BMG7 143 aa9.51□□□□□ -0.89
CTDNEP1-207ENST00000572043 KRTAP9-2Q9BYQ4 174 aa9.51□□□□□ -0.89
CTDNEP1-207ENST00000572043 A0A1B0GV72 72 aa9.49□□□□□ -0.89
CTDNEP1-207ENST00000572043 OBSCN-AS1Q96MR7 158 aa9.49□□□□□ -0.89
CTDNEP1-207ENST00000572043 UQCR10Q9UDW1 63 aa9.49□□□□□ -0.89
CTDNEP1-207ENST00000572043 GHRHP01286 108 aa9.48□□□□□ -0.89
CTDNEP1-207ENST00000572043 TEN1Q86WV5 123 aa9.48□□□□□ -0.89
CTDNEP1-207ENST00000572043 A0A087WSZ3 146 aa9.47□□□□□ -0.89
CTDNEP1-207ENST00000572043 DNAL4O96015 105 aa9.47□□□□□ -0.89
CTDNEP1-207ENST00000572043 LCE2CQ5TA81 110 aa9.47□□□□□ -0.89
CTDNEP1-207ENST00000572043 Q6Q795 121 aa9.47□□□□□ -0.89
CTDNEP1-207ENST00000572043 KRTAP19-2Q3LHN2 52 aa9.46□□□□□ -0.9
CTDNEP1-207ENST00000572043 SS18L2Q9UHA2 77 aa9.46□□□□□ -0.9
CTDNEP1-207ENST00000572043 ORMDL1Q9P0S3 153 aa9.44□□□□□ -0.9
CTDNEP1-207ENST00000572043 COX6CP09669 75 aa9.43□□□□□ -0.9
CTDNEP1-207ENST00000572043 A0A1W2PNM2 257 aa9.41□□□□□ -0.9
CTDNEP1-207ENST00000572043 Q96NJ1 140 aa9.4□□□□□ -0.9
CTDNEP1-207ENST00000572043 ANKRD29Q8N6D5 301 aa9.39□□□□□ -0.91
CTDNEP1-207ENST00000572043 TMEM256-PLSCR3K7ERE1 68 aa9.37□□□□□ -0.91
CTDNEP1-207ENST00000572043 SCGB1C2P0DMR2 95 aa9.37□□□□□ -0.91
CTDNEP1-207ENST00000572043 MT1HP80294 61 aa9.37□□□□□ -0.91
CTDNEP1-207ENST00000572043 ATP11AUNQ6ZP68 121 aa9.37□□□□□ -0.91
CTDNEP1-207ENST00000572043 Q75L30 129 aa9.37□□□□□ -0.91
CTDNEP1-207ENST00000572043 H3BQ85 93 aa9.35□□□□□ -0.91
CTDNEP1-207ENST00000572043 SIGMAR1Q99720 223 aa9.35□□□□□ -0.91
CTDNEP1-207ENST00000572043 DSCR10P59022 87 aa9.33□□□□□ -0.92
CTDNEP1-207ENST00000572043 COX6B2Q6YFQ2 88 aa9.33□□□□□ -0.92
CTDNEP1-207ENST00000572043 TRBV7-4A0A0J9YYF1 115 aa9.32□□□□□ -0.92
CTDNEP1-207ENST00000572043 TRACP01848 142 aa9.3□□□□□ -0.92
CTDNEP1-207ENST00000572043 CCKP06307 115 aa9.3□□□□□ -0.92
CTDNEP1-207ENST00000572043 UBE2V1Q13404 147 aa9.3□□□□□ -0.92
CTDNEP1-207ENST00000572043 IGKV4-1P06312 121 aa9.29□□□□□ -0.92
CTDNEP1-207ENST00000572043 DEFB116Q30KQ4 102 aa9.29□□□□□ -0.92
CTDNEP1-207ENST00000572043 VPS25Q9BRG1 176 aa9.29□□□□□ -0.92
CTDNEP1-207ENST00000572043 C20orf166-AS1Q96NR2 134 aa9.28□□□□□ -0.92
CTDNEP1-207ENST00000572043 NAA38Q9BRA0 125 aaKnown RBP9.27□□□□□ -0.93
CTDNEP1-207ENST00000572043 A8MUU9 505 aa9.26□□□□□ -0.93
CTDNEP1-207ENST00000572043 M0R2T5 61 aa9.25□□□□□ -0.93
CTDNEP1-207ENST00000572043 M0R143 59 aa9.24□□□□□ -0.93
CTDNEP1-207ENST00000572043 BAALC-AS2P0C853 105 aa9.24□□□□□ -0.93
CTDNEP1-207ENST00000572043 RBM3P98179 157 aaKnown RBP9.24□□□□□ -0.93
CTDNEP1-207ENST00000572043 LINC00313P59037 77 aa9.23□□□□□ -0.93
CTDNEP1-207ENST00000572043 DSCR8Q96T75 97 aa9.22□□□□□ -0.93
CTDNEP1-207ENST00000572043 LINC00472Q9H8W2 130 aa9.22□□□□□ -0.93
CTDNEP1-207ENST00000572043 NOTCH2NLQ7Z3S9 236 aa9.2□□□□□ -0.94
CTDNEP1-207ENST00000572043 IGHV6-1A0A0B4J1U7 121 aa9.19□□□□□ -0.94
CTDNEP1-207ENST00000572043 SMIM6P0DI80 62 aa9.19□□□□□ -0.94
CTDNEP1-207ENST00000572043 LCE2DQ5TA82 110 aaPredicted RBP9.19□□□□□ -0.94
CTDNEP1-207ENST00000572043 KRTAP9-6A0A140TA67 174 aa9.18□□□□□ -0.94
CTDNEP1-207ENST00000572043 KRTAP10-6P60371 365 aaPredicted RBP9.18□□□□□ -0.94
CTDNEP1-207ENST00000572043 ATXN8Q156A1 80 aa9.18□□□□□ -0.94
CTDNEP1-207ENST00000572043 KRTAP16-1A8MUX0 517 aa9.17□□□□□ -0.94
CTDNEP1-207ENST00000572043 C9JAW5 83 aa9.16□□□□□ -0.94
CTDNEP1-207ENST00000572043 LORP23490 312 aaPredicted RBP9.16□□□□□ -0.94
CTDNEP1-207ENST00000572043 BATFQ16520 125 aa9.15□□□□□ -0.94
CTDNEP1-207ENST00000572043 TRBV20-1A0A075B6N2 111 aa9.11□□□□□ -0.95
CTDNEP1-207ENST00000572043 A0A1B0GVX0 72 aa9.1□□□□□ -0.95
CTDNEP1-207ENST00000572043 TSTD3H0UI37 97 aa9.1□□□□□ -0.95
CTDNEP1-207ENST00000572043 JMJD7-PLA2G4BH0Y9G9 81 aa9.08□□□□□ -0.96
CTDNEP1-207ENST00000572043 Q6ZQT0 140 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms