RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.25□□□□□ -0.77
RAB40B-206ENST00000571995 KRTAP7-1Q8IUC3 87 aa10.25□□□□□ -0.77
RAB40B-206ENST00000571995 MP68P56378 58 aa10.24□□□□□ -0.77
RAB40B-206ENST00000571995 FBN3Q75N90 2809 aa10.23□□□□□ -0.77
RAB40B-206ENST00000571995 F8WDY8 70 aa10.23□□□□□ -0.77
RAB40B-206ENST00000571995 C9orf163Q8N9P6 203 aa10.21□□□□□ -0.78
RAB40B-206ENST00000571995 LINC00474Q9P2X8 69 aa10.21□□□□□ -0.78
RAB40B-206ENST00000571995 TLX1NBP0CAT3 122 aa10.21□□□□□ -0.78
RAB40B-206ENST00000571995 PCOTHQ58A44 107 aa10.2□□□□□ -0.78
RAB40B-206ENST00000571995 KRTAP11-1Q8IUC1 163 aa10.2□□□□□ -0.78
RAB40B-206ENST00000571995 C4orf26Q17RF5 130 aa10.2□□□□□ -0.78
RAB40B-206ENST00000571995 A0A087WTM6 91 aa10.18□□□□□ -0.78
RAB40B-206ENST00000571995 CASC2Q6XLA1 102 aa10.17□□□□□ -0.78
RAB40B-206ENST00000571995 HCG22E2RYF7 251 aa10.16□□□□□ -0.78
RAB40B-206ENST00000571995 C5orf47Q569G3 176 aa10.13□□□□□ -0.79
RAB40B-206ENST00000571995 DMBT1Q9UGM3 2413 aaPredicted RBP10.13□□□□□ -0.79
RAB40B-206ENST00000571995 TNP2Q05952 138 aa10.13□□□□□ -0.79
RAB40B-206ENST00000571995 IGLV5-48A0A075B6I7 105 aa10.12□□□□□ -0.79
RAB40B-206ENST00000571995 H7BZZ5 65 aa10.12□□□□□ -0.79
RAB40B-206ENST00000571995 PSORS1C2Q9UIG4 136 aa10.12□□□□□ -0.79
RAB40B-206ENST00000571995 BCE1O60756 84 aa10.11□□□□□ -0.79
RAB40B-206ENST00000571995 PKIGQ9Y2B9 76 aa10.1□□□□□ -0.79
RAB40B-206ENST00000571995 FLG2Q5D862 2391 aaPredicted RBP10.09□□□□□ -0.79
RAB40B-206ENST00000571995 CNBPP62633 177 aaKnown RBP10.09□□□□□ -0.79
RAB40B-206ENST00000571995 PLA2G2DQ9UNK4 145 aa10.09□□□□□ -0.79
RAB40B-206ENST00000571995 BRK1Q8WUW1 75 aa10.09□□□□□ -0.79
RAB40B-206ENST00000571995 DSCR10P59022 87 aa10.08□□□□□ -0.8
RAB40B-206ENST00000571995 ANK2Q01484 3957 aa10.08□□□□□ -0.8
RAB40B-206ENST00000571995 A0A0U1RQV1 116 aa10.07□□□□□ -0.8
RAB40B-206ENST00000571995 SPRR1AP35321 89 aa10.07□□□□□ -0.8
RAB40B-206ENST00000571995 KRTAP4-16G5E9R7 235 aaPredicted RBP10.07□□□□□ -0.8
RAB40B-206ENST00000571995 SMR3BP02814 79 aaPredicted RBP10.07□□□□□ -0.8
RAB40B-206ENST00000571995 C4orf48Q5BLP8 95 aa10.07□□□□□ -0.8
RAB40B-206ENST00000571995 H0Y9P7 68 aa10.06□□□□□ -0.8
RAB40B-206ENST00000571995 OXTP01178 125 aa10.04□□□□□ -0.8
RAB40B-206ENST00000571995 IGLV5-37A0A075B6J1 123 aa10.04□□□□□ -0.8
RAB40B-206ENST00000571995 MEGF8Q7Z7M0 2845 aa10.04□□□□□ -0.8
RAB40B-206ENST00000571995 PSPHP1O15172 72 aa10.04□□□□□ -0.8
RAB40B-206ENST00000571995 SPACA4Q8TDM5 124 aa10.03□□□□□ -0.8
RAB40B-206ENST00000571995 SERP1Q9Y6X1 66 aa10.02□□□□□ -0.81
RAB40B-206ENST00000571995 ZNF706Q9Y5V0 76 aaPredicted RBP10□□□□□ -0.81
RAB40B-206ENST00000571995 NDUFC1O43677 76 aa10□□□□□ -0.81
RAB40B-206ENST00000571995 KLKP1Q107X0 134 aa9.99□□□□□ -0.81
RAB40B-206ENST00000571995 OCR1Q9BZK8 76 aa9.99□□□□□ -0.81
RAB40B-206ENST00000571995 C1orf64Q8NEQ6 169 aa9.98□□□□□ -0.81
RAB40B-206ENST00000571995 hDV103S1A0JD37 113 aa9.98□□□□□ -0.81
RAB40B-206ENST00000571995 SMIM26A0A096LP01 95 aa9.94□□□□□ -0.82
RAB40B-206ENST00000571995 KRTAP10-2P60368 255 aa9.93□□□□□ -0.82
RAB40B-206ENST00000571995 SPRR4Q96PI1 79 aa9.93□□□□□ -0.82
RAB40B-206ENST00000571995 ZNF861PO60384 105 aa9.93□□□□□ -0.82
RAB40B-206ENST00000571995 WWC2-AS2Q96NR7 200 aa9.92□□□□□ -0.82
RAB40B-206ENST00000571995 PRR15Q8IV56 129 aa9.91□□□□□ -0.82
RAB40B-206ENST00000571995 A8MWP4 228 aa9.89□□□□□ -0.83
RAB40B-206ENST00000571995 RPS28P62857 69 aaKnown RBP9.88□□□□□ -0.83
RAB40B-206ENST00000571995 FAM229BQ4G0N7 80 aa9.88□□□□□ -0.83
RAB40B-206ENST00000571995 DNAH10Q8IVF4 4471 aa9.88□□□□□ -0.83
RAB40B-206ENST00000571995 HUWE1Q7Z6Z7 4374 aaKnown RBP9.87□□□□□ -0.83
RAB40B-206ENST00000571995 CHKB-CPT1BH3BT56 60 aa9.85□□□□□ -0.83
RAB40B-206ENST00000571995 SPTSSBQ8NFR3 76 aa9.85□□□□□ -0.83
RAB40B-206ENST00000571995 PLA2G1BP04054 148 aaKnown RBP9.84□□□□□ -0.83
RAB40B-206ENST00000571995 IGKV2D-30A0A075B6S6 120 aa9.84□□□□□ -0.83
RAB40B-206ENST00000571995 IGLV7-43P04211 117 aa9.84□□□□□ -0.83
RAB40B-206ENST00000571995 IGKV2-30P06310 120 aa9.84□□□□□ -0.83
RAB40B-206ENST00000571995 Q6ZRN7 208 aaPredicted RBP9.84□□□□□ -0.83
RAB40B-206ENST00000571995 LYSTQ99698 3801 aa9.83□□□□□ -0.84
RAB40B-206ENST00000571995 TRAV22A0A0B4J277 110 aa9.82□□□□□ -0.84
RAB40B-206ENST00000571995 A0A1B0GW54 56 aa9.81□□□□□ -0.84
RAB40B-206ENST00000571995 SPINK1P00995 79 aa9.81□□□□□ -0.84
RAB40B-206ENST00000571995 LINC00336Q6ZUF6 198 aa9.8□□□□□ -0.84
RAB40B-206ENST00000571995 ATP5EP56381 51 aaPredicted RBP9.79□□□□□ -0.84
RAB40B-206ENST00000571995 C8orf17Q9NRJ1 99 aa9.78□□□□□ -0.84
RAB40B-206ENST00000571995 PRR15LQ9BU68 103 aa9.76□□□□□ -0.85
RAB40B-206ENST00000571995 KRTAP10-1P60331 282 aa9.76□□□□□ -0.85
RAB40B-206ENST00000571995 TYMSOSQ8TAI1 123 aa9.76□□□□□ -0.85
RAB40B-206ENST00000571995 SPAG11AQ6PDA7 123 aa9.76□□□□□ -0.85
RAB40B-206ENST00000571995 A0A087X002 238 aa9.75□□□□□ -0.85
RAB40B-206ENST00000571995 FP248Q71RG6 208 aaPredicted RBP9.75□□□□□ -0.85
RAB40B-206ENST00000571995 NOTCH2NLQ7Z3S9 236 aa9.75□□□□□ -0.85
RAB40B-206ENST00000571995 Q5XG85 94 aa9.75□□□□□ -0.85
RAB40B-206ENST00000571995 LINC00472Q9H8W2 130 aa9.75□□□□□ -0.85
RAB40B-206ENST00000571995 A0A1B0GVX0 72 aa9.72□□□□□ -0.85
RAB40B-206ENST00000571995 A8MUN3 132 aa9.72□□□□□ -0.85
RAB40B-206ENST00000571995 MRPL34Q9BQ48 92 aaKnown RBP9.71□□□□□ -0.86
RAB40B-206ENST00000571995 Q6ZR54 194 aa9.7□□□□□ -0.86
RAB40B-206ENST00000571995 A6NED7 52 aa9.7□□□□□ -0.86
RAB40B-206ENST00000571995 C9orf92A6NGG3 77 aa9.7□□□□□ -0.86
RAB40B-206ENST00000571995 MMP24-AS1A0A0U1RRL7 71 aa9.69□□□□□ -0.86
RAB40B-206ENST00000571995 LINC00313P59037 77 aa9.69□□□□□ -0.86
RAB40B-206ENST00000571995 PLAC8Q9NZF1 115 aa9.69□□□□□ -0.86
RAB40B-206ENST00000571995 Q96NJ1 140 aa9.67□□□□□ -0.86
RAB40B-206ENST00000571995 IGLV8-61A0A075B6I0 122 aa9.67□□□□□ -0.86
RAB40B-206ENST00000571995 PRR26Q8N8Z3 221 aa9.67□□□□□ -0.86
RAB40B-206ENST00000571995 SPRR1BP22528 89 aa9.66□□□□□ -0.86
RAB40B-206ENST00000571995 PLECQ15149 4684 aaKnown RBP9.63□□□□□ -0.87
RAB40B-206ENST00000571995 DNHD1Q96M86 4753 aa9.61□□□□□ -0.87
RAB40B-206ENST00000571995 COA5Q86WW8 74 aa9.6□□□□□ -0.87
RAB40B-206ENST00000571995 DNAH9Q9NYC9 4486 aa9.59□□□□□ -0.87
RAB40B-206ENST00000571995 KRTAP13-1Q8IUC0 172 aa9.58□□□□□ -0.88
RAB40B-206ENST00000571995 KRTAP29-1A8MX34 341 aaPredicted RBP9.58□□□□□ -0.88
RAB40B-206ENST00000571995 TP53AIP1Q9HCN2 124 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms