RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 A0A096LNI7 61 aa11.02□□□□□ -0.65
SCARF1-205ENST00000571272 ZCCHC13Q8WW36 166 aaKnown RBP11.01□□□□□ -0.65
SCARF1-205ENST00000571272 DNAH10Q8IVF4 4471 aa11.01□□□□□ -0.65
SCARF1-205ENST00000571272 hDV103S1A0JD37 113 aa10.99□□□□□ -0.65
SCARF1-205ENST00000571272 C1orf64Q8NEQ6 169 aa10.99□□□□□ -0.65
SCARF1-205ENST00000571272 RPL37AP61513 92 aaKnown RBP10.99□□□□□ -0.65
SCARF1-205ENST00000571272 CSMD3Q7Z407 3707 aa10.99□□□□□ -0.65
SCARF1-205ENST00000571272 PKIGQ9Y2B9 76 aa10.99□□□□□ -0.65
SCARF1-205ENST00000571272 LYSTQ99698 3801 aa10.98□□□□□ -0.65
SCARF1-205ENST00000571272 DNAH3Q8TD57 4116 aa10.97□□□□□ -0.65
SCARF1-205ENST00000571272 KRTAP1-5Q9BYS1 174 aa10.95□□□□□ -0.66
SCARF1-205ENST00000571272 HUWE1Q7Z6Z7 4374 aaKnown RBP10.94□□□□□ -0.66
SCARF1-205ENST00000571272 C16orf90A8MZG2 172 aa10.94□□□□□ -0.66
SCARF1-205ENST00000571272 UBE2AP49459 152 aa10.94□□□□□ -0.66
SCARF1-205ENST00000571272 STAB2Q8WWQ8 2551 aa10.92□□□□□ -0.66
SCARF1-205ENST00000571272 CHTF8P0CG12 524 aa10.92□□□□□ -0.66
SCARF1-205ENST00000571272 KRTAP11-1Q8IUC1 163 aa10.92□□□□□ -0.66
SCARF1-205ENST00000571272 PHF5AQ7RTV0 110 aaKnown RBP10.91□□□□□ -0.66
SCARF1-205ENST00000571272 IGLV8-61A0A075B6I0 122 aa10.89□□□□□ -0.67
SCARF1-205ENST00000571272 MGAM2Q2M2H8 2515 aa10.89□□□□□ -0.67
SCARF1-205ENST00000571272 LINC00208Q96KT6 92 aa10.89□□□□□ -0.67
SCARF1-205ENST00000571272 MP68P56378 58 aa10.88□□□□□ -0.67
SCARF1-205ENST00000571272 K7EIL1 84 aa10.86□□□□□ -0.67
SCARF1-205ENST00000571272 CNBPP62633 177 aaKnown RBP10.86□□□□□ -0.67
SCARF1-205ENST00000571272 DNAH9Q9NYC9 4486 aa10.86□□□□□ -0.67
SCARF1-205ENST00000571272 TENM2Q9NT68 2774 aa10.85□□□□□ -0.67
SCARF1-205ENST00000571272 PSPHP1O15172 72 aa10.84□□□□□ -0.67
SCARF1-205ENST00000571272 KRTAP29-1A8MX34 341 aaPredicted RBP10.84□□□□□ -0.67
SCARF1-205ENST00000571272 CASC2Q6XLA1 102 aa10.84□□□□□ -0.67
SCARF1-205ENST00000571272 CYP4F30PQ9H0H9 118 aa10.84□□□□□ -0.67
SCARF1-205ENST00000571272 TRAV22A0A0B4J277 110 aa10.83□□□□□ -0.68
SCARF1-205ENST00000571272 NDUFB1O75438 58 aa10.83□□□□□ -0.68
SCARF1-205ENST00000571272 Q1T7F1 81 aa10.82□□□□□ -0.68
SCARF1-205ENST00000571272 PRR15Q8IV56 129 aa10.82□□□□□ -0.68
SCARF1-205ENST00000571272 H0Y9P7 68 aa10.81□□□□□ -0.68
SCARF1-205ENST00000571272 UBE2DNLQ8IWF7 75 aa10.8□□□□□ -0.68
SCARF1-205ENST00000571272 LINC00472Q9H8W2 130 aa10.78□□□□□ -0.68
SCARF1-205ENST00000571272 A8MWP4 228 aa10.77□□□□□ -0.69
SCARF1-205ENST00000571272 COL7A1Q02388 2944 aa10.77□□□□□ -0.69
SCARF1-205ENST00000571272 B9D2Q9BPU9 175 aa10.77□□□□□ -0.69
SCARF1-205ENST00000571272 H0Y9J4 135 aa10.76□□□□□ -0.69
SCARF1-205ENST00000571272 SPRR1BP22528 89 aa10.76□□□□□ -0.69
SCARF1-205ENST00000571272 C1orf195Q5TG92 126 aa10.75□□□□□ -0.69
SCARF1-205ENST00000571272 PANO1I0J062 215 aa10.72□□□□□ -0.69
SCARF1-205ENST00000571272 DNAH7Q8WXX0 4024 aa10.72□□□□□ -0.69
SCARF1-205ENST00000571272 A8MUN3 132 aa10.71□□□□□ -0.69
SCARF1-205ENST00000571272 C14orf177Q52M58 125 aa10.71□□□□□ -0.69
SCARF1-205ENST00000571272 C9orf163Q8N9P6 203 aa10.7□□□□□ -0.7
SCARF1-205ENST00000571272 APLNQ9ULZ1 77 aa10.69□□□□□ -0.7
SCARF1-205ENST00000571272 IGLV9-49A0A0B4J1Y8 123 aa10.68□□□□□ -0.7
SCARF1-205ENST00000571272 MMP24-AS1A0A0U1RRL7 71 aa10.67□□□□□ -0.7
SCARF1-205ENST00000571272 H3BPC8 53 aa10.67□□□□□ -0.7
SCARF1-205ENST00000571272 SPANXA2-OT1Q8N9U9 137 aa10.67□□□□□ -0.7
SCARF1-205ENST00000571272 KRTAP13-1Q8IUC0 172 aa10.62□□□□□ -0.71
SCARF1-205ENST00000571272 V9GYY9 64 aa10.62□□□□□ -0.71
SCARF1-205ENST00000571272 A8MU10 97 aa10.61□□□□□ -0.71
SCARF1-205ENST00000571272 PCOTHQ58A44 107 aa10.61□□□□□ -0.71
SCARF1-205ENST00000571272 Q5VV11 94 aa10.6□□□□□ -0.71
SCARF1-205ENST00000571272 Q8N9P0 234 aaPredicted RBP10.6□□□□□ -0.71
SCARF1-205ENST00000571272 Q96NJ1 140 aa10.59□□□□□ -0.71
SCARF1-205ENST00000571272 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.59□□□□□ -0.71
SCARF1-205ENST00000571272 PLECQ15149 4684 aaKnown RBP10.59□□□□□ -0.71
SCARF1-205ENST00000571272 NBDYA0A0U1RRE5 68 aa10.57□□□□□ -0.72
SCARF1-205ENST00000571272 COA5Q86WW8 74 aa10.55□□□□□ -0.72
SCARF1-205ENST00000571272 PRR15LQ9BU68 103 aa10.55□□□□□ -0.72
SCARF1-205ENST00000571272 CHKB-CPT1BH3BT56 60 aa10.55□□□□□ -0.72
SCARF1-205ENST00000571272 MOBPQ13875 183 aa10.55□□□□□ -0.72
SCARF1-205ENST00000571272 NDUFS5O43920 106 aa10.55□□□□□ -0.72
SCARF1-205ENST00000571272 IGHV6-1A0A0B4J1U7 121 aa10.54□□□□□ -0.72
SCARF1-205ENST00000571272 ANAPC11Q9NYG5 84 aa10.54□□□□□ -0.72
SCARF1-205ENST00000571272 IGLV7-46A0A075B6I9 117 aa10.53□□□□□ -0.72
SCARF1-205ENST00000571272 Q6ZRN7 208 aaPredicted RBP10.53□□□□□ -0.72
SCARF1-205ENST00000571272 C8orf17Q9NRJ1 99 aa10.53□□□□□ -0.72
SCARF1-205ENST00000571272 MDFIQ99750 246 aa10.53□□□□□ -0.72
SCARF1-205ENST00000571272 LIMD2Q9BT23 127 aa10.53□□□□□ -0.72
SCARF1-205ENST00000571272 CD164Q04900 197 aa10.52□□□□□ -0.73
SCARF1-205ENST00000571272 SPACA4Q8TDM5 124 aa10.51□□□□□ -0.73
SCARF1-205ENST00000571272 ASB16-AS1Q495Z4 193 aa10.5□□□□□ -0.73
SCARF1-205ENST00000571272 TP53AIP1Q9HCN2 124 aa10.49□□□□□ -0.73
SCARF1-205ENST00000571272 DYNC2H1Q8NCM8 4307 aaKnown RBP10.49□□□□□ -0.73
SCARF1-205ENST00000571272 FRAS1Q86XX4 4008 aa10.48□□□□□ -0.73
SCARF1-205ENST00000571272 PMAIP1Q13794 54 aa10.48□□□□□ -0.73
SCARF1-205ENST00000571272 A0A087X002 238 aa10.47□□□□□ -0.73
SCARF1-205ENST00000571272 A0A1B0GVX0 72 aa10.47□□□□□ -0.73
SCARF1-205ENST00000571272 NOTCH2NLQ7Z3S9 236 aa10.47□□□□□ -0.73
SCARF1-205ENST00000571272 LINC00483Q53H64 154 aa10.46□□□□□ -0.73
SCARF1-205ENST00000571272 WWC2-AS2Q96NR7 200 aa10.46□□□□□ -0.73
SCARF1-205ENST00000571272 CDK2AP2O75956 126 aa10.46□□□□□ -0.74
SCARF1-205ENST00000571272 PSORS1C2Q9UIG4 136 aa10.45□□□□□ -0.74
SCARF1-205ENST00000571272 Q6ZR54 194 aa10.44□□□□□ -0.74
SCARF1-205ENST00000571272 SPAG11AQ6PDA7 123 aa10.42□□□□□ -0.74
SCARF1-205ENST00000571272 MRPL34Q9BQ48 92 aaKnown RBP10.42□□□□□ -0.74
SCARF1-205ENST00000571272 A0A087WTM6 91 aa10.41□□□□□ -0.74
SCARF1-205ENST00000571272 A6NED7 52 aa10.4□□□□□ -0.74
SCARF1-205ENST00000571272 ZNF706Q9Y5V0 76 aaPredicted RBP10.4□□□□□ -0.74
SCARF1-205ENST00000571272 DNAH8Q96JB1 4490 aa10.4□□□□□ -0.74
SCARF1-205ENST00000571272 IGLV5-52A0A0A0MRZ9 124 aa10.4□□□□□ -0.75
SCARF1-205ENST00000571272 SPINK6Q6UWN8 80 aa10.4□□□□□ -0.75
SCARF1-205ENST00000571272 SPTSSBQ8NFR3 76 aa10.4□□□□□ -0.75
SCARF1-205ENST00000571272 HECTD4Q9Y4D8 3996 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms