RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 EPPK1P58107 5090 aaKnown RBP10.75□□□□□ -0.69
RPAIN-208ENST00000571043 BCE1O60756 84 aa10.74□□□□□ -0.69
RPAIN-208ENST00000571043 KRTAP10-1P60331 282 aa10.74□□□□□ -0.69
RPAIN-208ENST00000571043 HIGD2AQ9BW72 106 aa10.74□□□□□ -0.69
RPAIN-208ENST00000571043 PLAC8Q9NZF1 115 aa10.74□□□□□ -0.69
RPAIN-208ENST00000571043 UBE2AP49459 152 aa10.72□□□□□ -0.69
RPAIN-208ENST00000571043 SMIM29Q86T20 159 aa10.72□□□□□ -0.69
RPAIN-208ENST00000571043 C3orf22Q8N5N4 141 aa10.72□□□□□ -0.69
RPAIN-208ENST00000571043 IGKV3D-7A0A0C4DH55 119 aa10.71□□□□□ -0.69
RPAIN-208ENST00000571043 A0A1B0GW54 56 aa10.7□□□□□ -0.7
RPAIN-208ENST00000571043 Q6ZSA8 131 aa10.7□□□□□ -0.7
RPAIN-208ENST00000571043 Q6ZVQ6 151 aa10.69□□□□□ -0.7
RPAIN-208ENST00000571043 KRTAP13-1Q8IUC0 172 aa10.69□□□□□ -0.7
RPAIN-208ENST00000571043 FAM30AQ9NZY2 134 aa10.69□□□□□ -0.7
RPAIN-208ENST00000571043 SPRR1BP22528 89 aa10.68□□□□□ -0.7
RPAIN-208ENST00000571043 APOBP04114 4563 aaKnown RBP10.68□□□□□ -0.7
RPAIN-208ENST00000571043 F8WEM9 126 aa10.68□□□□□ -0.7
RPAIN-208ENST00000571043 C1orf137Q5JT78 98 aa10.68□□□□□ -0.7
RPAIN-208ENST00000571043 IGLV8-61A0A075B6I0 122 aa10.64□□□□□ -0.71
RPAIN-208ENST00000571043 ANAPC13Q9BS18 74 aa10.64□□□□□ -0.71
RPAIN-208ENST00000571043 FAM236AA0A1B0GUQ0 79 aa10.63□□□□□ -0.71
RPAIN-208ENST00000571043 FAM236BA0A1B0GV22 79 aa10.63□□□□□ -0.71
RPAIN-208ENST00000571043 Q8NBF4 154 aa10.63□□□□□ -0.71
RPAIN-208ENST00000571043 A0A1W2PNM2 257 aa10.63□□□□□ -0.71
RPAIN-208ENST00000571043 CXCL6P80162 114 aa10.62□□□□□ -0.71
RPAIN-208ENST00000571043 HAMPP81172 84 aa10.61□□□□□ -0.71
RPAIN-208ENST00000571043 SPRR4Q96PI1 79 aa10.61□□□□□ -0.71
RPAIN-208ENST00000571043 HIST1H4AP62805 103 aaKnown RBP10.6□□□□□ -0.71
RPAIN-208ENST00000571043 CIRBP-AS1Q8TBR5 109 aa10.6□□□□□ -0.71
RPAIN-208ENST00000571043 PSORS1C2Q9UIG4 136 aa10.6□□□□□ -0.71
RPAIN-208ENST00000571043 SCXQ7RTU7 201 aa10.59□□□□□ -0.71
RPAIN-208ENST00000571043 NREPQ16612 68 aa10.58□□□□□ -0.72
RPAIN-208ENST00000571043 CRYGAP11844 174 aa10.57□□□□□ -0.72
RPAIN-208ENST00000571043 IGFL1Q6UW32 110 aa10.57□□□□□ -0.72
RPAIN-208ENST00000571043 RYR1P21817 5038 aa10.56□□□□□ -0.72
RPAIN-208ENST00000571043 A0A087WVE0 104 aa10.55□□□□□ -0.72
RPAIN-208ENST00000571043 ZNF706Q9Y5V0 76 aaPredicted RBP10.55□□□□□ -0.72
RPAIN-208ENST00000571043 HSPG2P98160 4391 aa10.55□□□□□ -0.72
RPAIN-208ENST00000571043 ZNF861PO60384 105 aa10.54□□□□□ -0.72
RPAIN-208ENST00000571043 VPS13BQ7Z7G8 4022 aa10.53□□□□□ -0.72
RPAIN-208ENST00000571043 ATOX1O00244 68 aa10.53□□□□□ -0.72
RPAIN-208ENST00000571043 CDK2AP2O75956 126 aa10.53□□□□□ -0.72
RPAIN-208ENST00000571043 LINC00483Q53H64 154 aa10.53□□□□□ -0.72
RPAIN-208ENST00000571043 KIAA1109Q2LD37 5005 aa10.52□□□□□ -0.73
RPAIN-208ENST00000571043 BIRC6Q9NR09 4857 aa10.52□□□□□ -0.73
RPAIN-208ENST00000571043 BPY2O14599 106 aa10.49□□□□□ -0.73
RPAIN-208ENST00000571043 FAT1Q14517 4588 aa10.49□□□□□ -0.73
RPAIN-208ENST00000571043 IGLV7-43P04211 117 aa10.48□□□□□ -0.73
RPAIN-208ENST00000571043 A0A0G2JQZ4 141 aa10.47□□□□□ -0.73
RPAIN-208ENST00000571043 RPL37AP61513 92 aaKnown RBP10.46□□□□□ -0.74
RPAIN-208ENST00000571043 SMR3BP02814 79 aaPredicted RBP10.43□□□□□ -0.74
RPAIN-208ENST00000571043 A0A087WSZ3 146 aa10.42□□□□□ -0.74
RPAIN-208ENST00000571043 CCDC179H3BU77 68 aa10.41□□□□□ -0.74
RPAIN-208ENST00000571043 IGKV4-1P06312 121 aa10.41□□□□□ -0.74
RPAIN-208ENST00000571043 IGLV9-49A0A0B4J1Y8 123 aa10.39□□□□□ -0.75
RPAIN-208ENST00000571043 UQCRQO14949 82 aa10.39□□□□□ -0.75
RPAIN-208ENST00000571043 COX7CP15954 63 aa10.39□□□□□ -0.75
RPAIN-208ENST00000571043 C9orf153Q5TBE3 101 aa10.39□□□□□ -0.75
RPAIN-208ENST00000571043 SERP2Q8N6R1 65 aa10.38□□□□□ -0.75
RPAIN-208ENST00000571043 Q8N9L7 120 aa10.37□□□□□ -0.75
RPAIN-208ENST00000571043 DSCR10P59022 87 aa10.36□□□□□ -0.75
RPAIN-208ENST00000571043 SMIM20Q8N5G0 67 aa10.36□□□□□ -0.75
RPAIN-208ENST00000571043 FAM229AH3BQW9 127 aa10.33□□□□□ -0.76
RPAIN-208ENST00000571043 MOBPQ13875 183 aa10.33□□□□□ -0.76
RPAIN-208ENST00000571043 KRTAP17-1Q9BYP8 105 aa10.33□□□□□ -0.76
RPAIN-208ENST00000571043 ANAPC11Q9NYG5 84 aa10.33□□□□□ -0.76
RPAIN-208ENST00000571043 SRRM2Q9UQ35 2752 aaKnown RBP10.32□□□□□ -0.76
RPAIN-208ENST00000571043 KRTAP10-4P60372 401 aaPredicted RBP10.32□□□□□ -0.76
RPAIN-208ENST00000571043 Q8N1X5 172 aa10.31□□□□□ -0.76
RPAIN-208ENST00000571043 TRAV7A0A075B6U4 112 aa10.3□□□□□ -0.76
RPAIN-208ENST00000571043 LINC00472Q9H8W2 130 aa10.3□□□□□ -0.76
RPAIN-208ENST00000571043 PKHD1L1Q86WI1 4243 aa10.3□□□□□ -0.76
RPAIN-208ENST00000571043 HERC2O95714 4834 aa10.29□□□□□ -0.76
RPAIN-208ENST00000571043 K7EQZ3 153 aa10.28□□□□□ -0.76
RPAIN-208ENST00000571043 PLA2G1BP04054 148 aaKnown RBP10.28□□□□□ -0.76
RPAIN-208ENST00000571043 Q5VSD8 79 aa10.28□□□□□ -0.76
RPAIN-208ENST00000571043 SS18L2Q9UHA2 77 aa10.27□□□□□ -0.77
RPAIN-208ENST00000571043 J3KT08 172 aa10.26□□□□□ -0.77
RPAIN-208ENST00000571043 DEFB116Q30KQ4 102 aa10.26□□□□□ -0.77
RPAIN-208ENST00000571043 SSBP3-AS1Q7Z2R9 100 aa10.26□□□□□ -0.77
RPAIN-208ENST00000571043 FAM229BQ4G0N7 80 aa10.23□□□□□ -0.77
RPAIN-208ENST00000571043 A8MWP4 228 aa10.22□□□□□ -0.77
RPAIN-208ENST00000571043 CD164Q04900 197 aa10.22□□□□□ -0.77
RPAIN-208ENST00000571043 HRCT1Q6UXD1 115 aa10.22□□□□□ -0.77
RPAIN-208ENST00000571043 HCG22E2RYF7 251 aa10.2□□□□□ -0.78
RPAIN-208ENST00000571043 SPINK6Q6UWN8 80 aa10.2□□□□□ -0.78
RPAIN-208ENST00000571043 PRR15Q8IV56 129 aa10.2□□□□□ -0.78
RPAIN-208ENST00000571043 Q96NJ1 140 aa10.19□□□□□ -0.78
RPAIN-208ENST00000571043 OCR1Q9BZK8 76 aa10.18□□□□□ -0.78
RPAIN-208ENST00000571043 NDUFB1O75438 58 aa10.15□□□□□ -0.78
RPAIN-208ENST00000571043 KRTAP1-4P0C5Y4 121 aa10.15□□□□□ -0.78
RPAIN-208ENST00000571043 KRTAP4-5Q9BYR2 181 aa10.15□□□□□ -0.78
RPAIN-208ENST00000571043 A0A087X002 238 aa10.14□□□□□ -0.79
RPAIN-208ENST00000571043 KRTAP13-2Q52LG2 175 aa10.14□□□□□ -0.79
RPAIN-208ENST00000571043 C20orf197Q8N268 126 aa10.14□□□□□ -0.79
RPAIN-208ENST00000571043 KRTAP29-1A8MX34 341 aaPredicted RBP10.12□□□□□ -0.79
RPAIN-208ENST00000571043 FLG2Q5D862 2391 aaPredicted RBP10.11□□□□□ -0.79
RPAIN-208ENST00000571043 ASB16-AS1Q495Z4 193 aa10.11□□□□□ -0.79
RPAIN-208ENST00000571043 ABCA13Q86UQ4 5058 aa10.11□□□□□ -0.79
RPAIN-208ENST00000571043 KLKP1Q107X0 134 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms