RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 COL5A1-AS1Q5SY13 56 aa6.99□□□□□ -1.29
CTDNEP1-205ENST00000570828 SPANXDQ9BXN6 97 aa6.99□□□□□ -1.29
CTDNEP1-205ENST00000570828 MUC17Q685J3 4493 aa6.98□□□□□ -1.29
CTDNEP1-205ENST00000570828 C20orf202A1L168 122 aa6.98□□□□□ -1.29
CTDNEP1-205ENST00000570828 ST20-AS1Q8NBB2 130 aa6.98□□□□□ -1.29
CTDNEP1-205ENST00000570828 TTTY13Q9BZ97 58 aa6.98□□□□□ -1.29
CTDNEP1-205ENST00000570828 SEC61BP60468 96 aaKnown RBP6.97□□□□□ -1.29
CTDNEP1-205ENST00000570828 KRTAP13-3Q3SY46 172 aa6.97□□□□□ -1.29
CTDNEP1-205ENST00000570828 VAMP8Q9BV40 100 aa6.97□□□□□ -1.29
CTDNEP1-205ENST00000570828 DHRS4-AS1Q9P1J3 65 aa6.97□□□□□ -1.29
CTDNEP1-205ENST00000570828 SLC25A20O43772 301 aa6.96□□□□□ -1.3
CTDNEP1-205ENST00000570828 SCGB1D4Q6XE38 83 aa6.96□□□□□ -1.3
CTDNEP1-205ENST00000570828 Q8N377 158 aa6.96□□□□□ -1.3
CTDNEP1-205ENST00000570828 FAT4Q6V0I7 4981 aa6.96□□□□□ -1.3
CTDNEP1-205ENST00000570828 DLEU1O43261 78 aa6.95□□□□□ -1.3
CTDNEP1-205ENST00000570828 SLC25A34Q6PIV7 304 aa6.95□□□□□ -1.3
CTDNEP1-205ENST00000570828 COPS9Q8WXC6 57 aa6.95□□□□□ -1.3
CTDNEP1-205ENST00000570828 COX7BP24311 80 aa6.94□□□□□ -1.3
CTDNEP1-205ENST00000570828 UQCR10Q9UDW1 63 aa6.94□□□□□ -1.3
CTDNEP1-205ENST00000570828 ELOF1P60002 83 aaKnown RBP6.93□□□□□ -1.3
CTDNEP1-205ENST00000570828 C6orf99Q4VX62 202 aa6.93□□□□□ -1.3
CTDNEP1-205ENST00000570828 SPRR1BP22528 89 aa6.92□□□□□ -1.3
CTDNEP1-205ENST00000570828 SNHG12Q9BXW3 62 aa6.92□□□□□ -1.3
CTDNEP1-205ENST00000570828 PAM16Q9Y3D7 125 aa6.92□□□□□ -1.3
CTDNEP1-205ENST00000570828 IFITM1P13164 125 aa6.91□□□□□ -1.3
CTDNEP1-205ENST00000570828 ATOH7Q8N100 152 aa6.91□□□□□ -1.3
CTDNEP1-205ENST00000570828 LAMTOR3Q9UHA4 124 aa6.91□□□□□ -1.3
CTDNEP1-205ENST00000570828 ASB16-AS1Q495Z4 193 aa6.9□□□□□ -1.3
CTDNEP1-205ENST00000570828 Q6ZVH6 145 aa6.9□□□□□ -1.3
CTDNEP1-205ENST00000570828 LIMD2Q9BT23 127 aa6.9□□□□□ -1.3
CTDNEP1-205ENST00000570828 TRBV7-6A0A0J9YX20 115 aa6.89□□□□□ -1.31
CTDNEP1-205ENST00000570828 A0A1B0GWB2 263 aa6.88□□□□□ -1.31
CTDNEP1-205ENST00000570828 A6NDN8 102 aa6.88□□□□□ -1.31
CTDNEP1-205ENST00000570828 TAL2Q16559 108 aa6.88□□□□□ -1.31
CTDNEP1-205ENST00000570828 HRCT1Q6UXD1 115 aa6.88□□□□□ -1.31
CTDNEP1-205ENST00000570828 PCP2Q8IVA1 136 aa6.88□□□□□ -1.31
CTDNEP1-205ENST00000570828 DEFB105AQ8NG35 78 aa6.88□□□□□ -1.31
CTDNEP1-205ENST00000570828 Q1RN00 199 aa6.87□□□□□ -1.31
CTDNEP1-205ENST00000570828 C5orf47Q569G3 176 aa6.87□□□□□ -1.31
CTDNEP1-205ENST00000570828 TEX49A0A1B0GTD5 131 aa6.86□□□□□ -1.31
CTDNEP1-205ENST00000570828 MUSTN1Q8IVN3 82 aa6.86□□□□□ -1.31
CTDNEP1-205ENST00000570828 TRAV13-2A0A0B4J235 113 aa6.84□□□□□ -1.31
CTDNEP1-205ENST00000570828 SPATA45Q537H7 98 aa6.84□□□□□ -1.31
CTDNEP1-205ENST00000570828 CD164Q04900 197 aa6.83□□□□□ -1.32
CTDNEP1-205ENST00000570828 BATFQ16520 125 aa6.83□□□□□ -1.32
CTDNEP1-205ENST00000570828 NHP2Q9NX24 153 aaKnown RBP6.83□□□□□ -1.32
CTDNEP1-205ENST00000570828 H7C2G1 150 aa6.82□□□□□ -1.32
CTDNEP1-205ENST00000570828 IGLV5-48A0A075B6I7 105 aa6.81□□□□□ -1.32
CTDNEP1-205ENST00000570828 SMIM11BQ8TCY0 68 aa6.81□□□□□ -1.32
CTDNEP1-205ENST00000570828 LINC01547P58512 204 aaPredicted RBP6.8□□□□□ -1.32
CTDNEP1-205ENST00000570828 SMIM29Q86T20 159 aa6.8□□□□□ -1.32
CTDNEP1-205ENST00000570828 KRTAP4-1Q9BYQ7 146 aa6.79□□□□□ -1.32
CTDNEP1-205ENST00000570828 K7ERU9 68 aa6.78□□□□□ -1.32
CTDNEP1-205ENST00000570828 C9orf92A6NGG3 77 aa6.77□□□□□ -1.33
CTDNEP1-205ENST00000570828 F8WEM9 126 aa6.76□□□□□ -1.33
CTDNEP1-205ENST00000570828 Q5XG85 94 aa6.76□□□□□ -1.33
CTDNEP1-205ENST00000570828 GTF2H5Q6ZYL4 71 aa6.76□□□□□ -1.33
CTDNEP1-205ENST00000570828 A0A0G2JQZ4 141 aa6.75□□□□□ -1.33
CTDNEP1-205ENST00000570828 LINC00575Q6W349 94 aa6.74□□□□□ -1.33
CTDNEP1-205ENST00000570828 C1orf195Q5TG92 126 aa6.73□□□□□ -1.33
CTDNEP1-205ENST00000570828 VPS25Q9BRG1 176 aa6.73□□□□□ -1.33
CTDNEP1-205ENST00000570828 V9GYY9 64 aa6.73□□□□□ -1.33
CTDNEP1-205ENST00000570828 hADV29S1A0JD25 119 aa6.72□□□□□ -1.33
CTDNEP1-205ENST00000570828 TCL1BO95988 128 aa6.72□□□□□ -1.33
CTDNEP1-205ENST00000570828 PCOTHQ58A44 107 aa6.72□□□□□ -1.33
CTDNEP1-205ENST00000570828 Q6ZQY7 126 aa6.72□□□□□ -1.33
CTDNEP1-205ENST00000570828 Q6ZVQ6 151 aa6.72□□□□□ -1.33
CTDNEP1-205ENST00000570828 HIST1H4GQ99525 98 aa6.72□□□□□ -1.33
CTDNEP1-205ENST00000570828 IGLV8-61A0A075B6I0 122 aa6.7□□□□□ -1.34
CTDNEP1-205ENST00000570828 J3QR89 54 aa6.7□□□□□ -1.34
CTDNEP1-205ENST00000570828 BVES-AS1Q5T3Y7 98 aa6.69□□□□□ -1.34
CTDNEP1-205ENST00000570828 Q6JHZ5 121 aa6.69□□□□□ -1.34
CTDNEP1-205ENST00000570828 COX8AP10176 69 aa6.68□□□□□ -1.34
CTDNEP1-205ENST00000570828 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.68□□□□□ -1.34
CTDNEP1-205ENST00000570828 CLEC2BQ92478 149 aa6.68□□□□□ -1.34
CTDNEP1-205ENST00000570828 OCIAD2Q56VL3 154 aa6.67□□□□□ -1.34
CTDNEP1-205ENST00000570828 PPDPFLQ8WWR9 84 aa6.66□□□□□ -1.34
CTDNEP1-205ENST00000570828 TRBV7-7A0A0K0K1E9 115 aa6.65□□□□□ -1.34
CTDNEP1-205ENST00000570828 SCGB1A1P11684 91 aa6.65□□□□□ -1.34
CTDNEP1-205ENST00000570828 HSD52Q0P140 79 aa6.65□□□□□ -1.34
CTDNEP1-205ENST00000570828 IGFL1Q6UW32 110 aa6.65□□□□□ -1.34
CTDNEP1-205ENST00000570828 RPL37P61927 97 aaKnown RBP6.64□□□□□ -1.35
CTDNEP1-205ENST00000570828 MTURNQ8N3F0 131 aa6.64□□□□□ -1.35
CTDNEP1-205ENST00000570828 RAB37Q96AX2 223 aa6.64□□□□□ -1.35
CTDNEP1-205ENST00000570828 TAX1BP3O14907 124 aa6.63□□□□□ -1.35
CTDNEP1-205ENST00000570828 KRTAP15-1Q3LI76 137 aa6.63□□□□□ -1.35
CTDNEP1-205ENST00000570828 SNCGO76070 127 aa6.62□□□□□ -1.35
CTDNEP1-205ENST00000570828 CFC1BP0CG36 223 aa6.61□□□□□ -1.35
CTDNEP1-205ENST00000570828 CFC1P0CG37 223 aa6.61□□□□□ -1.35
CTDNEP1-205ENST00000570828 FABP2P12104 132 aa6.61□□□□□ -1.35
CTDNEP1-205ENST00000570828 KRTAP19-2Q3LHN2 52 aa6.61□□□□□ -1.35
CTDNEP1-205ENST00000570828 HIGD1BQ9P298 99 aa6.61□□□□□ -1.35
CTDNEP1-205ENST00000570828 A0A0B4J2C4 111 aa6.6□□□□□ -1.35
CTDNEP1-205ENST00000570828 H3BUT2 72 aa6.6□□□□□ -1.35
CTDNEP1-205ENST00000570828 H0YGX0 51 aa6.59□□□□□ -1.35
CTDNEP1-205ENST00000570828 K7EP34 96 aa6.59□□□□□ -1.35
CTDNEP1-205ENST00000570828 MT1HP80294 61 aa6.58□□□□□ -1.36
CTDNEP1-205ENST00000570828 LYRM7Q5U5X0 104 aa6.58□□□□□ -1.36
CTDNEP1-205ENST00000570828 A0A1B0GV72 72 aa6.57□□□□□ -1.36
CTDNEP1-205ENST00000570828 LST1O00453 97 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms