RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 Q6ZQY7 126 aa5.5□□□□□ -1.53
GTF3C1-212ENST00000570129 hADV29S1A0JD25 119 aa5.49□□□□□ -1.53
GTF3C1-212ENST00000570129 SPINK1P00995 79 aa5.49□□□□□ -1.53
GTF3C1-212ENST00000570129 RAB37Q96AX2 223 aa5.49□□□□□ -1.53
GTF3C1-212ENST00000570129 LAMTOR3Q9UHA4 124 aa5.49□□□□□ -1.53
GTF3C1-212ENST00000570129 A0A0B4J2C4 111 aa5.47□□□□□ -1.53
GTF3C1-212ENST00000570129 VAMP3Q15836 100 aa5.47□□□□□ -1.53
GTF3C1-212ENST00000570129 KRTAP13-3Q3SY46 172 aa5.47□□□□□ -1.53
GTF3C1-212ENST00000570129 MUC2Q02817 5179 aa5.46□□□□□ -1.54
GTF3C1-212ENST00000570129 CLEC2BQ92478 149 aa5.46□□□□□ -1.54
GTF3C1-212ENST00000570129 NHP2Q9NX24 153 aaKnown RBP5.46□□□□□ -1.54
GTF3C1-212ENST00000570129 PRO1854Q9UHT4 67 aa5.46□□□□□ -1.54
GTF3C1-212ENST00000570129 LOC105371267A0A1B0GV96 52 aa5.45□□□□□ -1.54
GTF3C1-212ENST00000570129 H3BUT2 72 aa5.45□□□□□ -1.54
GTF3C1-212ENST00000570129 TRIAP1O43715 76 aa5.45□□□□□ -1.54
GTF3C1-212ENST00000570129 HSD52Q0P140 79 aa5.45□□□□□ -1.54
GTF3C1-212ENST00000570129 BVES-AS1Q5T3Y7 98 aa5.45□□□□□ -1.54
GTF3C1-212ENST00000570129 UQCR10Q9UDW1 63 aa5.45□□□□□ -1.54
GTF3C1-212ENST00000570129 SLC25A20O43772 301 aa5.44□□□□□ -1.54
GTF3C1-212ENST00000570129 TPRXLQ17RH7 258 aa5.44□□□□□ -1.54
GTF3C1-212ENST00000570129 KRTAP4-1Q9BYQ7 146 aa5.44□□□□□ -1.54
GTF3C1-212ENST00000570129 MUC17Q685J3 4493 aa5.44□□□□□ -1.54
GTF3C1-212ENST00000570129 CTAG1AP78358 180 aa5.42□□□□□ -1.54
GTF3C1-212ENST00000570129 OCIAD2Q56VL3 154 aa5.42□□□□□ -1.54
GTF3C1-212ENST00000570129 IGFL1Q6UW32 110 aa5.42□□□□□ -1.54
GTF3C1-212ENST00000570129 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.42□□□□□ -1.54
GTF3C1-212ENST00000570129 RPS29P62273 56 aaKnown RBP5.41□□□□□ -1.54
GTF3C1-212ENST00000570129 C1orf195Q5TG92 126 aa5.41□□□□□ -1.54
GTF3C1-212ENST00000570129 FP248Q71RG6 208 aaPredicted RBP5.41□□□□□ -1.54
GTF3C1-212ENST00000570129 NAA38Q9BRA0 125 aaKnown RBP5.41□□□□□ -1.54
GTF3C1-212ENST00000570129 A0A1B0GV72 72 aa5.4□□□□□ -1.54
GTF3C1-212ENST00000570129 C9orf92A6NGG3 77 aa5.4□□□□□ -1.54
GTF3C1-212ENST00000570129 IGLV8-61A0A075B6I0 122 aa5.39□□□□□ -1.55
GTF3C1-212ENST00000570129 H0YGX0 51 aa5.39□□□□□ -1.55
GTF3C1-212ENST00000570129 SNHG12Q9BXW3 62 aa5.39□□□□□ -1.55
GTF3C1-212ENST00000570129 PSMB2P49721 201 aa5.38□□□□□ -1.55
GTF3C1-212ENST00000570129 CD164Q04900 197 aa5.38□□□□□ -1.55
GTF3C1-212ENST00000570129 NDUFV3P56181 108 aaKnown RBP5.37□□□□□ -1.55
GTF3C1-212ENST00000570129 XP32Q5T750 250 aa5.37□□□□□ -1.55
GTF3C1-212ENST00000570129 F8WEM9 126 aa5.36□□□□□ -1.55
GTF3C1-212ENST00000570129 FABP2P12104 132 aa5.36□□□□□ -1.55
GTF3C1-212ENST00000570129 TRBV7-7A0A0K0K1E9 115 aa5.35□□□□□ -1.55
GTF3C1-212ENST00000570129 SMIM6P0DI80 62 aa5.35□□□□□ -1.55
GTF3C1-212ENST00000570129 Q5XG85 94 aa5.34□□□□□ -1.55
GTF3C1-212ENST00000570129 LIMD2Q9BT23 127 aa5.34□□□□□ -1.55
GTF3C1-212ENST00000570129 A0A1W2PNM2 257 aa5.33□□□□□ -1.56
GTF3C1-212ENST00000570129 H3BMG7 143 aa5.33□□□□□ -1.56
GTF3C1-212ENST00000570129 ASB16-AS1Q495Z4 193 aa5.32□□□□□ -1.56
GTF3C1-212ENST00000570129 Q6JHZ5 121 aa5.32□□□□□ -1.56
GTF3C1-212ENST00000570129 FAT4Q6V0I7 4981 aa5.32□□□□□ -1.56
GTF3C1-212ENST00000570129 SCGB1C2P0DMR2 95 aa5.31□□□□□ -1.56
GTF3C1-212ENST00000570129 BATFQ16520 125 aa5.31□□□□□ -1.56
GTF3C1-212ENST00000570129 PPDPFLQ8WWR9 84 aa5.31□□□□□ -1.56
GTF3C1-212ENST00000570129 A0A1B0GX51 115 aa5.3□□□□□ -1.56
GTF3C1-212ENST00000570129 PCOTHQ58A44 107 aa5.3□□□□□ -1.56
GTF3C1-212ENST00000570129 LST1O00453 97 aa5.29□□□□□ -1.56
GTF3C1-212ENST00000570129 TCL1BO95988 128 aa5.29□□□□□ -1.56
GTF3C1-212ENST00000570129 ORMDL1Q9P0S3 153 aa5.29□□□□□ -1.56
GTF3C1-212ENST00000570129 A0A087WSZ3 146 aa5.28□□□□□ -1.56
GTF3C1-212ENST00000570129 Q96NJ1 140 aa5.28□□□□□ -1.56
GTF3C1-212ENST00000570129 SNCGO76070 127 aa5.27□□□□□ -1.57
GTF3C1-212ENST00000570129 COX6CP09669 75 aa5.27□□□□□ -1.57
GTF3C1-212ENST00000570129 BAALC-AS2P0C853 105 aa5.27□□□□□ -1.57
GTF3C1-212ENST00000570129 M0R143 59 aa5.26□□□□□ -1.57
GTF3C1-212ENST00000570129 TRACP01848 142 aa5.26□□□□□ -1.57
GTF3C1-212ENST00000570129 DEFB116Q30KQ4 102 aa5.26□□□□□ -1.57
GTF3C1-212ENST00000570129 TEN1Q86WV5 123 aa5.26□□□□□ -1.57
GTF3C1-212ENST00000570129 DNAL4O96015 105 aa5.25□□□□□ -1.57
GTF3C1-212ENST00000570129 Q6Q795 121 aa5.25□□□□□ -1.57
GTF3C1-212ENST00000570129 ANKRD29Q8N6D5 301 aa5.25□□□□□ -1.57
GTF3C1-212ENST00000570129 OBSCN-AS1Q96MR7 158 aa5.25□□□□□ -1.57
GTF3C1-212ENST00000570129 TSTD3H0UI37 97 aa5.24□□□□□ -1.57
GTF3C1-212ENST00000570129 TAX1BP3O14907 124 aa5.24□□□□□ -1.57
GTF3C1-212ENST00000570129 SEC61BP60468 96 aaKnown RBP5.24□□□□□ -1.57
GTF3C1-212ENST00000570129 TMEM256-PLSCR3K7ERE1 68 aa5.23□□□□□ -1.57
GTF3C1-212ENST00000570129 KRTAP19-2Q3LHN2 52 aa5.23□□□□□ -1.57
GTF3C1-212ENST00000570129 NOTCH2NLQ7Z3S9 236 aa5.23□□□□□ -1.57
GTF3C1-212ENST00000570129 UBE2V1Q13404 147 aa5.22□□□□□ -1.57
GTF3C1-212ENST00000570129 MTURNQ8N3F0 131 aa5.22□□□□□ -1.57
GTF3C1-212ENST00000570129 TRBV7-4A0A0J9YYF1 115 aa5.21□□□□□ -1.58
GTF3C1-212ENST00000570129 LOC100996750A0A140TA64 210 aa5.21□□□□□ -1.58
GTF3C1-212ENST00000570129 CCKP06307 115 aa5.21□□□□□ -1.58
GTF3C1-212ENST00000570129 DSCR10P59022 87 aa5.21□□□□□ -1.58
GTF3C1-212ENST00000570129 RPL37P61927 97 aaKnown RBP5.21□□□□□ -1.58
GTF3C1-212ENST00000570129 VPS25Q9BRG1 176 aa5.21□□□□□ -1.58
GTF3C1-212ENST00000570129 KRTAP4-6Q9BYQ5 205 aa5.21□□□□□ -1.58
GTF3C1-212ENST00000570129 ATXN8Q156A1 80 aa5.2□□□□□ -1.58
GTF3C1-212ENST00000570129 C9orf118A6NHY6 69 aa5.19□□□□□ -1.58
GTF3C1-212ENST00000570129 C9JAW5 83 aa5.19□□□□□ -1.58
GTF3C1-212ENST00000570129 LINC00472Q9H8W2 130 aa5.19□□□□□ -1.58
GTF3C1-212ENST00000570129 RBM3P98179 157 aaKnown RBP5.18□□□□□ -1.58
GTF3C1-212ENST00000570129 IGKV4-1P06312 121 aa5.17□□□□□ -1.58
GTF3C1-212ENST00000570129 A0A1W2PPM0 123 aa5.16□□□□□ -1.58
GTF3C1-212ENST00000570129 KRTAP16-1A8MUX0 517 aa5.16□□□□□ -1.58
GTF3C1-212ENST00000570129 SIGMAR1Q99720 223 aa5.16□□□□□ -1.58
GTF3C1-212ENST00000570129 C14orf132Q9NPU4 83 aa5.16□□□□□ -1.58
GTF3C1-212ENST00000570129 H3BQ85 93 aa5.15□□□□□ -1.59
GTF3C1-212ENST00000570129 Q6ZQT0 140 aa5.15□□□□□ -1.59
GTF3C1-212ENST00000570129 SS18L2Q9UHA2 77 aa5.15□□□□□ -1.59
GTF3C1-212ENST00000570129 PCP4L1A6NKN8 68 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 163.7 ms