RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 HIST1H2BCP62807 126 aa6.16□□□□□ -1.42
CAPN3-220ENST00000569827 HIST2H2BEQ16778 126 aa6.16□□□□□ -1.42
CAPN3-220ENST00000569827 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.16□□□□□ -1.42
CAPN3-220ENST00000569827 ATOH7Q8N100 152 aa6.16□□□□□ -1.42
CAPN3-220ENST00000569827 HIST1H2BHQ93079 126 aa6.16□□□□□ -1.42
CAPN3-220ENST00000569827 Q96NJ1 140 aa6.16□□□□□ -1.42
CAPN3-220ENST00000569827 HIST1H2BNQ99877 126 aa6.16□□□□□ -1.42
CAPN3-220ENST00000569827 HIST1H2BMQ99879 126 aa6.16□□□□□ -1.42
CAPN3-220ENST00000569827 KRTDAPP60985 99 aa6.15□□□□□ -1.42
CAPN3-220ENST00000569827 Q6ZQY7 126 aa6.15□□□□□ -1.42
CAPN3-220ENST00000569827 SLC7A5P1Q8MH63 180 aa6.15□□□□□ -1.42
CAPN3-220ENST00000569827 CLEC2BQ92478 149 aa6.15□□□□□ -1.42
CAPN3-220ENST00000569827 NHP2Q9NX24 153 aaKnown RBP6.15□□□□□ -1.42
CAPN3-220ENST00000569827 A4D1N5 150 aa6.14□□□□□ -1.43
CAPN3-220ENST00000569827 MT2AP02795 61 aa6.13□□□□□ -1.43
CAPN3-220ENST00000569827 IFITM1P13164 125 aa6.13□□□□□ -1.43
CAPN3-220ENST00000569827 KRTAP19-1Q8IUB9 90 aa6.13□□□□□ -1.43
CAPN3-220ENST00000569827 C20orf202A1L168 122 aa6.12□□□□□ -1.43
CAPN3-220ENST00000569827 H3BUT2 72 aa6.12□□□□□ -1.43
CAPN3-220ENST00000569827 LINC00575Q6W349 94 aa6.12□□□□□ -1.43
CAPN3-220ENST00000569827 TRAV13-2A0A0B4J235 113 aa6.11□□□□□ -1.43
CAPN3-220ENST00000569827 Q6JHZ5 121 aa6.11□□□□□ -1.43
CAPN3-220ENST00000569827 COPS9Q8WXC6 57 aa6.11□□□□□ -1.43
CAPN3-220ENST00000569827 hADV29S1A0JD25 119 aa6.1□□□□□ -1.43
CAPN3-220ENST00000569827 MT1FP04733 61 aa6.1□□□□□ -1.43
CAPN3-220ENST00000569827 OCIAD2Q56VL3 154 aa6.1□□□□□ -1.43
CAPN3-220ENST00000569827 MACF1Q9UPN3 7388 aaKnown RBP6.1□□□□□ -1.43
CAPN3-220ENST00000569827 LST1O00453 97 aa6.09□□□□□ -1.43
CAPN3-220ENST00000569827 Q6ZVH6 145 aa6.08□□□□□ -1.44
CAPN3-220ENST00000569827 C20orf166-AS1Q96NR2 134 aa6.08□□□□□ -1.44
CAPN3-220ENST00000569827 TRBV20-1A0A075B6N2 111 aa6.07□□□□□ -1.44
CAPN3-220ENST00000569827 A8MUU9 505 aa6.07□□□□□ -1.44
CAPN3-220ENST00000569827 VAMP3Q15836 100 aa6.07□□□□□ -1.44
CAPN3-220ENST00000569827 FAM236DA0A1B0GTK5 79 aa6.06□□□□□ -1.44
CAPN3-220ENST00000569827 FAM236CP0DP71 79 aa6.06□□□□□ -1.44
CAPN3-220ENST00000569827 DSCR10P59022 87 aa6.06□□□□□ -1.44
CAPN3-220ENST00000569827 C12orf57Q99622 126 aa6.06□□□□□ -1.44
CAPN3-220ENST00000569827 KRTAP16-1A8MUX0 517 aa6.05□□□□□ -1.44
CAPN3-220ENST00000569827 KRTAP9-3Q9BYQ3 159 aa6.04□□□□□ -1.44
CAPN3-220ENST00000569827 KRTAP10-10P60014 251 aa6.03□□□□□ -1.44
CAPN3-220ENST00000569827 SNHG12Q9BXW3 62 aa6.03□□□□□ -1.44
CAPN3-220ENST00000569827 SYNE2Q8WXH0 6885 aaKnown RBP6.03□□□□□ -1.44
CAPN3-220ENST00000569827 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.02□□□□□ -1.45
CAPN3-220ENST00000569827 A0A087WSZ3 146 aa6□□□□□ -1.45
CAPN3-220ENST00000569827 COA6Q5JTJ3 125 aaKnown RBP5.99□□□□□ -1.45
CAPN3-220ENST00000569827 SIGMAR1Q99720 223 aa5.99□□□□□ -1.45
CAPN3-220ENST00000569827 SS18L2Q9UHA2 77 aa5.99□□□□□ -1.45
CAPN3-220ENST00000569827 HRES1P13985 223 aa5.98□□□□□ -1.45
CAPN3-220ENST00000569827 LOC100996750A0A140TA64 210 aa5.97□□□□□ -1.45
CAPN3-220ENST00000569827 KRTAP4-6Q9BYQ5 205 aa5.97□□□□□ -1.45
CAPN3-220ENST00000569827 PPDPFLQ8WWR9 84 aa5.96□□□□□ -1.46
CAPN3-220ENST00000569827 SCGB1D1O95968 90 aa5.95□□□□□ -1.46
CAPN3-220ENST00000569827 BVES-AS1Q5T3Y7 98 aa5.95□□□□□ -1.46
CAPN3-220ENST00000569827 NOTCH2NLQ7Z3S9 236 aa5.95□□□□□ -1.46
CAPN3-220ENST00000569827 TEN1Q86WV5 123 aa5.95□□□□□ -1.46
CAPN3-220ENST00000569827 FAM218AQ96MZ4 157 aa5.95□□□□□ -1.46
CAPN3-220ENST00000569827 NDUFV3P56181 108 aaKnown RBP5.94□□□□□ -1.46
CAPN3-220ENST00000569827 MPLKIPQ8TAP9 179 aa5.94□□□□□ -1.46
CAPN3-220ENST00000569827 A0A1B0GV72 72 aa5.93□□□□□ -1.46
CAPN3-220ENST00000569827 RBM12B-AS1Q9P1G2 102 aa5.93□□□□□ -1.46
CAPN3-220ENST00000569827 DEFB116Q30KQ4 102 aa5.92□□□□□ -1.46
CAPN3-220ENST00000569827 A0A1W2PNM2 257 aa5.91□□□□□ -1.46
CAPN3-220ENST00000569827 LINC00313P59037 77 aa5.91□□□□□ -1.46
CAPN3-220ENST00000569827 HIST1H4GQ99525 98 aa5.91□□□□□ -1.46
CAPN3-220ENST00000569827 H3BMG7 143 aa5.9□□□□□ -1.46
CAPN3-220ENST00000569827 IGKV4-1P06312 121 aa5.9□□□□□ -1.46
CAPN3-220ENST00000569827 SNRPEP62304 92 aaKnown RBP5.9□□□□□ -1.46
CAPN3-220ENST00000569827 HSBP1L1C9JCN9 74 aa5.89□□□□□ -1.47
CAPN3-220ENST00000569827 KRTAP19-6Q3LI70 58 aa5.88□□□□□ -1.47
CAPN3-220ENST00000569827 FABP2P12104 132 aa5.87□□□□□ -1.47
CAPN3-220ENST00000569827 IGHV6-1A0A0B4J1U7 121 aa5.86□□□□□ -1.47
CAPN3-220ENST00000569827 HIST3H2BBQ8N257 126 aa5.86□□□□□ -1.47
CAPN3-220ENST00000569827 HIST1H2BLQ99880 126 aa5.86□□□□□ -1.47
CAPN3-220ENST00000569827 RAB37Q96AX2 223 aa5.85□□□□□ -1.47
CAPN3-220ENST00000569827 S100A2P29034 98 aa5.83□□□□□ -1.48
CAPN3-220ENST00000569827 H0YGX0 51 aa5.82□□□□□ -1.48
CAPN3-220ENST00000569827 SNCGO76070 127 aa5.82□□□□□ -1.48
CAPN3-220ENST00000569827 COX8AP10176 69 aa5.81□□□□□ -1.48
CAPN3-220ENST00000569827 Q8N9P0 234 aaPredicted RBP5.81□□□□□ -1.48
CAPN3-220ENST00000569827 A0A0B4J2C4 111 aa5.8□□□□□ -1.48
CAPN3-220ENST00000569827 ANKRD29Q8N6D5 301 aa5.8□□□□□ -1.48
CAPN3-220ENST00000569827 LINC00472Q9H8W2 130 aa5.8□□□□□ -1.48
CAPN3-220ENST00000569827 LINC00846Q9NV44 126 aa5.8□□□□□ -1.48
CAPN3-220ENST00000569827 C14orf144Q96I85 54 aa5.79□□□□□ -1.48
CAPN3-220ENST00000569827 TRBV7-4A0A0J9YYF1 115 aa5.77□□□□□ -1.49
CAPN3-220ENST00000569827 TRIAP1O43715 76 aa5.77□□□□□ -1.49
CAPN3-220ENST00000569827 SPINK7P58062 85 aa5.77□□□□□ -1.49
CAPN3-220ENST00000569827 KRTAP6-3Q3LI67 103 aa5.77□□□□□ -1.49
CAPN3-220ENST00000569827 MTURNQ8N3F0 131 aa5.77□□□□□ -1.49
CAPN3-220ENST00000569827 ZCCHC13Q8WW36 166 aaKnown RBP5.77□□□□□ -1.49
CAPN3-220ENST00000569827 CCKP06307 115 aa5.76□□□□□ -1.49
CAPN3-220ENST00000569827 A0A1B0GVX0 72 aa5.75□□□□□ -1.49
CAPN3-220ENST00000569827 TRACP01848 142 aa5.75□□□□□ -1.49
CAPN3-220ENST00000569827 SMCPP49901 116 aaPredicted RBP5.75□□□□□ -1.49
CAPN3-220ENST00000569827 C2orf91Q6ZV80 131 aa5.75□□□□□ -1.49
CAPN3-220ENST00000569827 WFDC13Q8IUB5 93 aa5.75□□□□□ -1.49
CAPN3-220ENST00000569827 VPS25Q9BRG1 176 aa5.75□□□□□ -1.49
CAPN3-220ENST00000569827 TMA7Q9Y2S6 64 aaKnown RBP5.75□□□□□ -1.49
CAPN3-220ENST00000569827 A0A1B0GX51 115 aa5.74□□□□□ -1.49
CAPN3-220ENST00000569827 PRO1854Q9UHT4 67 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms