RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 IGLV5-48A0A075B6I7 105 aa7.62□□□□□ -1.19
GTF3C1-211ENST00000569653 Q1RN00 199 aa7.62□□□□□ -1.19
GTF3C1-211ENST00000569653 KRTAP9-6A0A140TA67 174 aa7.61□□□□□ -1.19
GTF3C1-211ENST00000569653 SEC61BP60468 96 aaKnown RBP7.61□□□□□ -1.19
GTF3C1-211ENST00000569653 KRTAP19-2Q3LHN2 52 aa7.61□□□□□ -1.19
GTF3C1-211ENST00000569653 LCE2CQ5TA81 110 aa7.61□□□□□ -1.19
GTF3C1-211ENST00000569653 RAB37Q96AX2 223 aa7.61□□□□□ -1.19
GTF3C1-211ENST00000569653 TMEM238LA0A1B0GVL6 79 aa7.6□□□□□ -1.19
GTF3C1-211ENST00000569653 A6NJY4 79 aa7.6□□□□□ -1.19
GTF3C1-211ENST00000569653 H7C2G1 150 aa7.6□□□□□ -1.19
GTF3C1-211ENST00000569653 K7ERJ3 54 aa7.6□□□□□ -1.19
GTF3C1-211ENST00000569653 BVES-AS1Q5T3Y7 98 aa7.6□□□□□ -1.19
GTF3C1-211ENST00000569653 LINC00575Q6W349 94 aa7.6□□□□□ -1.19
GTF3C1-211ENST00000569653 PRO1854Q9UHT4 67 aa7.6□□□□□ -1.19
GTF3C1-211ENST00000569653 LINC01547P58512 204 aaPredicted RBP7.59□□□□□ -1.19
GTF3C1-211ENST00000569653 LIMD2Q9BT23 127 aa7.59□□□□□ -1.19
GTF3C1-211ENST00000569653 hADV29S1A0JD25 119 aa7.58□□□□□ -1.2
GTF3C1-211ENST00000569653 SMIM29Q86T20 159 aa7.58□□□□□ -1.2
GTF3C1-211ENST00000569653 HRCT1Q6UXD1 115 aa7.57□□□□□ -1.2
GTF3C1-211ENST00000569653 CD164Q04900 197 aa7.56□□□□□ -1.2
GTF3C1-211ENST00000569653 Q6ZQY7 126 aa7.56□□□□□ -1.2
GTF3C1-211ENST00000569653 F8WEM9 126 aa7.55□□□□□ -1.2
GTF3C1-211ENST00000569653 TSTD3H0UI37 97 aa7.54□□□□□ -1.2
GTF3C1-211ENST00000569653 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.54□□□□□ -1.2
GTF3C1-211ENST00000569653 FAM218AQ96MZ4 157 aa7.54□□□□□ -1.2
GTF3C1-211ENST00000569653 A0A0G2JQZ4 141 aa7.53□□□□□ -1.2
GTF3C1-211ENST00000569653 TRIAP1O43715 76 aa7.53□□□□□ -1.2
GTF3C1-211ENST00000569653 SNCGO76070 127 aa7.52□□□□□ -1.21
GTF3C1-211ENST00000569653 PPDPFLQ8WWR9 84 aa7.52□□□□□ -1.21
GTF3C1-211ENST00000569653 C9orf92A6NGG3 77 aa7.51□□□□□ -1.21
GTF3C1-211ENST00000569653 PCOTHQ58A44 107 aa7.51□□□□□ -1.21
GTF3C1-211ENST00000569653 H0YGX0 51 aa7.5□□□□□ -1.21
GTF3C1-211ENST00000569653 LCE2DQ5TA82 110 aaPredicted RBP7.5□□□□□ -1.21
GTF3C1-211ENST00000569653 M0R143 59 aa7.49□□□□□ -1.21
GTF3C1-211ENST00000569653 MT1HP80294 61 aa7.48□□□□□ -1.21
GTF3C1-211ENST00000569653 OCIAD2Q56VL3 154 aa7.48□□□□□ -1.21
GTF3C1-211ENST00000569653 Q5XG85 94 aa7.48□□□□□ -1.21
GTF3C1-211ENST00000569653 Q6JHZ5 121 aa7.48□□□□□ -1.21
GTF3C1-211ENST00000569653 CLEC2BQ92478 149 aa7.47□□□□□ -1.21
GTF3C1-211ENST00000569653 IGLV8-61A0A075B6I0 122 aa7.46□□□□□ -1.22
GTF3C1-211ENST00000569653 PSMB2P49721 201 aa7.46□□□□□ -1.22
GTF3C1-211ENST00000569653 SNHG12Q9BXW3 62 aa7.46□□□□□ -1.22
GTF3C1-211ENST00000569653 A0A1B0GX51 115 aa7.45□□□□□ -1.22
GTF3C1-211ENST00000569653 C1orf195Q5TG92 126 aa7.45□□□□□ -1.22
GTF3C1-211ENST00000569653 FSIP2Q5CZC0 6907 aa7.44□□□□□ -1.22
GTF3C1-211ENST00000569653 TCL1BO95988 128 aa7.44□□□□□ -1.22
GTF3C1-211ENST00000569653 GHRHP01286 108 aa7.44□□□□□ -1.22
GTF3C1-211ENST00000569653 IGFL1Q6UW32 110 aa7.43□□□□□ -1.22
GTF3C1-211ENST00000569653 NAA38Q9BRA0 125 aaKnown RBP7.43□□□□□ -1.22
GTF3C1-211ENST00000569653 BATFQ16520 125 aa7.42□□□□□ -1.22
GTF3C1-211ENST00000569653 FLGP20930 4061 aaPredicted RBP7.42□□□□□ -1.22
GTF3C1-211ENST00000569653 COX6CP09669 75 aa7.4□□□□□ -1.22
GTF3C1-211ENST00000569653 TRBV7-7A0A0K0K1E9 115 aa7.39□□□□□ -1.23
GTF3C1-211ENST00000569653 H3BUT2 72 aa7.39□□□□□ -1.23
GTF3C1-211ENST00000569653 DNAL4O96015 105 aa7.39□□□□□ -1.23
GTF3C1-211ENST00000569653 LST1O00453 97 aa7.38□□□□□ -1.23
GTF3C1-211ENST00000569653 NDUFV3P56181 108 aaKnown RBP7.38□□□□□ -1.23
GTF3C1-211ENST00000569653 SCGB1C2P0DMR2 95 aa7.37□□□□□ -1.23
GTF3C1-211ENST00000569653 FABP2P12104 132 aa7.37□□□□□ -1.23
GTF3C1-211ENST00000569653 LORP23490 312 aaPredicted RBP7.37□□□□□ -1.23
GTF3C1-211ENST00000569653 H3BQ85 93 aa7.36□□□□□ -1.23
GTF3C1-211ENST00000569653 TAX1BP3O14907 124 aa7.36□□□□□ -1.23
GTF3C1-211ENST00000569653 RPL37P61927 97 aaKnown RBP7.36□□□□□ -1.23
GTF3C1-211ENST00000569653 CRCT1Q9UGL9 99 aa7.36□□□□□ -1.23
GTF3C1-211ENST00000569653 TRACP01848 142 aa7.35□□□□□ -1.23
GTF3C1-211ENST00000569653 ORMDL1Q9P0S3 153 aa7.35□□□□□ -1.23
GTF3C1-211ENST00000569653 H3BMG7 143 aa7.34□□□□□ -1.23
GTF3C1-211ENST00000569653 KRTAP10-6P60371 365 aaPredicted RBP7.34□□□□□ -1.23
GTF3C1-211ENST00000569653 Q6Q795 121 aa7.33□□□□□ -1.24
GTF3C1-211ENST00000569653 SS18L2Q9UHA2 77 aa7.33□□□□□ -1.24
GTF3C1-211ENST00000569653 C9orf118A6NHY6 69 aa7.32□□□□□ -1.24
GTF3C1-211ENST00000569653 TEN1Q86WV5 123 aa7.32□□□□□ -1.24
GTF3C1-211ENST00000569653 PCP4L1A6NKN8 68 aa7.31□□□□□ -1.24
GTF3C1-211ENST00000569653 TMEM256-PLSCR3K7ERE1 68 aa7.31□□□□□ -1.24
GTF3C1-211ENST00000569653 A0A1W2PPM0 123 aa7.29□□□□□ -1.24
GTF3C1-211ENST00000569653 ATXN8Q156A1 80 aa7.29□□□□□ -1.24
GTF3C1-211ENST00000569653 UBE2V1Q13404 147 aa7.27□□□□□ -1.25
GTF3C1-211ENST00000569653 A0A087WSZ3 146 aa7.26□□□□□ -1.25
GTF3C1-211ENST00000569653 A0A1B0GV72 72 aa7.26□□□□□ -1.25
GTF3C1-211ENST00000569653 BAALC-AS2P0C853 105 aa7.26□□□□□ -1.25
GTF3C1-211ENST00000569653 ANKRD29Q8N6D5 301 aa7.26□□□□□ -1.25
GTF3C1-211ENST00000569653 TRBV20-1A0A075B6N2 111 aa7.25□□□□□ -1.25
GTF3C1-211ENST00000569653 COL5A1-AS1Q5SY13 56 aa7.25□□□□□ -1.25
GTF3C1-211ENST00000569653 A0A1W2PNM2 257 aa7.24□□□□□ -1.25
GTF3C1-211ENST00000569653 LYRM7Q5U5X0 104 aa7.24□□□□□ -1.25
GTF3C1-211ENST00000569653 TRBV7-4A0A0J9YYF1 115 aa7.22□□□□□ -1.25
GTF3C1-211ENST00000569653 C9JAW5 83 aa7.22□□□□□ -1.25
GTF3C1-211ENST00000569653 OBSCN-AS1Q96MR7 158 aa7.21□□□□□ -1.26
GTF3C1-211ENST00000569653 CCKP06307 115 aa7.2□□□□□ -1.26
GTF3C1-211ENST00000569653 COX6B2Q6YFQ2 88 aa7.2□□□□□ -1.26
GTF3C1-211ENST00000569653 M0R2T5 61 aa7.19□□□□□ -1.26
GTF3C1-211ENST00000569653 MTURNQ8N3F0 131 aa7.19□□□□□ -1.26
GTF3C1-211ENST00000569653 RBM3P98179 157 aaKnown RBP7.18□□□□□ -1.26
GTF3C1-211ENST00000569653 Q75L30 129 aa7.18□□□□□ -1.26
GTF3C1-211ENST00000569653 Q96NJ1 140 aa7.18□□□□□ -1.26
GTF3C1-211ENST00000569653 DSCR8Q96T75 97 aa7.18□□□□□ -1.26
GTF3C1-211ENST00000569653 SPCS1Q9Y6A9 102 aa7.18□□□□□ -1.26
GTF3C1-211ENST00000569653 SIGMAR1Q99720 223 aa7.17□□□□□ -1.26
GTF3C1-211ENST00000569653 SMCPP49901 116 aaPredicted RBP7.15□□□□□ -1.26
GTF3C1-211ENST00000569653 VPS25Q9BRG1 176 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms