RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 SSBP3-AS1Q7Z2R9 100 aa5.35□□□□□ -1.55
CAPN3-219ENST00000569136 Q9BRP9 147 aa5.35□□□□□ -1.55
CAPN3-219ENST00000569136 A4D1N5 150 aa5.34□□□□□ -1.55
CAPN3-219ENST00000569136 A6NDN8 102 aa5.34□□□□□ -1.55
CAPN3-219ENST00000569136 ERC2-IT1O76042 136 aa5.34□□□□□ -1.55
CAPN3-219ENST00000569136 SLC25A34Q6PIV7 304 aa5.34□□□□□ -1.55
CAPN3-219ENST00000569136 COX7BP24311 80 aa5.33□□□□□ -1.56
CAPN3-219ENST00000569136 PRR4Q16378 134 aa5.33□□□□□ -1.56
CAPN3-219ENST00000569136 LRP2P98164 4655 aa5.32□□□□□ -1.56
CAPN3-219ENST00000569136 K7ERU9 68 aa5.32□□□□□ -1.56
CAPN3-219ENST00000569136 SPINK1P00995 79 aa5.32□□□□□ -1.56
CAPN3-219ENST00000569136 COX8AP10176 69 aa5.32□□□□□ -1.56
CAPN3-219ENST00000569136 ELOF1P60002 83 aaKnown RBP5.32□□□□□ -1.56
CAPN3-219ENST00000569136 VAMP3Q15836 100 aa5.32□□□□□ -1.56
CAPN3-219ENST00000569136 BATFQ16520 125 aa5.32□□□□□ -1.56
CAPN3-219ENST00000569136 C6orf99Q4VX62 202 aa5.32□□□□□ -1.56
CAPN3-219ENST00000569136 SPATA45Q537H7 98 aa5.32□□□□□ -1.56
CAPN3-219ENST00000569136 C3orf22Q8N5N4 141 aa5.32□□□□□ -1.56
CAPN3-219ENST00000569136 A0A1B0GWB2 263 aa5.31□□□□□ -1.56
CAPN3-219ENST00000569136 SPRR1BP22528 89 aa5.3□□□□□ -1.56
CAPN3-219ENST00000569136 Q8NBF4 154 aa5.3□□□□□ -1.56
CAPN3-219ENST00000569136 HIST1H4GQ99525 98 aa5.3□□□□□ -1.56
CAPN3-219ENST00000569136 NHP2Q9NX24 153 aaKnown RBP5.3□□□□□ -1.56
CAPN3-219ENST00000569136 TAL2Q16559 108 aa5.29□□□□□ -1.56
CAPN3-219ENST00000569136 VPS25Q9BRG1 176 aa5.29□□□□□ -1.56
CAPN3-219ENST00000569136 LAMTOR3Q9UHA4 124 aa5.29□□□□□ -1.56
CAPN3-219ENST00000569136 IGLV9-49A0A0B4J1Y8 123 aa5.28□□□□□ -1.56
CAPN3-219ENST00000569136 TEX49A0A1B0GTD5 131 aa5.28□□□□□ -1.56
CAPN3-219ENST00000569136 SLC25A20O43772 301 aa5.28□□□□□ -1.56
CAPN3-219ENST00000569136 OCIAD2Q56VL3 154 aa5.28□□□□□ -1.56
CAPN3-219ENST00000569136 ST20-AS1Q8NBB2 130 aa5.28□□□□□ -1.56
CAPN3-219ENST00000569136 SMIM11BQ8TCY0 68 aa5.28□□□□□ -1.56
CAPN3-219ENST00000569136 HIGD1BQ9P298 99 aa5.28□□□□□ -1.56
CAPN3-219ENST00000569136 UBR4Q5T4S7 5183 aa5.27□□□□□ -1.57
CAPN3-219ENST00000569136 RPS29P62273 56 aaKnown RBP5.27□□□□□ -1.57
CAPN3-219ENST00000569136 MOBPQ13875 183 aa5.27□□□□□ -1.57
CAPN3-219ENST00000569136 IGLV7-46A0A075B6I9 117 aa5.26□□□□□ -1.57
CAPN3-219ENST00000569136 SCGB1A1P11684 91 aa5.26□□□□□ -1.57
CAPN3-219ENST00000569136 FP248Q71RG6 208 aaPredicted RBP5.26□□□□□ -1.57
CAPN3-219ENST00000569136 SNCGO76070 127 aa5.25□□□□□ -1.57
CAPN3-219ENST00000569136 C9orf153Q5TBE3 101 aa5.25□□□□□ -1.57
CAPN3-219ENST00000569136 DEFB105AQ8NG35 78 aa5.25□□□□□ -1.57
CAPN3-219ENST00000569136 BVES-AS1Q5T3Y7 98 aa5.24□□□□□ -1.57
CAPN3-219ENST00000569136 LINC00575Q6W349 94 aa5.24□□□□□ -1.57
CAPN3-219ENST00000569136 GTF2H5Q6ZYL4 71 aa5.24□□□□□ -1.57
CAPN3-219ENST00000569136 IGLV5-48A0A075B6I7 105 aa5.23□□□□□ -1.57
CAPN3-219ENST00000569136 hADV29S1A0JD25 119 aa5.23□□□□□ -1.57
CAPN3-219ENST00000569136 RAB37Q96AX2 223 aa5.23□□□□□ -1.57
CAPN3-219ENST00000569136 TAX1BP3O14907 124 aa5.22□□□□□ -1.57
CAPN3-219ENST00000569136 CFC1BP0CG36 223 aa5.22□□□□□ -1.57
CAPN3-219ENST00000569136 CFC1P0CG37 223 aa5.22□□□□□ -1.57
CAPN3-219ENST00000569136 CD164Q04900 197 aa5.22□□□□□ -1.57
CAPN3-219ENST00000569136 RETNLBQ9BQ08 111 aa5.22□□□□□ -1.57
CAPN3-219ENST00000569136 A0A0B4J2C4 111 aa5.21□□□□□ -1.58
CAPN3-219ENST00000569136 H0YGX0 51 aa5.21□□□□□ -1.58
CAPN3-219ENST00000569136 TPRXLQ17RH7 258 aa5.21□□□□□ -1.58
CAPN3-219ENST00000569136 LINC01547P58512 204 aaPredicted RBP5.2□□□□□ -1.58
CAPN3-219ENST00000569136 Q1RN00 199 aa5.2□□□□□ -1.58
CAPN3-219ENST00000569136 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.2□□□□□ -1.58
CAPN3-219ENST00000569136 SMIM29Q86T20 159 aa5.2□□□□□ -1.58
CAPN3-219ENST00000569136 CEND1Q8N111 149 aa5.2□□□□□ -1.58
CAPN3-219ENST00000569136 Q8N377 158 aa5.2□□□□□ -1.58
CAPN3-219ENST00000569136 C2orf91Q6ZV80 131 aa5.19□□□□□ -1.58
CAPN3-219ENST00000569136 PPDPFLQ8WWR9 84 aa5.19□□□□□ -1.58
CAPN3-219ENST00000569136 LIMD2Q9BT23 127 aa5.19□□□□□ -1.58
CAPN3-219ENST00000569136 A0A1B0GV72 72 aa5.18□□□□□ -1.58
CAPN3-219ENST00000569136 F8WEM9 126 aa5.18□□□□□ -1.58
CAPN3-219ENST00000569136 H7C2G1 150 aa5.18□□□□□ -1.58
CAPN3-219ENST00000569136 MTURNQ8N3F0 131 aa5.18□□□□□ -1.58
CAPN3-219ENST00000569136 PRO1854Q9UHT4 67 aa5.18□□□□□ -1.58
CAPN3-219ENST00000569136 J3QR89 54 aa5.17□□□□□ -1.58
CAPN3-219ENST00000569136 K7EP34 96 aa5.17□□□□□ -1.58
CAPN3-219ENST00000569136 HSD52Q0P140 79 aa5.17□□□□□ -1.58
CAPN3-219ENST00000569136 Q5XG85 94 aa5.17□□□□□ -1.58
CAPN3-219ENST00000569136 Q6JHZ5 121 aa5.17□□□□□ -1.58
CAPN3-219ENST00000569136 Q6ZQY7 126 aa5.17□□□□□ -1.58
CAPN3-219ENST00000569136 LPAP08519 4548 aa5.17□□□□□ -1.58
CAPN3-219ENST00000569136 Q75L30 129 aa5.16□□□□□ -1.58
CAPN3-219ENST00000569136 A0A1B0GX51 115 aa5.15□□□□□ -1.59
CAPN3-219ENST00000569136 HRCT1Q6UXD1 115 aa5.15□□□□□ -1.59
CAPN3-219ENST00000569136 IGLV8-61A0A075B6I0 122 aa5.14□□□□□ -1.59
CAPN3-219ENST00000569136 TCL1BO95988 128 aa5.14□□□□□ -1.59
CAPN3-219ENST00000569136 KRTAP13-3Q3SY46 172 aa5.14□□□□□ -1.59
CAPN3-219ENST00000569136 SIGMAR1Q99720 223 aa5.14□□□□□ -1.59
CAPN3-219ENST00000569136 RNF213Q63HN8 5207 aa5.13□□□□□ -1.59
CAPN3-219ENST00000569136 H3BQ85 93 aa5.13□□□□□ -1.59
CAPN3-219ENST00000569136 COX6CP09669 75 aa5.13□□□□□ -1.59
CAPN3-219ENST00000569136 FXYD2P54710 66 aa5.13□□□□□ -1.59
CAPN3-219ENST00000569136 FABP2P12104 132 aa5.12□□□□□ -1.59
CAPN3-219ENST00000569136 A0A1W2PPM0 123 aa5.11□□□□□ -1.59
CAPN3-219ENST00000569136 A0A0U1RQV1 116 aa5.1□□□□□ -1.59
CAPN3-219ENST00000569136 F8W1H4 67 aa5.1□□□□□ -1.59
CAPN3-219ENST00000569136 PSMB2P49721 201 aa5.1□□□□□ -1.59
CAPN3-219ENST00000569136 CLEC2BQ92478 149 aa5.1□□□□□ -1.59
CAPN3-219ENST00000569136 SPCS1Q9Y6A9 102 aa5.1□□□□□ -1.59
CAPN3-219ENST00000569136 H3BUT2 72 aa5.09□□□□□ -1.59
CAPN3-219ENST00000569136 KRTAP2-2Q9BYT5 123 aa5.09□□□□□ -1.59
CAPN3-219ENST00000569136 MT3P25713 68 aa5.08□□□□□ -1.6
CAPN3-219ENST00000569136 NDUFV3P56181 108 aaKnown RBP5.08□□□□□ -1.6
CAPN3-219ENST00000569136 ASB16-AS1Q495Z4 193 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms