RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 UBE2AP49459 152 aa11.25□□□□□ -0.61
SMPD3-211ENST00000568373 NREPQ16612 68 aa11.25□□□□□ -0.61
SMPD3-211ENST00000568373 BCE1O60756 84 aa11.24□□□□□ -0.61
SMPD3-211ENST00000568373 SCXQ7RTU7 201 aa11.24□□□□□ -0.61
SMPD3-211ENST00000568373 LINC00476Q8WZB0 136 aa11.24□□□□□ -0.61
SMPD3-211ENST00000568373 UQCRQO14949 82 aa11.23□□□□□ -0.61
SMPD3-211ENST00000568373 SPRR4Q96PI1 79 aa11.23□□□□□ -0.61
SMPD3-211ENST00000568373 COX7CP15954 63 aa11.22□□□□□ -0.61
SMPD3-211ENST00000568373 SRRM2Q9UQ35 2752 aaKnown RBP11.22□□□□□ -0.61
SMPD3-211ENST00000568373 IGLV8-61A0A075B6I0 122 aa11.21□□□□□ -0.62
SMPD3-211ENST00000568373 KRTAP13-1Q8IUC0 172 aa11.21□□□□□ -0.62
SMPD3-211ENST00000568373 SPRR1BP22528 89 aa11.2□□□□□ -0.62
SMPD3-211ENST00000568373 IGLV5-52A0A0A0MRZ9 124 aa11.2□□□□□ -0.62
SMPD3-211ENST00000568373 SERP2Q8N6R1 65 aa11.19□□□□□ -0.62
SMPD3-211ENST00000568373 IGFL1Q6UW32 110 aa11.18□□□□□ -0.62
SMPD3-211ENST00000568373 CRYGAP11844 174 aa11.18□□□□□ -0.62
SMPD3-211ENST00000568373 BPY2O14599 106 aa11.17□□□□□ -0.62
SMPD3-211ENST00000568373 ALMS1Q8TCU4 4167 aa11.17□□□□□ -0.62
SMPD3-211ENST00000568373 PLAC8Q9NZF1 115 aa11.16□□□□□ -0.62
SMPD3-211ENST00000568373 HYDINQ4G0P3 5121 aa11.16□□□□□ -0.62
SMPD3-211ENST00000568373 C9orf153Q5TBE3 101 aa11.15□□□□□ -0.62
SMPD3-211ENST00000568373 A0A0G2JQZ4 141 aa11.15□□□□□ -0.63
SMPD3-211ENST00000568373 DNAH8Q96JB1 4490 aa11.14□□□□□ -0.63
SMPD3-211ENST00000568373 Q8N9L7 120 aa11.13□□□□□ -0.63
SMPD3-211ENST00000568373 IGKV4-1P06312 121 aa11.12□□□□□ -0.63
SMPD3-211ENST00000568373 FRAS1Q86XX4 4008 aa11.12□□□□□ -0.63
SMPD3-211ENST00000568373 PSORS1C2Q9UIG4 136 aa11.1□□□□□ -0.63
SMPD3-211ENST00000568373 DNAH11Q96DT5 4516 aa11.08□□□□□ -0.64
SMPD3-211ENST00000568373 KMT2CQ8NEZ4 4911 aaKnown RBP11.07□□□□□ -0.64
SMPD3-211ENST00000568373 SACSQ9NZJ4 4579 aa11.07□□□□□ -0.64
SMPD3-211ENST00000568373 DNAH5Q8TE73 4624 aa11.06□□□□□ -0.64
SMPD3-211ENST00000568373 TRAV7A0A075B6U4 112 aa11.05□□□□□ -0.64
SMPD3-211ENST00000568373 A0A087WSZ3 146 aa11.05□□□□□ -0.64
SMPD3-211ENST00000568373 KRTAP10-2P60368 255 aa11.04□□□□□ -0.64
SMPD3-211ENST00000568373 DSCR10P59022 87 aa11.02□□□□□ -0.64
SMPD3-211ENST00000568373 LINC00483Q53H64 154 aa11.02□□□□□ -0.64
SMPD3-211ENST00000568373 ZNF706Q9Y5V0 76 aaPredicted RBP11.02□□□□□ -0.65
SMPD3-211ENST00000568373 J3KT08 172 aa11.01□□□□□ -0.65
SMPD3-211ENST00000568373 ZNF861PO60384 105 aa11.01□□□□□ -0.65
SMPD3-211ENST00000568373 FAT2Q9NYQ8 4349 aa11.01□□□□□ -0.65
SMPD3-211ENST00000568373 CYSTM1Q9H1C7 97 aa11□□□□□ -0.65
SMPD3-211ENST00000568373 RPS28P62857 69 aaKnown RBP10.97□□□□□ -0.65
SMPD3-211ENST00000568373 PKD1P98161 4303 aa10.97□□□□□ -0.65
SMPD3-211ENST00000568373 K7EQZ3 153 aa10.97□□□□□ -0.65
SMPD3-211ENST00000568373 FAM30AQ9NZY2 134 aa10.97□□□□□ -0.65
SMPD3-211ENST00000568373 IGLV9-49A0A0B4J1Y8 123 aa10.96□□□□□ -0.65
SMPD3-211ENST00000568373 C20orf197Q8N268 126 aa10.95□□□□□ -0.66
SMPD3-211ENST00000568373 CIRBP-AS1Q8TBR5 109 aa10.95□□□□□ -0.66
SMPD3-211ENST00000568373 DEFB116Q30KQ4 102 aa10.94□□□□□ -0.66
SMPD3-211ENST00000568373 IGLV7-43P04211 117 aa10.94□□□□□ -0.66
SMPD3-211ENST00000568373 RPL37AP61513 92 aaKnown RBP10.93□□□□□ -0.66
SMPD3-211ENST00000568373 TMEM258P61165 79 aa10.93□□□□□ -0.66
SMPD3-211ENST00000568373 Q6ZSA8 131 aa10.91□□□□□ -0.66
SMPD3-211ENST00000568373 OCR1Q9BZK8 76 aa10.91□□□□□ -0.66
SMPD3-211ENST00000568373 RYR2Q92736 4967 aa10.91□□□□□ -0.66
SMPD3-211ENST00000568373 KRTAP10-1P60331 282 aa10.89□□□□□ -0.67
SMPD3-211ENST00000568373 LINC00472Q9H8W2 130 aa10.89□□□□□ -0.67
SMPD3-211ENST00000568373 ANAPC11Q9NYG5 84 aa10.89□□□□□ -0.67
SMPD3-211ENST00000568373 LCE6AA0A183 80 aa10.88□□□□□ -0.67
SMPD3-211ENST00000568373 MOBPQ13875 183 aa10.88□□□□□ -0.67
SMPD3-211ENST00000568373 RYR3Q15413 4870 aa10.87□□□□□ -0.67
SMPD3-211ENST00000568373 KLKP1Q107X0 134 aa10.87□□□□□ -0.67
SMPD3-211ENST00000568373 HCG22E2RYF7 251 aa10.86□□□□□ -0.67
SMPD3-211ENST00000568373 C5orf47Q569G3 176 aa10.86□□□□□ -0.67
SMPD3-211ENST00000568373 SNURFQ9Y675 71 aa10.83□□□□□ -0.68
SMPD3-211ENST00000568373 LRP1BQ9NZR2 4599 aa10.83□□□□□ -0.68
SMPD3-211ENST00000568373 A8MWP4 228 aa10.82□□□□□ -0.68
SMPD3-211ENST00000568373 HRCT1Q6UXD1 115 aa10.81□□□□□ -0.68
SMPD3-211ENST00000568373 PRR15Q8IV56 129 aa10.81□□□□□ -0.68
SMPD3-211ENST00000568373 TMEM254Q8TBM7 123 aa10.81□□□□□ -0.68
SMPD3-211ENST00000568373 H7BZZ5 65 aa10.79□□□□□ -0.68
SMPD3-211ENST00000568373 Q96NJ1 140 aa10.78□□□□□ -0.68
SMPD3-211ENST00000568373 WFDC13Q8IUB5 93 aa10.77□□□□□ -0.69
SMPD3-211ENST00000568373 KRTAP29-1A8MX34 341 aaPredicted RBP10.75□□□□□ -0.69
SMPD3-211ENST00000568373 PKHD1P08F94 4074 aa10.74□□□□□ -0.69
SMPD3-211ENST00000568373 A0A0U1RQV1 116 aa10.74□□□□□ -0.69
SMPD3-211ENST00000568373 NDUFC1O43677 76 aa10.74□□□□□ -0.69
SMPD3-211ENST00000568373 NDUFB1O75438 58 aa10.72□□□□□ -0.69
SMPD3-211ENST00000568373 OXTP01178 125 aa10.72□□□□□ -0.69
SMPD3-211ENST00000568373 CASC2Q6XLA1 102 aa10.72□□□□□ -0.69
SMPD3-211ENST00000568373 VPS13BQ7Z7G8 4022 aa10.71□□□□□ -0.69
SMPD3-211ENST00000568373 SSBP3-AS1Q7Z2R9 100 aa10.7□□□□□ -0.7
SMPD3-211ENST00000568373 FAM236DA0A1B0GTK5 79 aa10.69□□□□□ -0.7
SMPD3-211ENST00000568373 FAM236CP0DP71 79 aa10.69□□□□□ -0.7
SMPD3-211ENST00000568373 LINC00336Q6ZUF6 198 aa10.69□□□□□ -0.7
SMPD3-211ENST00000568373 CD164Q04900 197 aa10.68□□□□□ -0.7
SMPD3-211ENST00000568373 MMP24-AS1A0A0U1RRL7 71 aa10.67□□□□□ -0.7
SMPD3-211ENST00000568373 Q5XG85 94 aa10.65□□□□□ -0.7
SMPD3-211ENST00000568373 A0A087X002 238 aa10.65□□□□□ -0.7
SMPD3-211ENST00000568373 FAM229BQ4G0N7 80 aa10.64□□□□□ -0.71
SMPD3-211ENST00000568373 A0A1B0GVX0 72 aa10.62□□□□□ -0.71
SMPD3-211ENST00000568373 hDV103S1A0JD37 113 aa10.62□□□□□ -0.71
SMPD3-211ENST00000568373 CDK2AP2O75956 126 aa10.62□□□□□ -0.71
SMPD3-211ENST00000568373 KRTAP13-2Q52LG2 175 aa10.62□□□□□ -0.71
SMPD3-211ENST00000568373 ZCCHC13Q8WW36 166 aaKnown RBP10.61□□□□□ -0.71
SMPD3-211ENST00000568373 KRTAP1-4P0C5Y4 121 aa10.6□□□□□ -0.71
SMPD3-211ENST00000568373 C4orf26Q17RF5 130 aa10.6□□□□□ -0.71
SMPD3-211ENST00000568373 ASB16-AS1Q495Z4 193 aa10.6□□□□□ -0.71
SMPD3-211ENST00000568373 C8orf17Q9NRJ1 99 aa10.6□□□□□ -0.71
SMPD3-211ENST00000568373 DYNC1H1Q14204 4646 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms