RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 VWFP04275 2813 aa7.04□□□□□ -1.28
PALB2-206ENST00000568219 COA5Q86WW8 74 aa7.04□□□□□ -1.28
PALB2-206ENST00000568219 LINC01556Q5JQF7 62 aa7.03□□□□□ -1.28
PALB2-206ENST00000568219 RETNLBQ9BQ08 111 aa7.02□□□□□ -1.29
PALB2-206ENST00000568219 CHTF8P0CG12 524 aa7.01□□□□□ -1.29
PALB2-206ENST00000568219 CD164Q04900 197 aa7.01□□□□□ -1.29
PALB2-206ENST00000568219 A0A1B0GW54 56 aa7.01□□□□□ -1.29
PALB2-206ENST00000568219 J3QKU1 62 aa7.01□□□□□ -1.29
PALB2-206ENST00000568219 PHF5AQ7RTV0 110 aaKnown RBP7□□□□□ -1.29
PALB2-206ENST00000568219 KRTAP1-3Q8IUG1 177 aa6.98□□□□□ -1.29
PALB2-206ENST00000568219 Q5VV11 94 aa6.97□□□□□ -1.29
PALB2-206ENST00000568219 KTN1-AS1Q86SY8 53 aa6.97□□□□□ -1.29
PALB2-206ENST00000568219 PKD1L1Q8TDX9 2849 aa6.96□□□□□ -1.29
PALB2-206ENST00000568219 C16orf90A8MZG2 172 aa6.96□□□□□ -1.29
PALB2-206ENST00000568219 Q8N9P0 234 aaPredicted RBP6.96□□□□□ -1.29
PALB2-206ENST00000568219 LINC00588Q9Y4M8 146 aa6.95□□□□□ -1.3
PALB2-206ENST00000568219 LOC101927531A0A1B0GV80 90 aa6.95□□□□□ -1.3
PALB2-206ENST00000568219 RBM12B-AS1Q9P1G2 102 aa6.95□□□□□ -1.3
PALB2-206ENST00000568219 SPRR4Q96PI1 79 aa6.95□□□□□ -1.3
PALB2-206ENST00000568219 A8MWP4 228 aa6.94□□□□□ -1.3
PALB2-206ENST00000568219 ATP11AUNQ6ZP68 121 aa6.94□□□□□ -1.3
PALB2-206ENST00000568219 CYP4F30PQ9H0H9 118 aa6.94□□□□□ -1.3
PALB2-206ENST00000568219 TENM1Q9UKZ4 2725 aa6.92□□□□□ -1.3
PALB2-206ENST00000568219 H3BPC8 53 aa6.91□□□□□ -1.3
PALB2-206ENST00000568219 STAB2Q8WWQ8 2551 aa6.9□□□□□ -1.3
PALB2-206ENST00000568219 PRR26Q8N8Z3 221 aa6.9□□□□□ -1.3
PALB2-206ENST00000568219 IGLV8-61A0A075B6I0 122 aa6.9□□□□□ -1.31
PALB2-206ENST00000568219 H3BNG1 76 aa6.9□□□□□ -1.31
PALB2-206ENST00000568219 KRTAP1-1Q07627 177 aa6.89□□□□□ -1.31
PALB2-206ENST00000568219 DNAH10OSP0CZ25 163 aa6.89□□□□□ -1.31
PALB2-206ENST00000568219 CIRBP-AS1Q8TBR5 109 aa6.89□□□□□ -1.31
PALB2-206ENST00000568219 FBN1P35555 2871 aaKnown RBP6.88□□□□□ -1.31
PALB2-206ENST00000568219 SPINK1P00995 79 aa6.88□□□□□ -1.31
PALB2-206ENST00000568219 ZCCHC13Q8WW36 166 aaKnown RBP6.88□□□□□ -1.31
PALB2-206ENST00000568219 TENM3Q9P273 2699 aa6.88□□□□□ -1.31
PALB2-206ENST00000568219 MOBPQ13875 183 aa6.87□□□□□ -1.31
PALB2-206ENST00000568219 KRTAP26-1Q6PEX3 210 aa6.87□□□□□ -1.31
PALB2-206ENST00000568219 ANAPC11Q9NYG5 84 aa6.87□□□□□ -1.31
PALB2-206ENST00000568219 CNBPP62633 177 aaKnown RBP6.87□□□□□ -1.31
PALB2-206ENST00000568219 C14orf177Q52M58 125 aa6.86□□□□□ -1.31
PALB2-206ENST00000568219 SPANXA2-OT1Q8N9U9 137 aa6.86□□□□□ -1.31
PALB2-206ENST00000568219 KRTAP10-11P60412 298 aa6.85□□□□□ -1.31
PALB2-206ENST00000568219 TNP2Q05952 138 aa6.85□□□□□ -1.31
PALB2-206ENST00000568219 LCA10Q71F78 164 aa6.85□□□□□ -1.31
PALB2-206ENST00000568219 PRAC1Q96KF2 57 aa6.85□□□□□ -1.31
PALB2-206ENST00000568219 C7orf65Q6ZTY9 151 aa6.85□□□□□ -1.31
PALB2-206ENST00000568219 TP53AIP1Q9HCN2 124 aa6.85□□□□□ -1.31
PALB2-206ENST00000568219 TLX1NBP0CAT3 122 aa6.84□□□□□ -1.31
PALB2-206ENST00000568219 CDC42SE1Q9NRR8 79 aa6.84□□□□□ -1.31
PALB2-206ENST00000568219 A0A1B0GU69 56 aa6.84□□□□□ -1.31
PALB2-206ENST00000568219 SPINK7P58062 85 aa6.83□□□□□ -1.32
PALB2-206ENST00000568219 SPRR1AP35321 89 aa6.83□□□□□ -1.32
PALB2-206ENST00000568219 SRRM2Q9UQ35 2752 aaKnown RBP6.82□□□□□ -1.32
PALB2-206ENST00000568219 PLA2G2DQ9UNK4 145 aa6.82□□□□□ -1.32
PALB2-206ENST00000568219 C8orf17Q9NRJ1 99 aa6.82□□□□□ -1.32
PALB2-206ENST00000568219 Q75L30 129 aa6.8□□□□□ -1.32
PALB2-206ENST00000568219 IGLV7-46A0A075B6I9 117 aa6.8□□□□□ -1.32
PALB2-206ENST00000568219 KRTAP4-16G5E9R7 235 aaPredicted RBP6.8□□□□□ -1.32
PALB2-206ENST00000568219 IGKV2D-30A0A075B6S6 120 aa6.79□□□□□ -1.32
PALB2-206ENST00000568219 IGKV2-30P06310 120 aa6.79□□□□□ -1.32
PALB2-206ENST00000568219 ACYP2P14621 99 aa6.79□□□□□ -1.32
PALB2-206ENST00000568219 MDFIQ99750 246 aa6.79□□□□□ -1.32
PALB2-206ENST00000568219 MRPL34Q9BQ48 92 aaKnown RBP6.79□□□□□ -1.32
PALB2-206ENST00000568219 DMBT1Q9UGM3 2413 aaPredicted RBP6.79□□□□□ -1.32
PALB2-206ENST00000568219 KMT2BQ9UMN6 2715 aaPredicted RBP6.78□□□□□ -1.32
PALB2-206ENST00000568219 IGLV5-37A0A075B6J1 123 aa6.77□□□□□ -1.33
PALB2-206ENST00000568219 LCE6AA0A183 80 aa6.77□□□□□ -1.33
PALB2-206ENST00000568219 MMP24-AS1A0A0U1RRL7 71 aa6.76□□□□□ -1.33
PALB2-206ENST00000568219 AKAP9Q99996 3911 aa6.76□□□□□ -1.33
PALB2-206ENST00000568219 KRTAP7-1Q8IUC3 87 aa6.76□□□□□ -1.33
PALB2-206ENST00000568219 LINC00472Q9H8W2 130 aa6.75□□□□□ -1.33
PALB2-206ENST00000568219 NBPF19A0A087WUL8 3843 aa6.75□□□□□ -1.33
PALB2-206ENST00000568219 C8orf87E5RJ46 101 aa6.75□□□□□ -1.33
PALB2-206ENST00000568219 HRES1P13985 223 aa6.75□□□□□ -1.33
PALB2-206ENST00000568219 KRTAP29-1A8MX34 341 aaPredicted RBP6.75□□□□□ -1.33
PALB2-206ENST00000568219 ZNF706Q9Y5V0 76 aaPredicted RBP6.75□□□□□ -1.33
PALB2-206ENST00000568219 A0A1B0GVX0 72 aa6.74□□□□□ -1.33
PALB2-206ENST00000568219 K7EIL1 84 aa6.74□□□□□ -1.33
PALB2-206ENST00000568219 TENM4Q6N022 2769 aa6.73□□□□□ -1.33
PALB2-206ENST00000568219 FLG2Q5D862 2391 aaPredicted RBP6.73□□□□□ -1.33
PALB2-206ENST00000568219 LINC00313P59037 77 aa6.72□□□□□ -1.33
PALB2-206ENST00000568219 LINC01558Q9Y6Z2 57 aa6.72□□□□□ -1.33
PALB2-206ENST00000568219 TENM2Q9NT68 2774 aa6.71□□□□□ -1.34
PALB2-206ENST00000568219 C9orf163Q8N9P6 203 aa6.71□□□□□ -1.34
PALB2-206ENST00000568219 OTOGQ6ZRI0 2925 aa6.7□□□□□ -1.34
PALB2-206ENST00000568219 C4orf48Q5BLP8 95 aa6.69□□□□□ -1.34
PALB2-206ENST00000568219 MIR22HGQ0VDD5 57 aa6.68□□□□□ -1.34
PALB2-206ENST00000568219 KRTAP11-1Q8IUC1 163 aa6.68□□□□□ -1.34
PALB2-206ENST00000568219 KRTAP24-1Q3LI83 254 aa6.67□□□□□ -1.34
PALB2-206ENST00000568219 ADM2Q7Z4H4 148 aa6.67□□□□□ -1.34
PALB2-206ENST00000568219 UQCR11O14957 56 aa6.67□□□□□ -1.34
PALB2-206ENST00000568219 A6NN06 94 aa6.66□□□□□ -1.34
PALB2-206ENST00000568219 RTL8CO15255 209 aa6.66□□□□□ -1.34
PALB2-206ENST00000568219 KRTAP1-5Q9BYS1 174 aa6.66□□□□□ -1.34
PALB2-206ENST00000568219 TRRAPQ9Y4A5 3859 aa6.65□□□□□ -1.34
PALB2-206ENST00000568219 A0A087X002 238 aa6.65□□□□□ -1.35
PALB2-206ENST00000568219 NOTCH2NLQ7Z3S9 236 aa6.65□□□□□ -1.35
PALB2-206ENST00000568219 SPACA4Q8TDM5 124 aa6.65□□□□□ -1.35
PALB2-206ENST00000568219 COL7A1Q02388 2944 aa6.62□□□□□ -1.35
PALB2-206ENST00000568219 H3BS24 57 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms