RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-238	ENST00000568169	PCP2	Q8IVA1	136 aa		5.82	□□□□□ -1.48
TCF4-238	ENST00000568169	OBSCN-AS1	Q96MR7	158 aa		5.82	□□□□□ -1.48
TCF4-238	ENST00000568169	C20orf202	A1L168	122 aa		5.81	□□□□□ -1.48
TCF4-238	ENST00000568169	ZNF815P	A8K554	130 aa		5.81	□□□□□ -1.48
TCF4-238	ENST00000568169	USH2A	O75445	5202 aa		5.8	□□□□□ -1.48
TCF4-238	ENST00000568169		A4D1N5	150 aa		5.8	□□□□□ -1.48
TCF4-238	ENST00000568169	TRBV7-7	A0A0K0K1E9	115 aa		5.79	□□□□□ -1.48
TCF4-238	ENST00000568169	MT2A	P02795	61 aa		5.79	□□□□□ -1.48
TCF4-238	ENST00000568169	TTTY13	Q9BZ97	58 aa		5.79	□□□□□ -1.48
TCF4-238	ENST00000568169	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	5.79	□□□□□ -1.48
TCF4-238	ENST00000568169	SYS1-DBNDD2	H3BUS1	97 aa		5.78	□□□□□ -1.48
TCF4-238	ENST00000568169	NHP2	Q9NX24	153 aa	Known RBP	5.78	□□□□□ -1.48
TCF4-238	ENST00000568169		A6NDN8	102 aa		5.77	□□□□□ -1.49
TCF4-238	ENST00000568169	C9orf118	A6NHY6	69 aa		5.77	□□□□□ -1.49
TCF4-238	ENST00000568169		F8WEM9	126 aa		5.77	□□□□□ -1.49
TCF4-238	ENST00000568169	LINC01545	Q5VT33	79 aa		5.76	□□□□□ -1.49
TCF4-238	ENST00000568169		Q6JHZ5	121 aa		5.76	□□□□□ -1.49
TCF4-238	ENST00000568169	IGFL1	Q6UW32	110 aa		5.75	□□□□□ -1.49
TCF4-238	ENST00000568169	CLEC2B	Q92478	149 aa		5.75	□□□□□ -1.49
TCF4-238	ENST00000568169		Q96NJ1	140 aa		5.75	□□□□□ -1.49
TCF4-238	ENST00000568169	TRBV20-1	A0A075B6N2	111 aa		5.74	□□□□□ -1.49
TCF4-238	ENST00000568169	MT1F	P04733	61 aa		5.74	□□□□□ -1.49
TCF4-238	ENST00000568169	IFITM1	P13164	125 aa		5.74	□□□□□ -1.49
TCF4-238	ENST00000568169	SMIM11B	Q8TCY0	68 aa		5.74	□□□□□ -1.49
TCF4-238	ENST00000568169	COPS9	Q8WXC6	57 aa		5.74	□□□□□ -1.49
TCF4-238	ENST00000568169	C20orf166-AS1	Q96NR2	134 aa		5.74	□□□□□ -1.49
TCF4-238	ENST00000568169		A8MUU9	505 aa		5.73	□□□□□ -1.49
TCF4-238	ENST00000568169	OCIAD2	Q56VL3	154 aa		5.72	□□□□□ -1.49
TCF4-238	ENST00000568169	PET117	Q6UWS5	81 aa		5.72	□□□□□ -1.49
TCF4-238	ENST00000568169	SCGB1D4	Q6XE38	83 aa		5.72	□□□□□ -1.49
TCF4-238	ENST00000568169	TRAV13-2	A0A0B4J235	113 aa		5.71	□□□□□ -1.5
TCF4-238	ENST00000568169	LINC00575	Q6W349	94 aa		5.71	□□□□□ -1.5
TCF4-238	ENST00000568169		Q6ZVH6	145 aa		5.71	□□□□□ -1.5
TCF4-238	ENST00000568169	MUSTN1	Q8IVN3	82 aa		5.71	□□□□□ -1.5
TCF4-238	ENST00000568169	LST1	O00453	97 aa		5.7	□□□□□ -1.5
TCF4-238	ENST00000568169		Q6ZQY7	126 aa		5.7	□□□□□ -1.5
TCF4-238	ENST00000568169	KRTAP10-10	P60014	251 aa		5.69	□□□□□ -1.5
TCF4-238	ENST00000568169	SLC7A5P1	Q8MH63	180 aa		5.69	□□□□□ -1.5
TCF4-238	ENST00000568169	COLCA2	A8K830	154 aa		5.68	□□□□□ -1.5
TCF4-238	ENST00000568169	VAMP3	Q15836	100 aa		5.68	□□□□□ -1.5
TCF4-238	ENST00000568169	hADV29S1	A0JD25	119 aa		5.67	□□□□□ -1.5
TCF4-238	ENST00000568169	KRTAP3-1	Q9BYR8	98 aa		5.67	□□□□□ -1.5
TCF4-238	ENST00000568169	C3orf79	P0CE67	100 aa		5.66	□□□□□ -1.5
TCF4-238	ENST00000568169	MACF1	Q9UPN3	7388 aa	Known RBP	5.66	□□□□□ -1.5
TCF4-238	ENST00000568169	FAM236D	A0A1B0GTK5	79 aa		5.65	□□□□□ -1.5
TCF4-238	ENST00000568169	KRTAP16-1	A8MUX0	517 aa		5.65	□□□□□ -1.5
TCF4-238	ENST00000568169	FAM236C	P0DP71	79 aa		5.65	□□□□□ -1.5
TCF4-238	ENST00000568169	HIST1H2BK	O60814	126 aa		5.64	□□□□□ -1.51
TCF4-238	ENST00000568169	HIST1H2BJ	P06899	126 aa		5.64	□□□□□ -1.51
TCF4-238	ENST00000568169	HIST1H2BO	P23527	126 aa		5.64	□□□□□ -1.51
TCF4-238	ENST00000568169	HIST1H2BB	P33778	126 aa		5.64	□□□□□ -1.51
TCF4-238	ENST00000568169	HIST1H2BD	P58876	126 aa		5.64	□□□□□ -1.51
TCF4-238	ENST00000568169	HIST1H2BC	P62807	126 aa		5.64	□□□□□ -1.51
TCF4-238	ENST00000568169	HIST2H2BE	Q16778	126 aa		5.64	□□□□□ -1.51
TCF4-238	ENST00000568169	KRTAP19-6	Q3LI70	58 aa		5.64	□□□□□ -1.51
TCF4-238	ENST00000568169	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	5.64	□□□□□ -1.51
TCF4-238	ENST00000568169	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	5.64	□□□□□ -1.51
TCF4-238	ENST00000568169	MPLKIP	Q8TAP9	179 aa		5.64	□□□□□ -1.51
TCF4-238	ENST00000568169	PPDPFL	Q8WWR9	84 aa		5.64	□□□□□ -1.51
TCF4-238	ENST00000568169	HIST1H2BH	Q93079	126 aa		5.64	□□□□□ -1.51
TCF4-238	ENST00000568169	HIST1H2BN	Q99877	126 aa		5.64	□□□□□ -1.51
TCF4-238	ENST00000568169	HIST1H2BM	Q99879	126 aa		5.64	□□□□□ -1.51
TCF4-238	ENST00000568169	LINC00846	Q9NV44	126 aa		5.64	□□□□□ -1.51
TCF4-238	ENST00000568169	SS18L2	Q9UHA2	77 aa		5.64	□□□□□ -1.51
TCF4-238	ENST00000568169		H3BUT2	72 aa		5.63	□□□□□ -1.51
TCF4-238	ENST00000568169	SCGB1D1	O95968	90 aa		5.63	□□□□□ -1.51
TCF4-238	ENST00000568169	SNHG12	Q9BXW3	62 aa		5.63	□□□□□ -1.51
TCF4-238	ENST00000568169	SYNE2	Q8WXH0	6885 aa	Known RBP	5.63	□□□□□ -1.51
TCF4-238	ENST00000568169	HRES1	P13985	223 aa		5.62	□□□□□ -1.51
TCF4-238	ENST00000568169	KRTDAP	P60985	99 aa		5.61	□□□□□ -1.51
TCF4-238	ENST00000568169	RBM12B-AS1	Q9P1G2	102 aa		5.61	□□□□□ -1.51
TCF4-238	ENST00000568169	DSCR10	P59022	87 aa		5.6	□□□□□ -1.51
TCF4-238	ENST00000568169	TEN1	Q86WV5	123 aa		5.59	□□□□□ -1.51
TCF4-238	ENST00000568169	KRTAP6-3	Q3LI67	103 aa		5.58	□□□□□ -1.52
TCF4-238	ENST00000568169	ATOH7	Q8N100	152 aa		5.58	□□□□□ -1.52
TCF4-238	ENST00000568169		A0A087WSZ3	146 aa		5.57	□□□□□ -1.52
TCF4-238	ENST00000568169	NOTCH2NL	Q7Z3S9	236 aa		5.57	□□□□□ -1.52
TCF4-238	ENST00000568169	LINC00313	P59037	77 aa		5.55	□□□□□ -1.52
TCF4-238	ENST00000568169	COA6	Q5JTJ3	125 aa	Known RBP	5.55	□□□□□ -1.52
TCF4-238	ENST00000568169	BVES-AS1	Q5T3Y7	98 aa		5.55	□□□□□ -1.52
TCF4-238	ENST00000568169	NDUFV3	P56181	108 aa	Known RBP	5.53	□□□□□ -1.52
TCF4-238	ENST00000568169	SNRPE	P62304	92 aa	Known RBP	5.53	□□□□□ -1.52
TCF4-238	ENST00000568169	SIGMAR1	Q99720	223 aa		5.53	□□□□□ -1.52
TCF4-238	ENST00000568169	C12orf57	Q99622	126 aa		5.52	□□□□□ -1.53
TCF4-238	ENST00000568169	IGKV4-1	P06312	121 aa		5.49	□□□□□ -1.53
TCF4-238	ENST00000568169	MTURN	Q8N3F0	131 aa		5.49	□□□□□ -1.53
TCF4-238	ENST00000568169		A0A1W2PNM2	257 aa		5.48	□□□□□ -1.53
TCF4-238	ENST00000568169		H3BMG7	143 aa		5.48	□□□□□ -1.53
TCF4-238	ENST00000568169		A8MWP4	228 aa		5.46	□□□□□ -1.54
TCF4-238	ENST00000568169	SNCG	O76070	127 aa		5.46	□□□□□ -1.54
TCF4-238	ENST00000568169	FAM218A	Q96MZ4	157 aa		5.46	□□□□□ -1.54
TCF4-238	ENST00000568169		H0YGX0	51 aa		5.45	□□□□□ -1.54
TCF4-238	ENST00000568169		Q8N9P0	234 aa	Predicted RBP	5.43	□□□□□ -1.54
TCF4-238	ENST00000568169	HIST1H4G	Q99525	98 aa		5.43	□□□□□ -1.54
TCF4-238	ENST00000568169	LINC00472	Q9H8W2	130 aa		5.43	□□□□□ -1.54
TCF4-238	ENST00000568169	IGHV6-1	A0A0B4J1U7	121 aa		5.42	□□□□□ -1.54
TCF4-238	ENST00000568169	TRBV7-4	A0A0J9YYF1	115 aa		5.42	□□□□□ -1.54
TCF4-238	ENST00000568169	HSBP1L1	C9JCN9	74 aa		5.42	□□□□□ -1.54
TCF4-238	ENST00000568169	FABP2	P12104	132 aa		5.42	□□□□□ -1.54
TCF4-238	ENST00000568169	SPINK7	P58062	85 aa		5.42	□□□□□ -1.54

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