RNA–Protein interactions for RNA: ENST00000567811.1

SMPD3-210, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-210ENST00000567811 CFC1P0CG37 223 aa3.95□□□□□ -1.78
SMPD3-210ENST00000567811 SPATA45Q537H7 98 aa3.95□□□□□ -1.78
SMPD3-210ENST00000567811 OCIAD2Q56VL3 154 aa3.95□□□□□ -1.78
SMPD3-210ENST00000567811 Q6ZQY7 126 aa3.95□□□□□ -1.78
SMPD3-210ENST00000567811 C12orf57Q99622 126 aa3.95□□□□□ -1.78
SMPD3-210ENST00000567811 HIGD1BQ9P298 99 aa3.95□□□□□ -1.78
SMPD3-210ENST00000567811 SNCGO76070 127 aa3.94□□□□□ -1.78
SMPD3-210ENST00000567811 TCL1BO95988 128 aa3.94□□□□□ -1.78
SMPD3-210ENST00000567811 LCE2AQ5TA79 106 aaPredicted RBP3.94□□□□□ -1.78
SMPD3-210ENST00000567811 C1orf195Q5TG92 126 aa3.94□□□□□ -1.78
SMPD3-210ENST00000567811 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.94□□□□□ -1.78
SMPD3-210ENST00000567811 RAB37Q96AX2 223 aa3.94□□□□□ -1.78
SMPD3-210ENST00000567811 SNHG12Q9BXW3 62 aa3.94□□□□□ -1.78
SMPD3-210ENST00000567811 PAM16Q9Y3D7 125 aa3.94□□□□□ -1.78
SMPD3-210ENST00000567811 C9orf92A6NGG3 77 aa3.93□□□□□ -1.78
SMPD3-210ENST00000567811 H0YGX0 51 aa3.93□□□□□ -1.78
SMPD3-210ENST00000567811 Q6JHZ5 121 aa3.93□□□□□ -1.78
SMPD3-210ENST00000567811 VAMP8Q9BV40 100 aa3.93□□□□□ -1.78
SMPD3-210ENST00000567811 KRTAP4-1Q9BYQ7 146 aa3.93□□□□□ -1.78
SMPD3-210ENST00000567811 IGLV8-61A0A075B6I0 122 aa3.92□□□□□ -1.78
SMPD3-210ENST00000567811 PPDPFLQ8WWR9 84 aa3.92□□□□□ -1.78
SMPD3-210ENST00000567811 A0A0B4J2C4 111 aa3.91□□□□□ -1.78
SMPD3-210ENST00000567811 IGFL1Q6UW32 110 aa3.91□□□□□ -1.78
SMPD3-210ENST00000567811 C2orf91Q6ZV80 131 aa3.91□□□□□ -1.78
SMPD3-210ENST00000567811 CEND1Q8N111 149 aa3.91□□□□□ -1.78
SMPD3-210ENST00000567811 PRO1854Q9UHT4 67 aa3.91□□□□□ -1.78
SMPD3-210ENST00000567811 PCOTHQ58A44 107 aa3.9□□□□□ -1.79
SMPD3-210ENST00000567811 FAT4Q6V0I7 4981 aa3.9□□□□□ -1.79
SMPD3-210ENST00000567811 TRBV7-7A0A0K0K1E9 115 aa3.89□□□□□ -1.79
SMPD3-210ENST00000567811 GHRHP01286 108 aa3.89□□□□□ -1.79
SMPD3-210ENST00000567811 CLEC2BQ92478 149 aa3.89□□□□□ -1.79
SMPD3-210ENST00000567811 A0A1B0GX51 115 aa3.88□□□□□ -1.79
SMPD3-210ENST00000567811 NDUFV3P56181 108 aaKnown RBP3.88□□□□□ -1.79
SMPD3-210ENST00000567811 H3BUT2 72 aa3.87□□□□□ -1.79
SMPD3-210ENST00000567811 FXYD2P54710 66 aa3.87□□□□□ -1.79
SMPD3-210ENST00000567811 PYY3Q5JQD4 70 aa3.87□□□□□ -1.79
SMPD3-210ENST00000567811 FAM218AQ96MZ4 157 aa3.87□□□□□ -1.79
SMPD3-210ENST00000567811 H3BMG7 143 aa3.86□□□□□ -1.79
SMPD3-210ENST00000567811 LST1O00453 97 aa3.86□□□□□ -1.79
SMPD3-210ENST00000567811 FABP2P12104 132 aa3.86□□□□□ -1.79
SMPD3-210ENST00000567811 TEN1Q86WV5 123 aa3.86□□□□□ -1.79
SMPD3-210ENST00000567811 RPL37P61927 97 aaKnown RBP3.85□□□□□ -1.79
SMPD3-210ENST00000567811 Q6Q795 121 aa3.85□□□□□ -1.79
SMPD3-210ENST00000567811 H3BQ85 93 aa3.84□□□□□ -1.79
SMPD3-210ENST00000567811 TRIAP1O43715 76 aa3.84□□□□□ -1.79
SMPD3-210ENST00000567811 COX6CP09669 75 aa3.84□□□□□ -1.79
SMPD3-210ENST00000567811 PSMB2P49721 201 aa3.84□□□□□ -1.79
SMPD3-210ENST00000567811 HSD52Q0P140 79 aa3.84□□□□□ -1.79
SMPD3-210ENST00000567811 KRTAP9-2Q9BYQ4 174 aa3.84□□□□□ -1.79
SMPD3-210ENST00000567811 LCE2CQ5TA81 110 aa3.83□□□□□ -1.8
SMPD3-210ENST00000567811 UQCR10Q9UDW1 63 aa3.83□□□□□ -1.8
SMPD3-210ENST00000567811 SS18L2Q9UHA2 77 aa3.83□□□□□ -1.8
SMPD3-210ENST00000567811 TMEM256-PLSCR3K7ERE1 68 aa3.82□□□□□ -1.8
SMPD3-210ENST00000567811 DNAL4O96015 105 aa3.82□□□□□ -1.8
SMPD3-210ENST00000567811 OBSCN-AS1Q96MR7 158 aa3.82□□□□□ -1.8
SMPD3-210ENST00000567811 ORMDL1Q9P0S3 153 aa3.82□□□□□ -1.8
SMPD3-210ENST00000567811 A0A087WSZ3 146 aa3.81□□□□□ -1.8
SMPD3-210ENST00000567811 SCGB1C2P0DMR2 95 aa3.81□□□□□ -1.8
SMPD3-210ENST00000567811 KRTAP19-2Q3LHN2 52 aa3.81□□□□□ -1.8
SMPD3-210ENST00000567811 ATP11AUNQ6ZP68 121 aa3.81□□□□□ -1.8
SMPD3-210ENST00000567811 ANKRD29Q8N6D5 301 aa3.81□□□□□ -1.8
SMPD3-210ENST00000567811 Q96NJ1 140 aa3.81□□□□□ -1.8
SMPD3-210ENST00000567811 A0A1W2PNM2 257 aa3.8□□□□□ -1.8
SMPD3-210ENST00000567811 K7ERJ3 54 aa3.8□□□□□ -1.8
SMPD3-210ENST00000567811 UBE2V1Q13404 147 aa3.79□□□□□ -1.8
SMPD3-210ENST00000567811 Q75L30 129 aa3.79□□□□□ -1.8
SMPD3-210ENST00000567811 TRBV7-4A0A0J9YYF1 115 aa3.78□□□□□ -1.8
SMPD3-210ENST00000567811 TRACP01848 142 aa3.77□□□□□ -1.81
SMPD3-210ENST00000567811 LINC00313P59037 77 aa3.77□□□□□ -1.81
SMPD3-210ENST00000567811 MT1HP80294 61 aa3.77□□□□□ -1.81
SMPD3-210ENST00000567811 A0A1B0GV72 72 aa3.76□□□□□ -1.81
SMPD3-210ENST00000567811 CCKP06307 115 aa3.76□□□□□ -1.81
SMPD3-210ENST00000567811 IGKV4-1P06312 121 aa3.76□□□□□ -1.81
SMPD3-210ENST00000567811 BAALC-AS2P0C853 105 aa3.76□□□□□ -1.81
SMPD3-210ENST00000567811 RBM3P98179 157 aaKnown RBP3.76□□□□□ -1.81
SMPD3-210ENST00000567811 COX6B2Q6YFQ2 88 aa3.76□□□□□ -1.81
SMPD3-210ENST00000567811 A8MUU9 505 aa3.75□□□□□ -1.81
SMPD3-210ENST00000567811 LCE2DQ5TA82 110 aaPredicted RBP3.75□□□□□ -1.81
SMPD3-210ENST00000567811 C20orf166-AS1Q96NR2 134 aa3.75□□□□□ -1.81
SMPD3-210ENST00000567811 M0R2T5 61 aa3.74□□□□□ -1.81
SMPD3-210ENST00000567811 DSCR10P59022 87 aa3.74□□□□□ -1.81
SMPD3-210ENST00000567811 DEFB116Q30KQ4 102 aa3.74□□□□□ -1.81
SMPD3-210ENST00000567811 DSCR8Q96T75 97 aa3.74□□□□□ -1.81
SMPD3-210ENST00000567811 LINC00472Q9H8W2 130 aa3.74□□□□□ -1.81
SMPD3-210ENST00000567811 M0R143 59 aa3.73□□□□□ -1.81
SMPD3-210ENST00000567811 SIGMAR1Q99720 223 aa3.73□□□□□ -1.81
SMPD3-210ENST00000567811 VPS25Q9BRG1 176 aa3.73□□□□□ -1.81
SMPD3-210ENST00000567811 C9JAW5 83 aa3.72□□□□□ -1.81
SMPD3-210ENST00000567811 TRBV20-1A0A075B6N2 111 aa3.71□□□□□ -1.82
SMPD3-210ENST00000567811 ATXN8Q156A1 80 aa3.71□□□□□ -1.82
SMPD3-210ENST00000567811 NOTCH2NLQ7Z3S9 236 aa3.71□□□□□ -1.82
SMPD3-210ENST00000567811 IGHV6-1A0A0B4J1U7 121 aa3.7□□□□□ -1.82
SMPD3-210ENST00000567811 KRTAP9-6A0A140TA67 174 aa3.7□□□□□ -1.82
SMPD3-210ENST00000567811 JMJD7-PLA2G4BH0Y9G9 81 aa3.7□□□□□ -1.82
SMPD3-210ENST00000567811 LORP23490 312 aaPredicted RBP3.7□□□□□ -1.82
SMPD3-210ENST00000567811 KRTAP10-6P60371 365 aaPredicted RBP3.7□□□□□ -1.82
SMPD3-210ENST00000567811 KRTAP16-1A8MUX0 517 aa3.69□□□□□ -1.82
SMPD3-210ENST00000567811 Q6ZQT0 140 aa3.69□□□□□ -1.82
SMPD3-210ENST00000567811 NAA38Q9BRA0 125 aaKnown RBP3.69□□□□□ -1.82
SMPD3-210ENST00000567811 A0A1B0GW54 56 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms