RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	FAM236B	A0A1B0GV22	79 aa		4.1	□□□□□ -1.75
SF3B3-209	ENST00000567635	COX7C	P15954	63 aa		4.1	□□□□□ -1.75
SF3B3-209	ENST00000567635	KRTAP13-1	Q8IUC0	172 aa		4.1	□□□□□ -1.75
SF3B3-209	ENST00000567635		A0A087X002	238 aa		4.09	□□□□□ -1.75
SF3B3-209	ENST00000567635		A0A0U1RRA0	63 aa		4.09	□□□□□ -1.75
SF3B3-209	ENST00000567635		M0R378	163 aa		4.09	□□□□□ -1.75
SF3B3-209	ENST00000567635	ATOX1	O00244	68 aa		4.09	□□□□□ -1.75
SF3B3-209	ENST00000567635	TRAC	P01848	142 aa		4.09	□□□□□ -1.75
SF3B3-209	ENST00000567635	CFC1B	P0CG36	223 aa		4.09	□□□□□ -1.75
SF3B3-209	ENST00000567635	CFC1	P0CG37	223 aa		4.09	□□□□□ -1.75
SF3B3-209	ENST00000567635	SEC61G	P60059	68 aa		4.09	□□□□□ -1.75
SF3B3-209	ENST00000567635	FAM19A1	Q7Z5A9	133 aa		4.09	□□□□□ -1.75
SF3B3-209	ENST00000567635	LINC00643	Q86TS7	51 aa		4.09	□□□□□ -1.75
SF3B3-209	ENST00000567635		Q8NDZ9	215 aa		4.09	□□□□□ -1.75
SF3B3-209	ENST00000567635	TYMSOS	Q8TAI1	123 aa		4.09	□□□□□ -1.75
SF3B3-209	ENST00000567635	LITAF	Q99732	161 aa		4.09	□□□□□ -1.75
SF3B3-209	ENST00000567635	ANAPC11	Q9NYG5	84 aa		4.09	□□□□□ -1.75
SF3B3-209	ENST00000567635	COX6C	P09669	75 aa		4.08	□□□□□ -1.76
SF3B3-209	ENST00000567635		Q1RN00	199 aa		4.08	□□□□□ -1.76
SF3B3-209	ENST00000567635	FAM229B	Q4G0N7	80 aa		4.08	□□□□□ -1.76
SF3B3-209	ENST00000567635	ADAMTSL4-AS1	Q5T5F5	129 aa		4.08	□□□□□ -1.76
SF3B3-209	ENST00000567635	MUSTN1	Q8IVN3	82 aa		4.08	□□□□□ -1.76
SF3B3-209	ENST00000567635	PRLH	P81277	87 aa		4.07	□□□□□ -1.76
SF3B3-209	ENST00000567635	PRR4	Q16378	134 aa		4.07	□□□□□ -1.76
SF3B3-209	ENST00000567635	MIR7-3HG	Q8N6C7	128 aa		4.07	□□□□□ -1.76
SF3B3-209	ENST00000567635	TEX49	A0A1B0GTD5	131 aa		4.06	□□□□□ -1.76
SF3B3-209	ENST00000567635	KRTAP13-2	Q52LG2	175 aa		4.06	□□□□□ -1.76
SF3B3-209	ENST00000567635	COPS9	Q8WXC6	57 aa		4.06	□□□□□ -1.76
SF3B3-209	ENST00000567635	PRO0628	Q9UI54	55 aa		4.06	□□□□□ -1.76
SF3B3-209	ENST00000567635	KCNQ1DN	Q9H478	68 aa		4.05	□□□□□ -1.76
SF3B3-209	ENST00000567635	LRP2	P98164	4655 aa		4.04	□□□□□ -1.76
SF3B3-209	ENST00000567635	PRY	O14603	147 aa		4.04	□□□□□ -1.76
SF3B3-209	ENST00000567635	NCR3	O14931	201 aa		4.04	□□□□□ -1.76
SF3B3-209	ENST00000567635	LINC00308	Q8TCZ7	52 aa		4.04	□□□□□ -1.76
SF3B3-209	ENST00000567635	HIGD2A	Q9BW72	106 aa		4.04	□□□□□ -1.76
SF3B3-209	ENST00000567635	TRBV10-3	A0A0K0K1G6	114 aa		4.03	□□□□□ -1.76
SF3B3-209	ENST00000567635	SOSTDC1	Q6X4U4	206 aa		4.03	□□□□□ -1.76
SF3B3-209	ENST00000567635	LINC00337	Q8N6G1	96 aa		4.03	□□□□□ -1.76
SF3B3-209	ENST00000567635	DAND5	Q8N907	189 aa		4.03	□□□□□ -1.76
SF3B3-209	ENST00000567635	LINC00304	Q8N9R0	145 aa		4.03	□□□□□ -1.76
SF3B3-209	ENST00000567635	ETDC	A0A1B0GVM5	59 aa		4.02	□□□□□ -1.77
SF3B3-209	ENST00000567635	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	4.02	□□□□□ -1.77
SF3B3-209	ENST00000567635	LST1	O00453	97 aa		4.02	□□□□□ -1.77
SF3B3-209	ENST00000567635	NDUFC2	O95298	119 aa		4.02	□□□□□ -1.77
SF3B3-209	ENST00000567635	SPRR1A	P35321	89 aa		4.02	□□□□□ -1.77
SF3B3-209	ENST00000567635	HIST1H4A	P62805	103 aa	Known RBP	4.02	□□□□□ -1.77
SF3B3-209	ENST00000567635	HRCT1	Q6UXD1	115 aa		4.02	□□□□□ -1.77
SF3B3-209	ENST00000567635	SERP2	Q8N6R1	65 aa		4.02	□□□□□ -1.77
SF3B3-209	ENST00000567635	SMCR5	Q8TEV8	140 aa		4.02	□□□□□ -1.77
SF3B3-209	ENST00000567635	SPRR4	Q96PI1	79 aa		4.02	□□□□□ -1.77
SF3B3-209	ENST00000567635	KRTAP4-12	Q9BQ66	201 aa		4.02	□□□□□ -1.77
SF3B3-209	ENST00000567635	KRTAP9-2	Q9BYQ4	174 aa		4.02	□□□□□ -1.77
SF3B3-209	ENST00000567635	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.02	□□□□□ -1.77
SF3B3-209	ENST00000567635	RNF213	Q63HN8	5207 aa		4.01	□□□□□ -1.77
SF3B3-209	ENST00000567635	hADV29S1	A0JD25	119 aa		4.01	□□□□□ -1.77
SF3B3-209	ENST00000567635		H7C2G1	150 aa		4.01	□□□□□ -1.77
SF3B3-209	ENST00000567635	TRIAP1	O43715	76 aa		4.01	□□□□□ -1.77
SF3B3-209	ENST00000567635	NPC2	P61916	151 aa		4.01	□□□□□ -1.77
SF3B3-209	ENST00000567635		Q5XG85	94 aa		4.01	□□□□□ -1.77
SF3B3-209	ENST00000567635		V9GYY9	64 aa		4.01	□□□□□ -1.77
SF3B3-209	ENST00000567635	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4	□□□□□ -1.77
SF3B3-209	ENST00000567635	C4orf26	Q17RF5	130 aa		4	□□□□□ -1.77
SF3B3-209	ENST00000567635	S100A7L2	Q5SY68	101 aa		4	□□□□□ -1.77
SF3B3-209	ENST00000567635	SPAG11A	Q6PDA7	123 aa		4	□□□□□ -1.77
SF3B3-209	ENST00000567635	TRAV13-2	A0A0B4J235	113 aa		3.99	□□□□□ -1.77
SF3B3-209	ENST00000567635	KRTAP9-6	A0A140TA67	174 aa		3.99	□□□□□ -1.77
SF3B3-209	ENST00000567635	IGLV6-57	P01721	117 aa		3.99	□□□□□ -1.77
SF3B3-209	ENST00000567635	RETNLB	Q9BQ08	111 aa		3.99	□□□□□ -1.77
SF3B3-209	ENST00000567635	ERC2-IT1	O76042	136 aa		3.98	□□□□□ -1.77
SF3B3-209	ENST00000567635		Q6JHZ5	121 aa		3.98	□□□□□ -1.77
SF3B3-209	ENST00000567635	KRTAP19-1	Q8IUB9	90 aa		3.98	□□□□□ -1.77
SF3B3-209	ENST00000567635	SERP1	Q9Y6X1	66 aa		3.98	□□□□□ -1.77
SF3B3-209	ENST00000567635	IGLV7-46	A0A075B6I9	117 aa		3.97	□□□□□ -1.77
SF3B3-209	ENST00000567635	TRAV23DV6	A0A075B6W5	121 aa		3.97	□□□□□ -1.77
SF3B3-209	ENST00000567635	FAM236D	A0A1B0GTK5	79 aa		3.97	□□□□□ -1.77
SF3B3-209	ENST00000567635	FAM236C	P0DP71	79 aa		3.97	□□□□□ -1.77
SF3B3-209	ENST00000567635	LINC00483	Q53H64	154 aa		3.97	□□□□□ -1.77
SF3B3-209	ENST00000567635		Q6ZRX8	168 aa		3.97	□□□□□ -1.77
SF3B3-209	ENST00000567635		Q8NBF4	154 aa		3.97	□□□□□ -1.77
SF3B3-209	ENST00000567635	DSCR8	Q96T75	97 aa		3.97	□□□□□ -1.77
SF3B3-209	ENST00000567635		Q9BRP9	147 aa		3.97	□□□□□ -1.77
SF3B3-209	ENST00000567635	SMIM26	A0A096LP01	95 aa		3.96	□□□□□ -1.78
SF3B3-209	ENST00000567635	ZNF73	O43830	326 aa	Predicted RBP	3.96	□□□□□ -1.78
SF3B3-209	ENST00000567635	SPINK1	P00995	79 aa		3.96	□□□□□ -1.78
SF3B3-209	ENST00000567635	KRTAP19-4	Q3LI73	84 aa		3.96	□□□□□ -1.78
SF3B3-209	ENST00000567635	C1orf195	Q5TG92	126 aa		3.96	□□□□□ -1.78
SF3B3-209	ENST00000567635	SSBP3-AS1	Q7Z2R9	100 aa		3.96	□□□□□ -1.78
SF3B3-209	ENST00000567635	IGLV9-49	A0A0B4J1Y8	123 aa		3.95	□□□□□ -1.78
SF3B3-209	ENST00000567635	DNAL4	O96015	105 aa		3.95	□□□□□ -1.78
SF3B3-209	ENST00000567635	LCE3B	Q5TA77	95 aa		3.95	□□□□□ -1.78
SF3B3-209	ENST00000567635	ATP5EP2	Q5VTU8	51 aa		3.95	□□□□□ -1.78
SF3B3-209	ENST00000567635	CLEC2B	Q92478	149 aa		3.95	□□□□□ -1.78
SF3B3-209	ENST00000567635	LPA	P08519	4548 aa		3.95	□□□□□ -1.78
SF3B3-209	ENST00000567635	ATP5E	P56381	51 aa	Predicted RBP	3.94	□□□□□ -1.78
SF3B3-209	ENST00000567635	MOBP	Q13875	183 aa		3.94	□□□□□ -1.78
SF3B3-209	ENST00000567635	TPRXL	Q17RH7	258 aa		3.94	□□□□□ -1.78
SF3B3-209	ENST00000567635	FP248	Q71RG6	208 aa	Predicted RBP	3.94	□□□□□ -1.78
SF3B3-209	ENST00000567635		H0YGX0	51 aa		3.93	□□□□□ -1.78
SF3B3-209	ENST00000567635	BAALC-AS2	P0C853	105 aa		3.93	□□□□□ -1.78
SF3B3-209	ENST00000567635	ST20-AS1	Q8NBB2	130 aa		3.93	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms