RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 F8WEM9 126 aa7.89□□□□□ -1.15
PALB2-205ENST00000567003 C20orf202A1L168 122 aa7.88□□□□□ -1.15
PALB2-205ENST00000567003 MT2AP02795 61 aa7.88□□□□□ -1.15
PALB2-205ENST00000567003 IGFL1Q6UW32 110 aa7.88□□□□□ -1.15
PALB2-205ENST00000567003 SCGB1D4Q6XE38 83 aa7.88□□□□□ -1.15
PALB2-205ENST00000567003 SMIM11BQ8TCY0 68 aa7.88□□□□□ -1.15
PALB2-205ENST00000567003 Q96NJ1 140 aa7.87□□□□□ -1.15
PALB2-205ENST00000567003 NHP2Q9NX24 153 aaKnown RBP7.87□□□□□ -1.15
PALB2-205ENST00000567003 A4D1N5 150 aa7.86□□□□□ -1.15
PALB2-205ENST00000567003 MUSTN1Q8IVN3 82 aa7.86□□□□□ -1.15
PALB2-205ENST00000567003 CLEC2BQ92478 149 aa7.85□□□□□ -1.15
PALB2-205ENST00000567003 MT1FP04733 61 aa7.84□□□□□ -1.15
PALB2-205ENST00000567003 PET117Q6UWS5 81 aa7.84□□□□□ -1.15
PALB2-205ENST00000567003 KRTAP4-12Q9BQ66 201 aa7.84□□□□□ -1.15
PALB2-205ENST00000567003 COLCA2A8K830 154 aa7.83□□□□□ -1.16
PALB2-205ENST00000567003 IFITM1P13164 125 aa7.83□□□□□ -1.16
PALB2-205ENST00000567003 Q6JHZ5 121 aa7.83□□□□□ -1.16
PALB2-205ENST00000567003 SLC7A5P1Q8MH63 180 aa7.83□□□□□ -1.16
PALB2-205ENST00000567003 Q6ZQY7 126 aa7.82□□□□□ -1.16
PALB2-205ENST00000567003 C3orf79P0CE67 100 aa7.81□□□□□ -1.16
PALB2-205ENST00000567003 COPS9Q8WXC6 57 aa7.81□□□□□ -1.16
PALB2-205ENST00000567003 TRAV13-2A0A0B4J235 113 aa7.8□□□□□ -1.16
PALB2-205ENST00000567003 LINC00575Q6W349 94 aa7.8□□□□□ -1.16
PALB2-205ENST00000567003 SYNE2Q8WXH0 6885 aaKnown RBP7.79□□□□□ -1.16
PALB2-205ENST00000567003 TRBV20-1A0A075B6N2 111 aa7.79□□□□□ -1.16
PALB2-205ENST00000567003 LST1O00453 97 aa7.79□□□□□ -1.16
PALB2-205ENST00000567003 OCIAD2Q56VL3 154 aa7.79□□□□□ -1.16
PALB2-205ENST00000567003 C20orf166-AS1Q96NR2 134 aa7.79□□□□□ -1.16
PALB2-205ENST00000567003 MACF1Q9UPN3 7388 aaKnown RBP7.78□□□□□ -1.16
PALB2-205ENST00000567003 A8MUU9 505 aa7.78□□□□□ -1.16
PALB2-205ENST00000567003 HIST1H2BKO60814 126 aa7.78□□□□□ -1.16
PALB2-205ENST00000567003 HIST1H2BJP06899 126 aa7.78□□□□□ -1.16
PALB2-205ENST00000567003 HIST1H2BOP23527 126 aa7.78□□□□□ -1.16
PALB2-205ENST00000567003 HIST1H2BBP33778 126 aa7.78□□□□□ -1.16
PALB2-205ENST00000567003 HIST1H2BDP58876 126 aa7.78□□□□□ -1.16
PALB2-205ENST00000567003 HIST1H2BCP62807 126 aa7.78□□□□□ -1.16
PALB2-205ENST00000567003 HIST2H2BEQ16778 126 aa7.78□□□□□ -1.16
PALB2-205ENST00000567003 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.78□□□□□ -1.16
PALB2-205ENST00000567003 HIST1H2BHQ93079 126 aa7.78□□□□□ -1.16
PALB2-205ENST00000567003 HIST1H2BNQ99877 126 aa7.78□□□□□ -1.16
PALB2-205ENST00000567003 HIST1H2BMQ99879 126 aa7.78□□□□□ -1.16
PALB2-205ENST00000567003 KRTAP9-3Q9BYQ3 159 aa7.78□□□□□ -1.16
PALB2-205ENST00000567003 hADV29S1A0JD25 119 aa7.77□□□□□ -1.17
PALB2-205ENST00000567003 H3BUT2 72 aa7.77□□□□□ -1.17
PALB2-205ENST00000567003 Q6ZVH6 145 aa7.77□□□□□ -1.17
PALB2-205ENST00000567003 ATOH7Q8N100 152 aa7.77□□□□□ -1.17
PALB2-205ENST00000567003 KRTDAPP60985 99 aa7.76□□□□□ -1.17
PALB2-205ENST00000567003 VAMP3Q15836 100 aa7.75□□□□□ -1.17
PALB2-205ENST00000567003 FAM236DA0A1B0GTK5 79 aa7.74□□□□□ -1.17
PALB2-205ENST00000567003 FAM236CP0DP71 79 aa7.74□□□□□ -1.17
PALB2-205ENST00000567003 KRTAP10-10P60014 251 aa7.74□□□□□ -1.17
PALB2-205ENST00000567003 KRTAP16-1A8MUX0 517 aa7.73□□□□□ -1.17
PALB2-205ENST00000567003 DSCR10P59022 87 aa7.72□□□□□ -1.17
PALB2-205ENST00000567003 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.69□□□□□ -1.18
PALB2-205ENST00000567003 SNHG12Q9BXW3 62 aa7.69□□□□□ -1.18
PALB2-205ENST00000567003 SS18L2Q9UHA2 77 aa7.67□□□□□ -1.18
PALB2-205ENST00000567003 HRES1P13985 223 aa7.66□□□□□ -1.18
PALB2-205ENST00000567003 MPLKIPQ8TAP9 179 aa7.65□□□□□ -1.18
PALB2-205ENST00000567003 C12orf57Q99622 126 aa7.65□□□□□ -1.18
PALB2-205ENST00000567003 A0A087WSZ3 146 aa7.64□□□□□ -1.19
PALB2-205ENST00000567003 PPDPFLQ8WWR9 84 aa7.64□□□□□ -1.19
PALB2-205ENST00000567003 SCGB1D1O95968 90 aa7.62□□□□□ -1.19
PALB2-205ENST00000567003 SIGMAR1Q99720 223 aa7.62□□□□□ -1.19
PALB2-205ENST00000567003 TEN1Q86WV5 123 aa7.61□□□□□ -1.19
PALB2-205ENST00000567003 RBM12B-AS1Q9P1G2 102 aa7.61□□□□□ -1.19
PALB2-205ENST00000567003 KRTAP19-6Q3LI70 58 aa7.6□□□□□ -1.19
PALB2-205ENST00000567003 COA6Q5JTJ3 125 aaKnown RBP7.6□□□□□ -1.19
PALB2-205ENST00000567003 KRTAP23-1A1A580 65 aa7.59□□□□□ -1.19
PALB2-205ENST00000567003 BVES-AS1Q5T3Y7 98 aa7.58□□□□□ -1.2
PALB2-205ENST00000567003 LCE3BQ5TA77 95 aa7.58□□□□□ -1.2
PALB2-205ENST00000567003 KRTAP3-1Q9BYR8 98 aa7.58□□□□□ -1.2
PALB2-205ENST00000567003 NOTCH2NLQ7Z3S9 236 aa7.57□□□□□ -1.2
PALB2-205ENST00000567003 NDUFV3P56181 108 aaKnown RBP7.56□□□□□ -1.2
PALB2-205ENST00000567003 LINC00313P59037 77 aa7.56□□□□□ -1.2
PALB2-205ENST00000567003 LINC00846Q9NV44 126 aa7.55□□□□□ -1.2
PALB2-205ENST00000567003 FAM218AQ96MZ4 157 aa7.54□□□□□ -1.2
PALB2-205ENST00000567003 A0A1W2PNM2 257 aa7.53□□□□□ -1.2
PALB2-205ENST00000567003 IGKV4-1P06312 121 aa7.52□□□□□ -1.21
PALB2-205ENST00000567003 SNRPEP62304 92 aaKnown RBP7.52□□□□□ -1.21
PALB2-205ENST00000567003 H3BMG7 143 aa7.51□□□□□ -1.21
PALB2-205ENST00000567003 DEFB116Q30KQ4 102 aa7.5□□□□□ -1.21
PALB2-205ENST00000567003 KRTAP6-3Q3LI67 103 aa7.49□□□□□ -1.21
PALB2-205ENST00000567003 HIST1H4GQ99525 98 aa7.49□□□□□ -1.21
PALB2-205ENST00000567003 FABP2P12104 132 aa7.47□□□□□ -1.21
PALB2-205ENST00000567003 LCE4AQ5TA78 99 aa7.47□□□□□ -1.21
PALB2-205ENST00000567003 A0A1B0GV72 72 aa7.46□□□□□ -1.22
PALB2-205ENST00000567003 HSBP1L1C9JCN9 74 aa7.46□□□□□ -1.22
PALB2-205ENST00000567003 IGHV6-1A0A0B4J1U7 121 aa7.45□□□□□ -1.22
PALB2-205ENST00000567003 H0YGX0 51 aa7.43□□□□□ -1.22
PALB2-205ENST00000567003 SNCGO76070 127 aa7.43□□□□□ -1.22
PALB2-205ENST00000567003 Q8N9P0 234 aaPredicted RBP7.43□□□□□ -1.22
PALB2-205ENST00000567003 MTURNQ8N3F0 131 aa7.42□□□□□ -1.22
PALB2-205ENST00000567003 RAB37Q96AX2 223 aa7.42□□□□□ -1.22
PALB2-205ENST00000567003 SVIPQ8NHG7 77 aa7.41□□□□□ -1.22
PALB2-205ENST00000567003 HIST1H2BLQ99880 126 aa7.41□□□□□ -1.22
PALB2-205ENST00000567003 LINC00472Q9H8W2 130 aa7.41□□□□□ -1.22
PALB2-205ENST00000567003 NEBP20929 6669 aa7.4□□□□□ -1.22
PALB2-205ENST00000567003 HIST3H2BBQ8N257 126 aa7.4□□□□□ -1.22
PALB2-205ENST00000567003 KRTAP9-9Q9BYP9 154 aa7.4□□□□□ -1.22
PALB2-205ENST00000567003 KRTAP9-4Q9BYQ2 154 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms