RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 Q6ZQY7 126 aa8.09□□□□□ -1.11
CLK3-218ENST00000566926 Q9BRP9 147 aa8.09□□□□□ -1.11
CLK3-218ENST00000566926 TNXBP22105 4242 aa8.08□□□□□ -1.12
CLK3-218ENST00000566926 KRTAP13-1Q8IUC0 172 aa8.07□□□□□ -1.12
CLK3-218ENST00000566926 PRLHP81277 87 aa8.06□□□□□ -1.12
CLK3-218ENST00000566926 SMCR5Q8TEV8 140 aa8.06□□□□□ -1.12
CLK3-218ENST00000566926 KRTAP1-4P0C5Y4 121 aa8.05□□□□□ -1.12
CLK3-218ENST00000566926 SMCPP49901 116 aaPredicted RBP8.05□□□□□ -1.12
CLK3-218ENST00000566926 TEN1Q86WV5 123 aa8.05□□□□□ -1.12
CLK3-218ENST00000566926 MTURNQ8N3F0 131 aa8.05□□□□□ -1.12
CLK3-218ENST00000566926 PRR26Q8N8Z3 221 aa8.05□□□□□ -1.12
CLK3-218ENST00000566926 HIGD2AQ9BW72 106 aa8.05□□□□□ -1.12
CLK3-218ENST00000566926 IGLV5-48A0A075B6I7 105 aa8.04□□□□□ -1.12
CLK3-218ENST00000566926 ZNF706Q9Y5V0 76 aaPredicted RBP8.04□□□□□ -1.12
CLK3-218ENST00000566926 JMJD7-PLA2G4BH0Y9G9 81 aa8.03□□□□□ -1.12
CLK3-218ENST00000566926 TEX49A0A1B0GTD5 131 aa8.02□□□□□ -1.13
CLK3-218ENST00000566926 C21orf62-AS1Q17RA5 79 aa8.01□□□□□ -1.13
CLK3-218ENST00000566926 ETDBQ3ZM63 59 aa8.01□□□□□ -1.13
CLK3-218ENST00000566926 ERC2-IT1O76042 136 aa7.99□□□□□ -1.13
CLK3-218ENST00000566926 CRYGAP11844 174 aa7.99□□□□□ -1.13
CLK3-218ENST00000566926 LAMTOR3Q9UHA4 124 aa7.99□□□□□ -1.13
CLK3-218ENST00000566926 J3QR89 54 aa7.98□□□□□ -1.13
CLK3-218ENST00000566926 SPRR1BP22528 89 aa7.98□□□□□ -1.13
CLK3-218ENST00000566926 Q8N377 158 aa7.98□□□□□ -1.13
CLK3-218ENST00000566926 OBSCN-AS1Q96MR7 158 aa7.98□□□□□ -1.13
CLK3-218ENST00000566926 NDUFV3P56181 108 aaKnown RBP7.97□□□□□ -1.13
CLK3-218ENST00000566926 LINC01547P58512 204 aaPredicted RBP7.97□□□□□ -1.13
CLK3-218ENST00000566926 DEFB105AQ8NG35 78 aa7.97□□□□□ -1.13
CLK3-218ENST00000566926 PDE6GP18545 87 aa7.96□□□□□ -1.14
CLK3-218ENST00000566926 FAM229BQ4G0N7 80 aa7.96□□□□□ -1.14
CLK3-218ENST00000566926 ST20-AS1Q8NBB2 130 aa7.96□□□□□ -1.14
CLK3-218ENST00000566926 HMCN2Q8NDA2 5059 aa7.95□□□□□ -1.14
CLK3-218ENST00000566926 F8WEM9 126 aa7.95□□□□□ -1.14
CLK3-218ENST00000566926 RBM3P98179 157 aaKnown RBP7.95□□□□□ -1.14
CLK3-218ENST00000566926 LINC00483Q53H64 154 aa7.95□□□□□ -1.14
CLK3-218ENST00000566926 TYMSOSQ8TAI1 123 aa7.95□□□□□ -1.14
CLK3-218ENST00000566926 SPRR4Q96PI1 79 aa7.95□□□□□ -1.14
CLK3-218ENST00000566926 A0A087X002 238 aa7.93□□□□□ -1.14
CLK3-218ENST00000566926 K7ERU9 68 aa7.93□□□□□ -1.14
CLK3-218ENST00000566926 GAGE2AQ6NT46 116 aa7.93□□□□□ -1.14
CLK3-218ENST00000566926 DSCR8Q96T75 97 aa7.93□□□□□ -1.14
CLK3-218ENST00000566926 LOC110117498A0A087WWA1 95 aa7.91□□□□□ -1.14
CLK3-218ENST00000566926 ANAPC11Q9NYG5 84 aa7.91□□□□□ -1.14
CLK3-218ENST00000566926 SMIM29Q86T20 159 aa7.9□□□□□ -1.14
CLK3-218ENST00000566926 IGLV8-61A0A075B6I0 122 aa7.89□□□□□ -1.15
CLK3-218ENST00000566926 Q6JHZ5 121 aa7.89□□□□□ -1.15
CLK3-218ENST00000566926 C14orf132Q9NPU4 83 aa7.89□□□□□ -1.15
CLK3-218ENST00000566926 TRBV7-4A0A0J9YYF1 115 aa7.88□□□□□ -1.15
CLK3-218ENST00000566926 FAM240AA0A1B0GVK7 77 aa7.88□□□□□ -1.15
CLK3-218ENST00000566926 ACYP1P07311 99 aa7.88□□□□□ -1.15
CLK3-218ENST00000566926 KRTAP13-2Q52LG2 175 aa7.88□□□□□ -1.15
CLK3-218ENST00000566926 A0A1B0GW54 56 aa7.87□□□□□ -1.15
CLK3-218ENST00000566926 CCKP06307 115 aa7.86□□□□□ -1.15
CLK3-218ENST00000566926 C3orf22Q8N5N4 141 aa7.86□□□□□ -1.15
CLK3-218ENST00000566926 Q6ZQT0 140 aa7.85□□□□□ -1.15
CLK3-218ENST00000566926 LINC00304Q8N9R0 145 aa7.85□□□□□ -1.15
CLK3-218ENST00000566926 A0A1B0GV72 72 aa7.84□□□□□ -1.15
CLK3-218ENST00000566926 Q8NBF4 154 aa7.83□□□□□ -1.16
CLK3-218ENST00000566926 PRR4Q16378 134 aa7.82□□□□□ -1.16
CLK3-218ENST00000566926 C9orf153Q5TBE3 101 aa7.81□□□□□ -1.16
CLK3-218ENST00000566926 SPAG11AQ6PDA7 123 aa7.81□□□□□ -1.16
CLK3-218ENST00000566926 C4orf48Q5BLP8 95 aa7.8□□□□□ -1.16
CLK3-218ENST00000566926 SSBP3-AS1Q7Z2R9 100 aa7.8□□□□□ -1.16
CLK3-218ENST00000566926 IGLV9-49A0A0B4J1Y8 123 aa7.79□□□□□ -1.16
CLK3-218ENST00000566926 IGFL1Q6UW32 110 aa7.79□□□□□ -1.16
CLK3-218ENST00000566926 Q6Q795 121 aa7.78□□□□□ -1.16
CLK3-218ENST00000566926 UBR4Q5T4S7 5183 aa7.78□□□□□ -1.16
CLK3-218ENST00000566926 LRP2P98164 4655 aa7.77□□□□□ -1.17
CLK3-218ENST00000566926 MOBPQ13875 183 aa7.77□□□□□ -1.17
CLK3-218ENST00000566926 VPS25Q9BRG1 176 aa7.77□□□□□ -1.17
CLK3-218ENST00000566926 CD164Q04900 197 aa7.75□□□□□ -1.17
CLK3-218ENST00000566926 A0A1W2PNM2 257 aa7.74□□□□□ -1.17
CLK3-218ENST00000566926 UBL5Q9BZL1 73 aa7.74□□□□□ -1.17
CLK3-218ENST00000566926 SPINK1P00995 79 aa7.73□□□□□ -1.17
CLK3-218ENST00000566926 LINC00846Q9NV44 126 aa7.71□□□□□ -1.18
CLK3-218ENST00000566926 TRBV7-7A0A0K0K1E9 115 aa7.7□□□□□ -1.18
CLK3-218ENST00000566926 SS18L2Q9UHA2 77 aa7.7□□□□□ -1.18
CLK3-218ENST00000566926 ATP5EP2Q5VTU8 51 aa7.69□□□□□ -1.18
CLK3-218ENST00000566926 LINC00643Q86TS7 51 aa7.69□□□□□ -1.18
CLK3-218ENST00000566926 RETNLBQ9BQ08 111 aa7.69□□□□□ -1.18
CLK3-218ENST00000566926 RPS29P62273 56 aaKnown RBP7.68□□□□□ -1.18
CLK3-218ENST00000566926 CDIP1Q9H305 208 aa7.68□□□□□ -1.18
CLK3-218ENST00000566926 A0A087WSZ3 146 aa7.67□□□□□ -1.18
CLK3-218ENST00000566926 NREPQ16612 68 aa7.67□□□□□ -1.18
CLK3-218ENST00000566926 LPAP08519 4548 aa7.66□□□□□ -1.18
CLK3-218ENST00000566926 IGLV7-46A0A075B6I9 117 aa7.66□□□□□ -1.18
CLK3-218ENST00000566926 FP248Q71RG6 208 aaPredicted RBP7.66□□□□□ -1.18
CLK3-218ENST00000566926 A0A0G2JQZ4 141 aa7.65□□□□□ -1.18
CLK3-218ENST00000566926 Q6ZVQ6 151 aa7.65□□□□□ -1.18
CLK3-218ENST00000566926 TPRXLQ17RH7 258 aa7.64□□□□□ -1.19
CLK3-218ENST00000566926 Q5XG85 94 aa7.64□□□□□ -1.19
CLK3-218ENST00000566926 LIMD2Q9BT23 127 aa7.64□□□□□ -1.19
CLK3-218ENST00000566926 CXCL6P80162 114 aa7.63□□□□□ -1.19
CLK3-218ENST00000566926 ASB16-AS1Q495Z4 193 aa7.61□□□□□ -1.19
CLK3-218ENST00000566926 J3KT08 172 aa7.6□□□□□ -1.19
CLK3-218ENST00000566926 HRCT1Q6UXD1 115 aa7.6□□□□□ -1.19
CLK3-218ENST00000566926 BPY2O14599 106 aa7.59□□□□□ -1.19
CLK3-218ENST00000566926 SIGMAR1Q99720 223 aa7.59□□□□□ -1.19
CLK3-218ENST00000566926 IMUPQ9GZP8 106 aa7.59□□□□□ -1.19
CLK3-218ENST00000566926 RNF213Q63HN8 5207 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms