RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 K7EP13 123 aa1.78□□□□□ -2.12
CNOT1-209ENST00000566240 IGHV3-33P01772 117 aa1.78□□□□□ -2.12
CNOT1-209ENST00000566240 KRTAP21-3Q3LHN1 58 aa1.78□□□□□ -2.12
CNOT1-209ENST00000566240 OCIAD2Q56VL3 154 aa1.78□□□□□ -2.12
CNOT1-209ENST00000566240 S100A7L2Q5SY68 101 aa1.78□□□□□ -2.12
CNOT1-209ENST00000566240 C5orf38Q86SI9 138 aa1.78□□□□□ -2.12
CNOT1-209ENST00000566240 PRR15Q8IV56 129 aa1.78□□□□□ -2.12
CNOT1-209ENST00000566240 LINC00269Q8N2A0 174 aa1.78□□□□□ -2.12
CNOT1-209ENST00000566240 LINC00308Q8TCZ7 52 aa1.78□□□□□ -2.12
CNOT1-209ENST00000566240 PPDPFLQ8WWR9 84 aa1.78□□□□□ -2.12
CNOT1-209ENST00000566240 LRRK2Q5S007 2527 aa1.78□□□□□ -2.12
CNOT1-209ENST00000566240 DCHS2Q6V1P9 2916 aa1.77□□□□□ -2.13
CNOT1-209ENST00000566240 NBEAQ8NFP9 2946 aa1.77□□□□□ -2.13
CNOT1-209ENST00000566240 FLNAP21333 2647 aaKnown RBP1.77□□□□□ -2.13
CNOT1-209ENST00000566240 PTPN13Q12923 2485 aa1.77□□□□□ -2.13
CNOT1-209ENST00000566240 COL12A1Q99715 3063 aa1.77□□□□□ -2.13
CNOT1-209ENST00000566240 NUPR2A6NF83 97 aa1.77□□□□□ -2.13
CNOT1-209ENST00000566240 H0YGX0 51 aa1.77□□□□□ -2.13
CNOT1-209ENST00000566240 COX6A2Q02221 97 aa1.77□□□□□ -2.13
CNOT1-209ENST00000566240 C2orf82Q6UX34 121 aa1.77□□□□□ -2.13
CNOT1-209ENST00000566240 TEN1Q86WV5 123 aa1.77□□□□□ -2.13
CNOT1-209ENST00000566240 USP9YO00507 2555 aaPredicted RBP1.77□□□□□ -2.13
CNOT1-209ENST00000566240 RELNP78509 3460 aa1.76□□□□□ -2.13
CNOT1-209ENST00000566240 FBN2P35556 2912 aa1.76□□□□□ -2.13
CNOT1-209ENST00000566240 TRACP01848 142 aa1.76□□□□□ -2.13
CNOT1-209ENST00000566240 CNBPP62633 177 aaKnown RBP1.76□□□□□ -2.13
CNOT1-209ENST00000566240 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
CNOT1-209ENST00000566240 ETDBQ3ZM63 59 aa1.76□□□□□ -2.13
CNOT1-209ENST00000566240 LINC01556Q5JQF7 62 aa1.76□□□□□ -2.13
CNOT1-209ENST00000566240 LYPD5Q6UWN5 251 aa1.76□□□□□ -2.13
CNOT1-209ENST00000566240 PHF5AQ7RTV0 110 aaKnown RBP1.76□□□□□ -2.13
CNOT1-209ENST00000566240 DIRC1Q969H9 104 aa1.76□□□□□ -2.13
CNOT1-209ENST00000566240 ORMDL1Q9P0S3 153 aa1.76□□□□□ -2.13
CNOT1-209ENST00000566240 SONP18583 2426 aaKnown RBP1.76□□□□□ -2.13
CNOT1-209ENST00000566240 UTP20O75691 2785 aaKnown RBP1.76□□□□□ -2.13
CNOT1-209ENST00000566240 ABCA12Q86UK0 2595 aa1.75□□□□□ -2.13
CNOT1-209ENST00000566240 EPG5Q9HCE0 2579 aa1.75□□□□□ -2.13
CNOT1-209ENST00000566240 ZFYVE26Q68DK2 2539 aa1.75□□□□□ -2.13
CNOT1-209ENST00000566240 A0A1B0GX51 115 aa1.75□□□□□ -2.13
CNOT1-209ENST00000566240 NCR3O14931 201 aa1.75□□□□□ -2.13
CNOT1-209ENST00000566240 ACYP1P07311 99 aa1.75□□□□□ -2.13
CNOT1-209ENST00000566240 C1orf134Q5TEV5 83 aa1.75□□□□□ -2.13
CNOT1-209ENST00000566240 Q6ZSA8 131 aa1.75□□□□□ -2.13
CNOT1-209ENST00000566240 WFDC10BQ8IUB3 73 aa1.75□□□□□ -2.13
CNOT1-209ENST00000566240 Q8N814 137 aa1.75□□□□□ -2.13
CNOT1-209ENST00000566240 POLQO75417 2590 aa1.75□□□□□ -2.13
CNOT1-209ENST00000566240 CCDC168Q8NDH2 2452 aa1.75□□□□□ -2.13
CNOT1-209ENST00000566240 CFAP46Q8IYW2 2715 aa1.74□□□□□ -2.13
CNOT1-209ENST00000566240 TRAV23DV6A0A075B6W5 121 aa1.74□□□□□ -2.13
CNOT1-209ENST00000566240 GVQW2A0A096LPI5 108 aaPredicted RBP1.74□□□□□ -2.13
CNOT1-209ENST00000566240 JMJD7-PLA2G4BH0Y9G9 81 aa1.74□□□□□ -2.13
CNOT1-209ENST00000566240 SCGB1A1P11684 91 aa1.74□□□□□ -2.13
CNOT1-209ENST00000566240 WFDC2Q14508 124 aa1.74□□□□□ -2.13
CNOT1-209ENST00000566240 CLEC2BQ92478 149 aa1.74□□□□□ -2.13
CNOT1-209ENST00000566240 LAMA5O15230 3695 aa1.74□□□□□ -2.13
CNOT1-209ENST00000566240 APCP25054 2843 aa1.74□□□□□ -2.13
CNOT1-209ENST00000566240 MYO9AB2RTY4 2548 aa1.74□□□□□ -2.13
CNOT1-209ENST00000566240 FASNP49327 2511 aaKnown RBP1.74□□□□□ -2.13
CNOT1-209ENST00000566240 CRYBG3Q68DQ2 2970 aa1.73□□□□□ -2.13
CNOT1-209ENST00000566240 LOC107984640A0A0U1RRK4 108 aa1.73□□□□□ -2.13
CNOT1-209ENST00000566240 K7EIL1 84 aa1.73□□□□□ -2.13
CNOT1-209ENST00000566240 ENHOQ6UWT2 76 aa1.73□□□□□ -2.13
CNOT1-209ENST00000566240 SMIM11BQ8TCY0 68 aa1.73□□□□□ -2.13
CNOT1-209ENST00000566240 TLN2Q9Y4G6 2542 aa1.73□□□□□ -2.13
CNOT1-209ENST00000566240 FLNCQ14315 2725 aa1.73□□□□□ -2.13
CNOT1-209ENST00000566240 TACC2O95359 2948 aa1.73□□□□□ -2.13
CNOT1-209ENST00000566240 ASH1LQ9NR48 2969 aaKnown RBP1.72□□□□□ -2.13
CNOT1-209ENST00000566240 LOC110117498A0A087WWA1 95 aa1.72□□□□□ -2.13
CNOT1-209ENST00000566240 TRBV7-6A0A0J9YX20 115 aa1.72□□□□□ -2.13
CNOT1-209ENST00000566240 ETDCA0A1B0GVM5 59 aa1.72□□□□□ -2.13
CNOT1-209ENST00000566240 hADV29S1A0JD25 119 aa1.72□□□□□ -2.13
CNOT1-209ENST00000566240 F8WEM9 126 aa1.72□□□□□ -2.13
CNOT1-209ENST00000566240 ERC2-IT1O76042 136 aa1.72□□□□□ -2.13
CNOT1-209ENST00000566240 PDE6GP18545 87 aa1.72□□□□□ -2.13
CNOT1-209ENST00000566240 COX7BP24311 80 aa1.72□□□□□ -2.13
CNOT1-209ENST00000566240 ATP5EP2Q5VTU8 51 aa1.72□□□□□ -2.13
CNOT1-209ENST00000566240 DSCR8Q96T75 97 aa1.72□□□□□ -2.13
CNOT1-209ENST00000566240 CDC42SE1Q9NRR8 79 aa1.72□□□□□ -2.13
CNOT1-209ENST00000566240 LINC00474Q9P2X8 69 aa1.72□□□□□ -2.13
CNOT1-209ENST00000566240 C6orf48Q9UBA6 75 aa1.72□□□□□ -2.13
CNOT1-209ENST00000566240 PDZD2O15018 2839 aa1.72□□□□□ -2.13
CNOT1-209ENST00000566240 CELSR1Q9NYQ6 3014 aa1.72□□□□□ -2.13
CNOT1-209ENST00000566240 UNC79Q9P2D8 2635 aa1.71□□□□□ -2.13
CNOT1-209ENST00000566240 TEX15Q9BXT5 2789 aa1.71□□□□□ -2.14
CNOT1-209ENST00000566240 C2CD3Q4AC94 2353 aa1.71□□□□□ -2.14
CNOT1-209ENST00000566240 A0A087WSZ3 146 aa1.71□□□□□ -2.14
CNOT1-209ENST00000566240 TEX49A0A1B0GTD5 131 aa1.71□□□□□ -2.14
CNOT1-209ENST00000566240 C9orf116Q5BN46 136 aaPredicted RBP1.71□□□□□ -2.14
CNOT1-209ENST00000566240 LINC01600Q96MT4 127 aa1.71□□□□□ -2.14
CNOT1-209ENST00000566240 UBL5Q9BZL1 73 aa1.71□□□□□ -2.14
CNOT1-209ENST00000566240 HELZ2Q9BYK8 2649 aaKnown RBP1.71□□□□□ -2.14
CNOT1-209ENST00000566240 F8P00451 2351 aa1.71□□□□□ -2.14
CNOT1-209ENST00000566240 TENM4Q6N022 2769 aa1.7□□□□□ -2.14
CNOT1-209ENST00000566240 CELSR2Q9HCU4 2923 aa1.7□□□□□ -2.14
CNOT1-209ENST00000566240 ACANP16112 2415 aa1.7□□□□□ -2.14
CNOT1-209ENST00000566240 TRBV10-3A0A0K0K1G6 114 aa1.7□□□□□ -2.14
CNOT1-209ENST00000566240 hDV103S1A0JD37 113 aa1.7□□□□□ -2.14
CNOT1-209ENST00000566240 M0R2N4 97 aa1.7□□□□□ -2.14
CNOT1-209ENST00000566240 ELOF1P60002 83 aaKnown RBP1.7□□□□□ -2.14
CNOT1-209ENST00000566240 RBM3P98179 157 aaKnown RBP1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms