RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 ANAPC11Q9NYG5 84 aa4.66□□□□□ -1.66
CDH1-208ENST00000565810 SRRM2Q9UQ35 2752 aaKnown RBP4.65□□□□□ -1.66
CDH1-208ENST00000565810 TMEM256-PLSCR3K7ERE1 68 aa4.65□□□□□ -1.67
CDH1-208ENST00000565810 KRTAP1-4P0C5Y4 121 aa4.65□□□□□ -1.67
CDH1-208ENST00000565810 GTF2H5Q6ZYL4 71 aa4.65□□□□□ -1.67
CDH1-208ENST00000565810 Q8N377 158 aa4.65□□□□□ -1.67
CDH1-208ENST00000565810 LRP1Q07954 4544 aaKnown RBP4.65□□□□□ -1.67
CDH1-208ENST00000565810 F8WEM9 126 aa4.64□□□□□ -1.67
CDH1-208ENST00000565810 OXTP01178 125 aa4.64□□□□□ -1.67
CDH1-208ENST00000565810 BAALC-AS2P0C853 105 aa4.64□□□□□ -1.67
CDH1-208ENST00000565810 LINC01547P58512 204 aaPredicted RBP4.64□□□□□ -1.67
CDH1-208ENST00000565810 LINC01600Q96MT4 127 aa4.64□□□□□ -1.67
CDH1-208ENST00000565810 IGLV9-49A0A0B4J1Y8 123 aa4.63□□□□□ -1.67
CDH1-208ENST00000565810 C9JAW5 83 aa4.63□□□□□ -1.67
CDH1-208ENST00000565810 H3BMG7 143 aa4.63□□□□□ -1.67
CDH1-208ENST00000565810 K7EP34 96 aa4.63□□□□□ -1.67
CDH1-208ENST00000565810 C9orf153Q5TBE3 101 aa4.63□□□□□ -1.67
CDH1-208ENST00000565810 TYMSOSQ8TAI1 123 aa4.63□□□□□ -1.67
CDH1-208ENST00000565810 MYCBP2O75592 4640 aa4.63□□□□□ -1.67
CDH1-208ENST00000565810 TNXBP22105 4242 aa4.62□□□□□ -1.67
CDH1-208ENST00000565810 A0A087X002 238 aa4.62□□□□□ -1.67
CDH1-208ENST00000565810 UBE2V1Q13404 147 aa4.62□□□□□ -1.67
CDH1-208ENST00000565810 PRR26Q8N8Z3 221 aa4.62□□□□□ -1.67
CDH1-208ENST00000565810 NDUFV3P56181 108 aaKnown RBP4.61□□□□□ -1.67
CDH1-208ENST00000565810 MOBPQ13875 183 aa4.61□□□□□ -1.67
CDH1-208ENST00000565810 SSBP3-AS1Q7Z2R9 100 aa4.61□□□□□ -1.67
CDH1-208ENST00000565810 SMIM29Q86T20 159 aa4.61□□□□□ -1.67
CDH1-208ENST00000565810 C3orf22Q8N5N4 141 aa4.61□□□□□ -1.67
CDH1-208ENST00000565810 KRTAP29-1A8MX34 341 aaPredicted RBP4.6□□□□□ -1.67
CDH1-208ENST00000565810 H3BT86 120 aa4.6□□□□□ -1.67
CDH1-208ENST00000565810 C4orf48Q5BLP8 95 aa4.6□□□□□ -1.67
CDH1-208ENST00000565810 ANKRD29Q8N6D5 301 aa4.6□□□□□ -1.67
CDH1-208ENST00000565810 Q8NBF4 154 aa4.6□□□□□ -1.67
CDH1-208ENST00000565810 ABCA13Q86UQ4 5058 aa4.59□□□□□ -1.67
CDH1-208ENST00000565810 J3QL48 77 aa4.59□□□□□ -1.67
CDH1-208ENST00000565810 KRTAP13-2Q52LG2 175 aa4.59□□□□□ -1.67
CDH1-208ENST00000565810 Q6JHZ5 121 aa4.59□□□□□ -1.67
CDH1-208ENST00000565810 JMJD7-PLA2G4BH0Y9G9 81 aa4.58□□□□□ -1.68
CDH1-208ENST00000565810 KRTAP10-8P60410 259 aa4.58□□□□□ -1.68
CDH1-208ENST00000565810 RBM3P98179 157 aaKnown RBP4.58□□□□□ -1.68
CDH1-208ENST00000565810 MTURNQ8N3F0 131 aa4.58□□□□□ -1.68
CDH1-208ENST00000565810 IGLV8-61A0A075B6I0 122 aa4.57□□□□□ -1.68
CDH1-208ENST00000565810 A0A1B0GV90 55 aa4.57□□□□□ -1.68
CDH1-208ENST00000565810 F8W1H4 67 aa4.57□□□□□ -1.68
CDH1-208ENST00000565810 SPAG11AQ6PDA7 123 aa4.57□□□□□ -1.68
CDH1-208ENST00000565810 DSCR8Q96T75 97 aa4.57□□□□□ -1.68
CDH1-208ENST00000565810 FLG2Q5D862 2391 aaPredicted RBP4.57□□□□□ -1.68
CDH1-208ENST00000565810 A0A1B0GV72 72 aa4.56□□□□□ -1.68
CDH1-208ENST00000565810 LINC00304Q8N9R0 145 aa4.56□□□□□ -1.68
CDH1-208ENST00000565810 IGFL1Q6UW32 110 aa4.55□□□□□ -1.68
CDH1-208ENST00000565810 SPINK1P00995 79 aa4.54□□□□□ -1.68
CDH1-208ENST00000565810 MT1HL1P0DM35 61 aa4.54□□□□□ -1.68
CDH1-208ENST00000565810 PDE6GP18545 87 aa4.54□□□□□ -1.68
CDH1-208ENST00000565810 CD164Q04900 197 aa4.54□□□□□ -1.68
CDH1-208ENST00000565810 C21orf62-AS1Q17RA5 79 aa4.54□□□□□ -1.68
CDH1-208ENST00000565810 LCE2CQ5TA81 110 aa4.54□□□□□ -1.68
CDH1-208ENST00000565810 HRCT1Q6UXD1 115 aa4.54□□□□□ -1.68
CDH1-208ENST00000565810 KRTAP4-8Q9BYQ9 185 aa4.54□□□□□ -1.68
CDH1-208ENST00000565810 PRO0461Q9UI25 63 aa4.54□□□□□ -1.68
CDH1-208ENST00000565810 SMCPP49901 116 aaPredicted RBP4.53□□□□□ -1.68
CDH1-208ENST00000565810 PCLOQ9Y6V0 5065 aa4.53□□□□□ -1.68
CDH1-208ENST00000565810 A0A0G2JQZ4 141 aa4.52□□□□□ -1.69
CDH1-208ENST00000565810 TRBV7-4A0A0J9YYF1 115 aa4.52□□□□□ -1.69
CDH1-208ENST00000565810 TEN1Q86WV5 123 aa4.52□□□□□ -1.69
CDH1-208ENST00000565810 OBSCN-AS1Q96MR7 158 aa4.52□□□□□ -1.69
CDH1-208ENST00000565810 VPS25Q9BRG1 176 aa4.52□□□□□ -1.69
CDH1-208ENST00000565810 LIMD2Q9BT23 127 aa4.52□□□□□ -1.69
CDH1-208ENST00000565810 CCKP06307 115 aa4.51□□□□□ -1.69
CDH1-208ENST00000565810 RPS29P62273 56 aaKnown RBP4.51□□□□□ -1.69
CDH1-208ENST00000565810 C14orf132Q9NPU4 83 aa4.51□□□□□ -1.69
CDH1-208ENST00000565810 LOC110117498A0A087WWA1 95 aa4.5□□□□□ -1.69
CDH1-208ENST00000565810 TRBV7-7A0A0K0K1E9 115 aa4.5□□□□□ -1.69
CDH1-208ENST00000565810 LORP23490 312 aaPredicted RBP4.5□□□□□ -1.69
CDH1-208ENST00000565810 ETDBQ3ZM63 59 aa4.5□□□□□ -1.69
CDH1-208ENST00000565810 Q6Q795 121 aa4.5□□□□□ -1.69
CDH1-208ENST00000565810 A0A1W2PNM2 257 aa4.49□□□□□ -1.69
CDH1-208ENST00000565810 XP32Q5T750 250 aa4.49□□□□□ -1.69
CDH1-208ENST00000565810 Q6ZQT0 140 aa4.49□□□□□ -1.69
CDH1-208ENST00000565810 SS18L2Q9UHA2 77 aa4.49□□□□□ -1.69
CDH1-208ENST00000565810 A0A087WSZ3 146 aa4.48□□□□□ -1.69
CDH1-208ENST00000565810 A0A1B0GW54 56 aa4.48□□□□□ -1.69
CDH1-208ENST00000565810 Q5XG85 94 aa4.47□□□□□ -1.69
CDH1-208ENST00000565810 DMBT1Q9UGM3 2413 aaPredicted RBP4.46□□□□□ -1.7
CDH1-208ENST00000565810 ASB16-AS1Q495Z4 193 aa4.44□□□□□ -1.7
CDH1-208ENST00000565810 HERC1Q15751 4861 aa4.43□□□□□ -1.7
CDH1-208ENST00000565810 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.43□□□□□ -1.7
CDH1-208ENST00000565810 KRTAP9-2Q9BYQ4 174 aa4.43□□□□□ -1.7
CDH1-208ENST00000565810 J3QR89 54 aa4.42□□□□□ -1.7
CDH1-208ENST00000565810 PRR4Q16378 134 aa4.42□□□□□ -1.7
CDH1-208ENST00000565810 NREPQ16612 68 aa4.42□□□□□ -1.7
CDH1-208ENST00000565810 FP248Q71RG6 208 aaPredicted RBP4.42□□□□□ -1.7
CDH1-208ENST00000565810 RETNLBQ9BQ08 111 aa4.42□□□□□ -1.7
CDH1-208ENST00000565810 ACYP1P07311 99 aa4.41□□□□□ -1.7
CDH1-208ENST00000565810 C1orf195Q5TG92 126 aa4.41□□□□□ -1.7
CDH1-208ENST00000565810 KRTAP9-6A0A140TA67 174 aa4.4□□□□□ -1.71
CDH1-208ENST00000565810 UBL5Q9BZL1 73 aa4.4□□□□□ -1.71
CDH1-208ENST00000565810 IGLV7-46A0A075B6I9 117 aa4.39□□□□□ -1.71
CDH1-208ENST00000565810 J3KT08 172 aa4.39□□□□□ -1.71
CDH1-208ENST00000565810 LINC00472Q9H8W2 130 aa4.39□□□□□ -1.71
CDH1-208ENST00000565810 FAM240AA0A1B0GVK7 77 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms